Reviewed, UniProtKB/Swiss-Prot P38732 (YHD9_YEAST)

Names and origin

Protein names

Recommended name:
    Uncharacterized protein YHL039W

Gene names

Ordered Locus Names:

YHL039W

Organism

Saccharomyces cerevisiae (Baker's yeast) [Complete proteome]

Taxonomic identifier

4932 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces

Protein attributes

Sequence length	585 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Subcellular location	Cytoplasm.
Miscellaneous	Present with 5170 molecules/cell in log phase SD medium. Ref.3
Sequence similarities	Contains 1 SET domain.

Ontologies

Keywords
Cellular component	Cytoplasm
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	cytoplasm Ref.2 Inferred from direct assay. Source: SGD
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 585	585	Uncharacterized protein YHL039W		PRO_0000202879
Regions
	Domain	8 – 287	280	SET

Sequences

	Sequence		Length	Mass (Da)
	P38732-1 [UniParc]. Last modified February 1, 1995. Version 1. Checksum: 84BC2D3A204D9D29	FASTA	585	67,452
	10 20 30 40 50 60 MITQTELDNC LQWAQNNGAF IDPKISFRIT EDAGVSAFVN EKFSPKPDQA LIRVPETLLI 70 80 90 100 110 120 TSQQALSEFS QAANERSLLN SVTQLYLSKL KFGTDAVHLK SFYKPYLDVL PLHLPQPYFW 130 140 150 160 170 180 STDEVMNLHG TDVYLTMRDT LNKLVKEWRM LFQALSIEHS SQDKQFLSLF QENKDSAVVP 190 200 210 220 230 240 LEQFCAHING CKLEDSEWNS FVAYLWSYCI FNSRAFPRVI LGRAGTDRTN LNEGFLYPIV 250 260 270 280 290 300 DLLNHKNDVP VRWEMNEQNE LCFMSQTTTF SAQDELFNNY GNISNEKCLL NYGFWDSSNK 310 320 330 340 350 360 FDFSRLTLKL PSTLVSGLPV DFNKSGNFVT DDGETTILQF SLKISEPLPP VLLALFAYLS 370 380 390 400 410 420 KLKSEETPTV RSVLEGIDQL TSVVSQRLLF YKNFKIKTSS TQKLRPHVIK LIKLYYQDNK 430 440 450 460 470 480 KILNATTEKL SVLQKKIYSN NKEFSLSFKT IFKNDKIFAN SLLLVFGAIN YEDLITKDCL 490 500 510 520 530 540 NDALLLWIVK LINDKSNNQG GFIKQTFKEV SDSIVIEKED VMEFLPFYKK YFPNLSERIP 550 560 570 580 EIYSVGDWGI RQFIVADTAI DRLVWIRKSN KEPIFLMKKA YDLQI

References

[1]	"Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII." Johnston M., Andrews S., Brinkman R., Cooper J., Ding H., Dover J., Du Z., Favello A., Fulton L., Gattung S., Geisel C., Kirsten J., Kucaba T., Hillier L.W., Jier M., Johnston L., Langston Y., Latreille P. , Louis E.J., Macri C., Mardis E., Menezes S., Mouser L., Nhan M., Rifkin L., Riles L., St Peter H., Trevaskis E., Vaughan K., Vignati D., Wilcox L., Wohldman P., Waterston R., Wilson R., Vaudin M. Science 265:2077-2082(1994) [PubMed: 8091229] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204511 / S288c / AB972.
[2]	"Global analysis of protein localization in budding yeast." Huh W.-K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W., Weissman J.S., O'Shea E.K. Nature 425:686-691(2003) [PubMed: 14562095] [Abstract] Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
[3]	"Global analysis of protein expression in yeast." Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S. Nature 425:737-741(2003) [PubMed: 14562106] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	U11583 Genomic DNA. Translation: AAB65051.1.
PIR	S48929.
RefSeq	NP_011824.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
DIP	DIP:6582N.
IntAct	P38732. 2 interactions.
STRING	P38732.
Proteomic databases
PeptideAtlas	P38732.
Genome annotation databases
Ensembl	YHL039W; YHL039W; YHL039W; Saccharomyces cerevisiae. [Genome view]
GeneID	856346.
KEGG	sce:YHL039W.
NMPDR	fig|4932.3.peg.2960.
Organism-specific databases
CYGD	YHL039w.
SGD	S000001031. YHL039W.
Phylogenomic databases
HOGENOM	P38732.
OMA	IFSSRAF
OrthoDB	EOG9S7M6N
Gene expression databases
ArrayExpress	P38732.
Genevestigator	P38732.
GermOnline	YHL039W. Saccharomyces cerevisiae.
Family and domain databases
InterPro	IPR017119. Ribosomal_Lys-MeTrfase-1. IPR001214. SET. [Graphical view]
Pfam	PF00856. SET. 1 hit. [Graphical view]
PIRSF	PIRSF037136. Ribosomal_Lys-mtfrase-1. 1 hit.
PROSITE	PS50280. SET. False negative. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	981778.

Entry information

Entry name

YHD9_YEAST

Accession

Primary (citable) accession number: P38732

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 1, 1995
Last sequence update:	February 1, 1995
Last modified:	November 24, 2009
This is version 60 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

FPAP (Fungal Proteome Annotation Project)