Reviewed,
UniProtKB/Swiss-Prot P38649 (BGAT_MOUSE)
Last modified
January 19, 2010.
Version 59.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Histo-blood group ABO system transferase Alternative name(s): NAGAT Cis-AB transferase Glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase EC=2.4.1.40 Fucosylglycoprotein alpha-N-acetylgalactosaminyltransferase Histo-blood group A transferase Short name=A transferase Glycoprotein-fucosylgalactoside alpha-galactosyltransferase EC=2.4.1.37 Fucosylglycoprotein 3-alpha-galactosyltransferase Histo-blood group B transferase Short name=B transferase | ||
| Gene names |
| ||
| Organism | Mus musculus (Mouse) | ||
| Taxonomic identifier | 10090 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus |
Protein attributes
| Sequence length | 332 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Catalytic activity | UDP-N-acetyl-D-galactosamine + glycoprotein-alpha-L-fucosyl-(1->2)-D-galactose = UDP + glycoprotein-N-acetyl-alpha-D-galactosaminyl-(1->3)-(alpha-L-fucosyl-(1->2))-D-galactose. UDP-galactose + alpha-L-fucosyl-(1->2)-D-galactosyl-R = UDP + alpha-D-galactosyl-(1->3)-(alpha-L-fucosyl-(1->2))-D-galactosyl-R. |
| Cofactor | Binds 1 manganese ion per subunit By similarity. |
| Pathway | |
| Subcellular location | Golgi apparatus › Golgi stack membrane; Single-pass type II membrane protein. Secreted. Note: Membrane-bound form in trans cisternae of Golgi. Secreted into the body fluid By similarity. |
| Tissue specificity | Submaxillary glands (at protein level). Ref.1 |
| Domain | The conserved DXD motif is involved in cofactor binding. The manganese ion interacts with the beta-phosphate group of UDP and may also have a role in catalysis. |
| Sequence similarities | Belongs to the glycosyltransferase 6 family. |
| Sequence caution | The sequence CAM23695.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Golgi apparatus Membrane Secreted |
| Domain | Signal-anchor Transmembrane |
| Ligand | Manganese Metal-binding |
| Molecular function | Glycosyltransferase Transferase |
| PTM | Glycoprotein |
| Technical term | Direct protein sequencing |
| Gene Ontology (GO) | |
| Biological process | carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro |
| Cellular component | Golgi apparatus Inferred from electronic annotation. Source: UniProtKB-KW extracellular regionInferred from electronic annotation. Source: UniProtKB-SubCell integral to membraneInferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | fucosylgalactoside 3-alpha-galactosyltransferase activity Ref.1 Inferred from direct assay. Source: MGI glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase activity Ref.1Inferred from direct assay. Source: MGI manganese ion bindingInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 332 | 332 | Histo-blood group ABO system transferase | PRO_0000157293 | |||||
Regions | |||||||||
| Topological domain | 1 – 13 | 13 | Cytoplasmic Potential | ||||||
| Transmembrane | 14 – 34 | 21 | Signal-anchor for type II membrane protein Potential | ||||||
| Topological domain | 35 – 332 | 298 | Lumenal Potential | ||||||
| Region | 100 – 102 | 3 | UDP-N-acetyl-galactosamine binding By similarity | ||||||
| Region | 190 – 192 | 3 | UDP-N-acetyl-galactosamine binding By similarity | ||||||
Sites | |||||||||
| Metal binding | 190 | 1 | Manganese By similarity | ||||||
| Metal binding | 192 | 1 | Manganese By similarity | ||||||
| Binding site | 105 | 1 | UDP-N-acetyl-galactosamine By similarity | ||||||
| Binding site | 212 | 1 | Glycoprotein fucosyl-galactosyl group By similarity | ||||||
| Binding site | 224 | 1 | Glycoprotein fucosyl-galactosyl group By similarity | ||||||
| Binding site | 282 | 1 | Glycoprotein fucosyl-galactosyl group By similarity | ||||||
| Binding site | 305 | 1 | Glycoprotein fucosyl-galactosyl group By similarity | ||||||
Amino acid modifications | |||||||||
| Glycosylation | 92 | 1 | N-linked (GlcNAc...) Potential | ||||||
Experimental info | |||||||||
| Sequence conflict | 77 | 1 | G → R in BAC29005. Ref.2 | ||||||
| Sequence conflict | 109 | 1 | L → I in BAC29005. Ref.2 | ||||||
| Sequence conflict | 160 | 1 | W → C in BAC28473. Ref.2 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Murine equivalent of the human histo-blood group ABO gene is a cis-AB gene and encodes a glycosyltransferase with both A and B transferase activity." Yamamoto M., Lin X.-H., Kominato Y., Hata Y., Noda R., Saitou N., Yamamoto F. J. Biol. Chem. 276:13701-13708(2001) [PubMed: 11278752] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], TISSUE SPECIFICITY. |
| [2] | "The transcriptional landscape of the mammalian genome." Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. Hayashizaki Y.Science 309:1559-1563(2005) [PubMed: 16141072] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: C57BL/6J. Tissue: Epididymis and Urinary bladder. |
| [3] | "Lineage-specific biology revealed by a finished genome assembly of the mouse." Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. Ponting C.P.PLoS Biol. 7:E1000112-E1000112(2009) [PubMed: 19468303] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C57BL/6J. |
| [4] | Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C. Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Testis. |
| [6] | "Separation and sequencing of familiar and novel murine proteins using preparative two-dimensional gel electrophoresis." Merrick B.A., Patterson R.M., Wichter L.L., He C., Selkirk J.K. Electrophoresis 15:735-745(1994) [PubMed: 7523108] [Abstract] Cited for: PRELIMINARY PARTIAL PROTEIN SEQUENCE. Tissue: Fibroblast. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AB041038 Genomic DNA. Translation: BAB20559.1. AB041039 mRNA. Translation: BAB20560.1. AK033786 mRNA. Translation: BAC28473.1. AK035261 mRNA. Translation: BAC29005.1. AL773563 Genomic DNA. Translation: CAM23695.1. Sequence problems. AL773563 Genomic DNA. Translation: CAM23696.1. CH466542 Genomic DNA. Translation: EDL08332.1. BC116759 mRNA. Translation: AAI16760.1. BC116761 mRNA. Translation: AAI16762.1. |
| IPI | IPI00331267. |
| RefSeq | NP_109643.3. |
| UniGene | Mm.160386 |
3D structure databases | |
| SMR | P38649. Positions 44-332. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | P38649. |
Protein family/group databases | |
| CAZy | GT6. Glycosyltransferase Family 6. |
Proteomic databases | |
| PRIDE | P38649. |
Genome annotation databases | |
| Ensembl | ENSMUST00000102900; ENSMUSP00000099964; ENSMUSG00000015787; Mus musculus. [Genome view] |
| GeneID | 80908. |
| KEGG | mmu:80908. |
Organism-specific databases | |
| CTD | 80908. |
| MGI | MGI:2135738. Abo. |
Phylogenomic databases | |
| eggNOG | maNOG16072. |
| HOVERGEN | P38649. |
| PhylomeDB | P38649. |
Enzyme and pathway databases | |
| BRENDA | 2.4.1.37. 244. 2.4.1.40. 244. |
Gene expression databases | |
| ArrayExpress | P38649. |
| Bgee | P38649. |
| Genevestigator | P38649. |
Family and domain databases | |
| InterPro | IPR005076. Glyco_trans_6. [Graphical view] |
| PANTHER | PTHR10462. Glyco_trans_6. 1 hit. |
| Pfam | PF03414. Glyco_transf_6. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| SOURCE | Search... |
Entry information
| Entry name | BGAT_MOUSE | ||||||||
| Accession | Primary (citable) accession number: P38649 Secondary accession number(s): A2AL98 Q9EQW3 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
Relevant documents
| MGD cross-references Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with


