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P38563

- GLNA5_MAIZE

UniProt

P38563 - GLNA5_MAIZE

Protein

Glutamine synthetase root isozyme 5

Gene

GS1-5

Organism
Zea mays (Maize)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 81 (01 Oct 2014)
      Sequence version 2 (01 Nov 1995)
      Previous versions | rss
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    Functioni

    Plays a role in the flow of nitrogen into nitrogenous organic compounds.

    Catalytic activityi

    ATP + L-glutamate + NH3 = ADP + phosphate + L-glutamine.

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. glutamate-ammonia ligase activity Source: UniProtKB-EC

    GO - Biological processi

    1. glutamine biosynthetic process Source: InterPro

    Keywords - Molecular functioni

    Ligase

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamine synthetase root isozyme 5 (EC:6.3.1.2)
    Alternative name(s):
    GS117
    Glutamate--ammonia ligase
    Gene namesi
    Name:GS1-5
    OrganismiZea mays (Maize)
    Taxonomic identifieri4577 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeZea

    Organism-specific databases

    GrameneiP38563.
    MaizeGDBi17151.

    Subcellular locationi

    GO - Cellular componenti

    1. chloroplast Source: EnsemblPlants/Gramene
    2. plasmodesma Source: EnsemblPlants/Gramene

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 357357Glutamine synthetase root isozyme 5PRO_0000153182Add
    BLAST

    Proteomic databases

    PRIDEiP38563.

    Expressioni

    Tissue specificityi

    Found mainly in the cortical tissues of seedling roots, stem and seedling shoot.

    Interactioni

    Subunit structurei

    Homooctamer.

    Structurei

    3D structure databases

    ProteinModelPortaliP38563.
    SMRiP38563. Positions 4-355.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glutamine synthetase family.Curated

    Phylogenomic databases

    KOiK01915.

    Family and domain databases

    Gene3Di3.30.590.10. 1 hit.
    InterProiIPR008147. Gln_synt_beta.
    IPR014746. Gln_synth/guanido_kin_cat_dom.
    IPR008146. Gln_synth_cat_dom.
    IPR027303. Gln_synth_gly_rich_site.
    IPR027302. Gln_synth_N_conserv_site.
    [Graphical view]
    PfamiPF00120. Gln-synt_C. 1 hit.
    PF03951. Gln-synt_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF54368. SSF54368. 1 hit.
    PROSITEiPS00180. GLNA_1. 1 hit.
    PS00181. GLNA_ATP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P38563-1 [UniParc]FASTAAdd to Basket

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    MASLTDLVNL DLSDCTDKII AEYIWVGGSG IDLRSKARTV KGPITDPSQL    50
    PKWNYDGSST GQAPGEDSEV ILYPQAIFKD PFRKGNNILV MCDCYTPQGE 100
    PIPSNKRYKA ATVFSHPDVA AEVPWYGIEQ EYTLLQKDLS WPLGWPVGGY 150
    PGPQGPYYCA AGADKAFGRD VVDAHYKACL YAGINISGIN GEVMPGQWEF 200
    QVGPSVGISA GDEIWVARYI LERITEMAGI VLSLDPKPIK GDWNGAGAHT 250
    NYSTKSMREA GGYEVIKEAI EKLGRRHREH IAAYGEGNER RLTGRHETAD 300
    INTFKWGVAN RGASIRVGRD TEKEGKGYFE DRRPASNMDP YVVTGMIADT 350
    TILWKGN 357
    Length:357
    Mass (Da):39,259
    Last modified:November 1, 1995 - v2
    Checksum:i183F9C15F2FF33A6
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti139 – 1391L → V in CAA46723. (PubMed:8106013)Curated
    Sequence conflicti275 – 2751R → K in CAA46723. (PubMed:8106013)Curated
    Sequence conflicti285 – 2862GE → DG in CAA46723. (PubMed:8106013)Curated
    Sequence conflicti313 – 3131A → G in CAA46723. (PubMed:8106013)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D14578 mRNA. Translation: BAA03432.1. Sequence problems.
    X65930 mRNA. Translation: CAA46723.1.
    PIRiS39481.
    RefSeqiNP_001105297.1. NM_001111827.1.
    UniGeneiZm.15859.

    Genome annotation databases

    GeneIDi542215.
    KEGGizma:542215.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D14578 mRNA. Translation: BAA03432.1 . Sequence problems.
    X65930 mRNA. Translation: CAA46723.1 .
    PIRi S39481.
    RefSeqi NP_001105297.1. NM_001111827.1.
    UniGenei Zm.15859.

    3D structure databases

    ProteinModelPortali P38563.
    SMRi P38563. Positions 4-355.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi P38563.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 542215.
    KEGGi zma:542215.

    Organism-specific databases

    Gramenei P38563.
    MaizeGDBi 17151.

    Phylogenomic databases

    KOi K01915.

    Family and domain databases

    Gene3Di 3.30.590.10. 1 hit.
    InterProi IPR008147. Gln_synt_beta.
    IPR014746. Gln_synth/guanido_kin_cat_dom.
    IPR008146. Gln_synth_cat_dom.
    IPR027303. Gln_synth_gly_rich_site.
    IPR027302. Gln_synth_N_conserv_site.
    [Graphical view ]
    Pfami PF00120. Gln-synt_C. 1 hit.
    PF03951. Gln-synt_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54368. SSF54368. 1 hit.
    PROSITEi PS00180. GLNA_1. 1 hit.
    PS00181. GLNA_ATP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Molecular cloning of the family of glutamine synthetase genes from maize: expression of genes for glutamine synthetase and ferredoxin-dependent glutamate synthase in photosynthetic and non-photosynthetic tissues."
      Sakakibara H., Kawabata S., Takahashi H., Hase T., Sugiyama T.
      Plant Cell Physiol. 33:49-58(1992)
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: cv. Golden cross Bantam T51.
      Tissue: Leaf.
    2. "Differential expression of six glutamine synthetase genes in Zea mays."
      Li M.-G., Villemur R., Hussey P.J., Silflow C.D., Gantt J.S., Snustad D.P.
      Plant Mol. Biol. 23:401-407(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 113-357.
      Strain: cv. A188.
      Tissue: Seedling.

    Entry informationi

    Entry nameiGLNA5_MAIZE
    AccessioniPrimary (citable) accession number: P38563
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1994
    Last sequence update: November 1, 1995
    Last modified: October 1, 2014
    This is version 81 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3