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P38562

- GLNA4_MAIZE

UniProt

P38562 - GLNA4_MAIZE

Protein

Glutamine synthetase root isozyme 4

Gene

GLN5

Organism
Zea mays (Maize)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 78 (01 Oct 2014)
      Sequence version 1 (01 Oct 1994)
      Previous versions | rss
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    Functioni

    Plays a role in the flow of nitrogen into nitrogenous organic compounds.

    Catalytic activityi

    ATP + L-glutamate + NH3 = ADP + phosphate + L-glutamine.

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. glutamate-ammonia ligase activity Source: UniProtKB-EC

    GO - Biological processi

    1. glutamine biosynthetic process Source: InterPro

    Keywords - Molecular functioni

    Ligase

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BRENDAi6.3.1.2. 6752.
    SABIO-RKP38562.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamine synthetase root isozyme 4 (EC:6.3.1.2)
    Alternative name(s):
    GS107
    Glutamate--ammonia ligase
    Gene namesi
    Name:GLN5
    Synonyms:GS1-4
    OrganismiZea mays (Maize)
    Taxonomic identifieri4577 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeZea

    Organism-specific databases

    GrameneiP38562.
    MaizeGDBi17151.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 355355Glutamine synthetase root isozyme 4PRO_0000153181Add
    BLAST

    Proteomic databases

    PRIDEiP38562.

    Expressioni

    Tissue specificityi

    Found in all the tissues examined with higher expression found in tissues of the root, stem and seedling shoot.

    Interactioni

    Subunit structurei

    Homooctamer.

    Structurei

    3D structure databases

    ProteinModelPortaliP38562.
    SMRiP38562. Positions 3-354.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glutamine synthetase family.Curated

    Phylogenomic databases

    KOiK01915.

    Family and domain databases

    Gene3Di3.30.590.10. 1 hit.
    InterProiIPR008147. Gln_synt_beta.
    IPR014746. Gln_synth/guanido_kin_cat_dom.
    IPR008146. Gln_synth_cat_dom.
    IPR027303. Gln_synth_gly_rich_site.
    IPR027302. Gln_synth_N_conserv_site.
    [Graphical view]
    PfamiPF00120. Gln-synt_C. 1 hit.
    PF03951. Gln-synt_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF54368. SSF54368. 1 hit.
    PROSITEiPS00180. GLNA_1. 1 hit.
    PS00181. GLNA_ATP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P38562-1 [UniParc]FASTAAdd to Basket

    « Hide

    MACLTDLVNL NLSDTTEKII AEYIWIGGSG MDLRSKARTL PGPVTDPSKL    50
    PKWNYDGSST GQAPGEDSEV ILYPQAIFKD PFRRGNNILV MCDCYTPAGE 100
    PIPTNKRYSA AKIFSSPEVA AEEPWYGIEQ EYTLLQKDTN WPLGWPIGGF 150
    PGPQGPYYCG IGAEKSFGRD IVDAHYKACL YAGINISGIN GEVMPGQWEF 200
    QVGPSVGISS GDQVWVARYI LERITEIAGV VVTFDPKPIP GDWNGAGAHT 250
    NYSTESMRKE GGYEVIKAAI EKLKLRHKEH IAAYGEGNER RLTGRHETAD 300
    INTFSWGVAN RGASVAVGQT EQNGKGYFED RRPASNMDPY VVTSMIAETT 350
    IVWKP 355
    Length:355
    Mass (Da):38,981
    Last modified:October 1, 1994 - v1
    Checksum:i02F891F1209C50E5
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti316 – 3161A → R1 PublicationCurated
    Sequence conflicti319 – 3191Q → RE1 PublicationCurated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X65929 mRNA. Translation: CAA46722.1.
    D14576 mRNA. Translation: BAA03430.1.
    PIRiS39480.
    RefSeqiNP_001105444.1. NM_001111974.1.
    UniGeneiZm.45.

    Genome annotation databases

    GeneIDi542401.
    KEGGizma:542401.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X65929 mRNA. Translation: CAA46722.1 .
    D14576 mRNA. Translation: BAA03430.1 .
    PIRi S39480.
    RefSeqi NP_001105444.1. NM_001111974.1.
    UniGenei Zm.45.

    3D structure databases

    ProteinModelPortali P38562.
    SMRi P38562. Positions 3-354.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi P38562.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 542401.
    KEGGi zma:542401.

    Organism-specific databases

    Gramenei P38562.
    MaizeGDBi 17151.

    Phylogenomic databases

    KOi K01915.

    Enzyme and pathway databases

    BRENDAi 6.3.1.2. 6752.
    SABIO-RK P38562.

    Family and domain databases

    Gene3Di 3.30.590.10. 1 hit.
    InterProi IPR008147. Gln_synt_beta.
    IPR014746. Gln_synth/guanido_kin_cat_dom.
    IPR008146. Gln_synth_cat_dom.
    IPR027303. Gln_synth_gly_rich_site.
    IPR027302. Gln_synth_N_conserv_site.
    [Graphical view ]
    Pfami PF00120. Gln-synt_C. 1 hit.
    PF03951. Gln-synt_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54368. SSF54368. 1 hit.
    PROSITEi PS00180. GLNA_1. 1 hit.
    PS00181. GLNA_ATP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Differential expression of six glutamine synthetase genes in Zea mays."
      Li M.-G., Villemur R., Hussey P.J., Silflow C.D., Gantt J.S., Snustad D.P.
      Plant Mol. Biol. 23:401-407(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: cv. A188.
      Tissue: Seedling.
    2. "Molecular cloning of the family of glutamine synthetase genes from maize: expression of genes for glutamine synthetase and ferredoxin-dependent glutamate synthase in photosynthetic and non-photosynthetic tissues."
      Sakakibara H., Kawabata S., Takahashi H., Hase T., Sugiyama T.
      Plant Cell Physiol. 33:49-58(1992)
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: cv. Golden cross Bantam T51.
      Tissue: Leaf.

    Entry informationi

    Entry nameiGLNA4_MAIZE
    AccessioniPrimary (citable) accession number: P38562
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1994
    Last sequence update: October 1, 1994
    Last modified: October 1, 2014
    This is version 78 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3