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P38561

- GLNA3_MAIZE

UniProt

P38561 - GLNA3_MAIZE

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Protein

Glutamine synthetase root isozyme 3

Gene
GLN4, GS1-3
Organism
Zea mays (Maize)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

Plays a role in the flow of nitrogen into nitrogenous organic compounds.

Catalytic activityi

ATP + L-glutamate + NH3 = ADP + phosphate + L-glutamine.

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. copper ion binding Source: EnsemblPlants/Gramene
  3. glutamate-ammonia ligase activity Source: UniProtKB-EC

GO - Biological processi

  1. glutamine biosynthetic process Source: InterPro
  2. leaf senescence Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

Ligase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamine synthetase root isozyme 3 (EC:6.3.1.2)
Alternative name(s):
GS112
Glutamate--ammonia ligase
Gene namesi
Name:GLN4
Synonyms:GS1-3
OrganismiZea mays (Maize)
Taxonomic identifieri4577 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeZea

Organism-specific databases

GrameneiP38561.
MaizeGDBi17151.

Subcellular locationi

GO - Cellular componenti

  1. cell wall Source: EnsemblPlants/Gramene
  2. cytosolic ribosome Source: EnsemblPlants/Gramene
  3. plasma membrane Source: EnsemblPlants/Gramene
  4. plasmodesma Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 356356Glutamine synthetase root isozyme 3PRO_0000153180Add
BLAST

Proteomic databases

PRIDEiP38561.

Expressioni

Tissue specificityi

Found in all the tissues examined with higher expression found in tissues of the root.

Interactioni

Subunit structurei

Homooctamer.

Structurei

Secondary structure

1
356
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi4 – 85
Helixi12 – 143
Beta strandi19 – 268
Beta strandi33 – 4210
Helixi47 – 493
Beta strandi53 – 564
Turni57 – 615
Beta strandi65 – 673
Beta strandi69 – 7911
Turni81 – 833
Beta strandi88 – 958
Helixi107 – 1159
Helixi117 – 1226
Beta strandi125 – 13612
Turni137 – 1393
Beta strandi154 – 1563
Turni163 – 1653
Helixi169 – 18214
Beta strandi186 – 1916
Beta strandi197 – 20610
Helixi208 – 22821
Beta strandi230 – 2334
Beta strandi236 – 2394
Beta strandi241 – 2433
Beta strandi247 – 2537
Turni255 – 2573
Helixi262 – 27514
Helixi277 – 2815
Helixi288 – 2914
Beta strandi293 – 2975
Beta strandi306 – 3094
Beta strandi313 – 3175
Helixi319 – 3235
Beta strandi329 – 3313
Helixi340 – 35112

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2D3AX-ray2.63A/B/C/D/E/F/G/H/I/J1-356[»]
2D3BX-ray3.50A/B/C/D/E/F/G/H/I/J1-356[»]
2D3CX-ray3.81A/B/C/D/E/F/G/H/I/J1-356[»]
ProteinModelPortaliP38561.
SMRiP38561. Positions 3-355.

Miscellaneous databases

EvolutionaryTraceiP38561.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000061500.
KOiK01915.

Family and domain databases

Gene3Di3.30.590.10. 1 hit.
InterProiIPR008147. Gln_synt_beta.
IPR014746. Gln_synth/guanido_kin_cat_dom.
IPR008146. Gln_synth_cat_dom.
IPR027303. Gln_synth_gly_rich_site.
IPR027302. Gln_synth_N_conserv_site.
[Graphical view]
PfamiPF00120. Gln-synt_C. 1 hit.
PF03951. Gln-synt_N. 1 hit.
[Graphical view]
SUPFAMiSSF54368. SSF54368. 1 hit.
PROSITEiPS00180. GLNA_1. 1 hit.
PS00181. GLNA_ATP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P38561-1 [UniParc]FASTAAdd to Basket

« Hide

MACLTDLVNL NLSDTTEKII AEYIWIGGSG MDLRSKARTL SGPVTDPSKL    50
PKWNYDGSST GQAPGEDSEV ILYPQAIFKD PFRRGNNILV MCDCYTPAGE 100
PIPTNKRYNA AKIFSSPEVA AEEPWYGIEQ EYTLLQKDTN WPLGWPIGGF 150
PGPQGPYYCG IGAEKSFGRD IVDAHYKACL YAGINISGIN GEVMPGQWEF 200
QVGPSVGISS GDQVWVARYI LERITEIAGV VVTFDPKPIP GDWNGAGAHT 250
NYSTESMRKE GGYEVIKAAI EKLKLRHREH IAAYGEGNDG RLTGRHETAD 300
INTFSWGVAN RGASVRVGRE TEQNGKGYFE DRRPASNMDP YVVTSMIAET 350
TIIWKP 356
Length:356
Mass (Da):39,169
Last modified:October 1, 1994 - v1
Checksum:i0112DD32D5FB474C
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti15 – 151T → N in BAA03431. 1 Publication
Sequence conflicti289 – 2902DG → ER in BAA03431. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X65928 mRNA. Translation: CAA46721.1.
D14577 mRNA. Translation: BAA03431.1.
PIRiS39479.
RefSeqiNP_001105296.1. NM_001111826.1.
UniGeneiZm.66285.

Genome annotation databases

GeneIDi542214.
KEGGizma:542214.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X65928 mRNA. Translation: CAA46721.1 .
D14577 mRNA. Translation: BAA03431.1 .
PIRi S39479.
RefSeqi NP_001105296.1. NM_001111826.1.
UniGenei Zm.66285.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2D3A X-ray 2.63 A/B/C/D/E/F/G/H/I/J 1-356 [» ]
2D3B X-ray 3.50 A/B/C/D/E/F/G/H/I/J 1-356 [» ]
2D3C X-ray 3.81 A/B/C/D/E/F/G/H/I/J 1-356 [» ]
ProteinModelPortali P38561.
SMRi P38561. Positions 3-355.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi P38561.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 542214.
KEGGi zma:542214.

Organism-specific databases

Gramenei P38561.
MaizeGDBi 17151.

Phylogenomic databases

HOGENOMi HOG000061500.
KOi K01915.

Miscellaneous databases

EvolutionaryTracei P38561.

Family and domain databases

Gene3Di 3.30.590.10. 1 hit.
InterProi IPR008147. Gln_synt_beta.
IPR014746. Gln_synth/guanido_kin_cat_dom.
IPR008146. Gln_synth_cat_dom.
IPR027303. Gln_synth_gly_rich_site.
IPR027302. Gln_synth_N_conserv_site.
[Graphical view ]
Pfami PF00120. Gln-synt_C. 1 hit.
PF03951. Gln-synt_N. 1 hit.
[Graphical view ]
SUPFAMi SSF54368. SSF54368. 1 hit.
PROSITEi PS00180. GLNA_1. 1 hit.
PS00181. GLNA_ATP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Differential expression of six glutamine synthetase genes in Zea mays."
    Li M.-G., Villemur R., Hussey P.J., Silflow C.D., Gantt J.S., Snustad D.P.
    Plant Mol. Biol. 23:401-407(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. A188.
    Tissue: Seedling.
  2. "Molecular cloning of the family of glutamine synthetase genes from maize: expression of genes for glutamine synthetase and ferredoxin-dependent glutamate synthase in photosynthetic and non-photosynthetic tissues."
    Sakakibara H., Kawabata S., Takahashi H., Hase T., Sugiyama T.
    Plant Cell Physiol. 33:49-58(1992)
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Golden cross Bantam T51.
    Tissue: Leaf.

Entry informationi

Entry nameiGLNA3_MAIZE
AccessioniPrimary (citable) accession number: P38561
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: October 1, 1994
Last modified: July 9, 2014
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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