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P38559

- GLNA1_MAIZE

UniProt

P38559 - GLNA1_MAIZE

Protein

Glutamine synthetase root isozyme 1

Gene

GLN6

Organism
Zea mays (Maize)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 83 (01 Oct 2014)
      Sequence version 1 (01 Oct 1994)
      Previous versions | rss
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    Functioni

    Plays a role in the flow of nitrogen into nitrogenous organic compounds.

    Catalytic activityi

    ATP + L-glutamate + NH3 = ADP + phosphate + L-glutamine.

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. glutamate-ammonia ligase activity Source: UniProtKB-EC

    GO - Biological processi

    1. glutamine biosynthetic process Source: InterPro

    Keywords - Molecular functioni

    Ligase

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    SABIO-RKP38559.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamine synthetase root isozyme 1 (EC:6.3.1.2)
    Alternative name(s):
    GS122
    Glutamate--ammonia ligase
    Gene namesi
    Name:GLN6
    Synonyms:GS1-1
    OrganismiZea mays (Maize)
    Taxonomic identifieri4577 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeZea

    Organism-specific databases

    GrameneiP38559.
    MaizeGDBi17151.

    Subcellular locationi

    GO - Cellular componenti

    1. chloroplast Source: EnsemblPlants/Gramene
    2. plasmodesma Source: EnsemblPlants/Gramene

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 357357Glutamine synthetase root isozyme 1PRO_0000153178Add
    BLAST

    Proteomic databases

    PRIDEiP38559.

    Expressioni

    Tissue specificityi

    Found mainly in the cortical tissues of seedling roots, and in the root tip.

    Interactioni

    Subunit structurei

    Homooctamer.

    Structurei

    3D structure databases

    ProteinModelPortaliP38559.
    SMRiP38559. Positions 4-354.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glutamine synthetase family.Curated

    Phylogenomic databases

    HOGENOMiHOG000061500.
    KOiK01915.

    Family and domain databases

    Gene3Di3.30.590.10. 1 hit.
    InterProiIPR008147. Gln_synt_beta.
    IPR014746. Gln_synth/guanido_kin_cat_dom.
    IPR008146. Gln_synth_cat_dom.
    IPR027303. Gln_synth_gly_rich_site.
    IPR027302. Gln_synth_N_conserv_site.
    [Graphical view]
    PfamiPF00120. Gln-synt_C. 1 hit.
    PF03951. Gln-synt_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF54368. SSF54368. 1 hit.
    PROSITEiPS00180. GLNA_1. 1 hit.
    PS00181. GLNA_ATP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P38559-1 [UniParc]FASTAAdd to Basket

    « Hide

    MASLTDLVNL DLSDCTDRII AEYIWIGGTG IDLRSKARTV KGPITDPIQL    50
    PKWNYDGSST GQAPGEDSEV ILYPQAIFKD PFRKGNHILV MCDCYTPQGE 100
    PIPTNKRYSA AKVFSHPDVA AEVPWYGIEQ EYTLLQKDVS WPLGWPVGGY 150
    PGPQGPYYCA AGADKAFGRD VVDAHYKACL YAGINISGIN GEVMPGQWEF 200
    QVGPSVGISA GDEIWVARYI LERITEMAGI VLSLDPKPIK GDWNGAGAHT 250
    NYSTKSMREA GGYEVIKAAI DKLGKRHKEH IAAYGEGNER RLTGRHETAD 300
    INTFKWGVAN RGASIRVGRD TEREGKGYFE DRRPASNMDP YVVTGMIAET 350
    TILWNGN 357
    Length:357
    Mass (Da):39,250
    Last modified:October 1, 1994 - v1
    Checksum:i912A5E3BAF9CC2B8
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti48 – 481I → S in BAA03433. 1 PublicationCurated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X65926 mRNA. Translation: CAA46719.1.
    D14579 mRNA. Translation: BAA03433.1.
    PIRiS39477.
    RefSeqiNP_001105538.1. NM_001112068.1.
    UniGeneiZm.96656.

    Genome annotation databases

    GeneIDi542520.
    KEGGizma:542520.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X65926 mRNA. Translation: CAA46719.1 .
    D14579 mRNA. Translation: BAA03433.1 .
    PIRi S39477.
    RefSeqi NP_001105538.1. NM_001112068.1.
    UniGenei Zm.96656.

    3D structure databases

    ProteinModelPortali P38559.
    SMRi P38559. Positions 4-354.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi P38559.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 542520.
    KEGGi zma:542520.

    Organism-specific databases

    Gramenei P38559.
    MaizeGDBi 17151.

    Phylogenomic databases

    HOGENOMi HOG000061500.
    KOi K01915.

    Enzyme and pathway databases

    SABIO-RK P38559.

    Family and domain databases

    Gene3Di 3.30.590.10. 1 hit.
    InterProi IPR008147. Gln_synt_beta.
    IPR014746. Gln_synth/guanido_kin_cat_dom.
    IPR008146. Gln_synth_cat_dom.
    IPR027303. Gln_synth_gly_rich_site.
    IPR027302. Gln_synth_N_conserv_site.
    [Graphical view ]
    Pfami PF00120. Gln-synt_C. 1 hit.
    PF03951. Gln-synt_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54368. SSF54368. 1 hit.
    PROSITEi PS00180. GLNA_1. 1 hit.
    PS00181. GLNA_ATP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Differential expression of six glutamine synthetase genes in Zea mays."
      Li M.-G., Villemur R., Hussey P.J., Silflow C.D., Gantt J.S., Snustad D.P.
      Plant Mol. Biol. 23:401-407(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: cv. A188.
      Tissue: Seedling.
    2. "Molecular cloning of the family of glutamine synthetase genes from maize: expression of genes for glutamine synthetase and ferredoxin-dependent glutamate synthase in photosynthetic and non-photosynthetic tissues."
      Sakakibara H., Kawabata S., Takahashi H., Hase T., Sugiyama T.
      Plant Cell Physiol. 33:49-58(1992)
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: cv. Golden cross Bantam T51.
      Tissue: Leaf.
    3. Sakakibara H.
      Submitted (MAR-1995) to the EMBL/GenBank/DDBJ databases
      Cited for: SEQUENCE REVISION.

    Entry informationi

    Entry nameiGLNA1_MAIZE
    AccessioniPrimary (citable) accession number: P38559
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1994
    Last sequence update: October 1, 1994
    Last modified: October 1, 2014
    This is version 83 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3