P38514 (RL29_THEMA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L29

Gene names

Name:	rpmC
Ordered Locus Names:	TM_1492

Organism

Thermotoga maritima

Taxonomic identifier

2336 [NCBI]

Taxonomic lineage

Bacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length	66 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L29P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	3D-structure Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 66

66

50S ribosomal protein L29 HAMAP MF_00374

PRO_0000130481

Secondary structure

1

.

.

.

.

.

.

.

.

66

Helix Strand Turn

Details...

Helix

5 – 8

4

Helix

11 – 34

24

Helix

40 – 62

23

Turn

63 – 65

3

Sequences

	Sequence		Length	Mass (Da)
	P38514 [UniParc]. Last modified October 1, 1994. Version 1. Checksum: 83488556251ED647	FASTA	66	7,972
	10 20 30 40 50 60 MKASELRNYT DEELKNLLEE KKRQLMELRF QLAMGQLKNT SLIKLTKRDI ARIKTILRER ELGIRR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Phylogenetic depth of S10 and spc operons: cloning and sequencing of a ribosomal protein gene cluster from the extremely thermophilic bacterium Thermotoga maritima." Sanangelantoni A.M., Bocchetta M., Cammarano P., Tiboni O. J. Bacteriol. 176:7703-7710(1994) [PubMed: 8002596] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099.
[2]	"Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima." Nelson K.E., Clayton R.A., Gill S.R., Gwinn M.L., Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Nelson W.C., Ketchum K.A., McDonald L.A., Utterback T.R., Malek J.A., Linher K.D., Garrett M.M., Stewart A.M., Cotton M.D., Pratt M.S. , Phillips C.A., Richardson D.L., Heidelberg J.F., Sutton G.G., Fleischmann R.D., Eisen J.A., White O., Salzberg S.L., Smith H.O., Venter J.C., Fraser C.M. Nature 399:323-329(1999) [PubMed: 10360571] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

Z21677 Genomic DNA. Translation: CAA79785.1.
AE000512 Genomic DNA. Translation: AAD36558.1.

PIR

S40196.

RefSeq

NP_229292.1. NC_000853.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1R73	NMR	-	A	1-66	[»]

ProteinModelPortal

P38514.

SMR

P38514. Positions 1-66.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

898000.

GenomeReviews

Gene locus TM_1492 in contig AE000512_GR.

KEGG

tma:TM1492.

NMPDR

fig|243274.1.peg.1476.

PATRIC

23937942. VBITheMar51294_1509.

TIGR

TM_1492.

Phylogenomic databases

HOGENOM

HBG730819.

OMA

QLANNRR.

PhylomeDB

P38514.

ProtClustDB

PRK00306.

Enzyme and pathway databases

BioCyc

TMAR243274:TM_1492-MONOMER.

Family and domain databases

HAMAP

MF_00374. Ribosomal_L29.
[Tree]

InterPro

IPR001854. Ribosomal_L29.
IPR018254. Ribosomal_L29_CS.
[Graphical view]

Gene3D

G3DSA:1.10.287.310. Ribosomal_L29. 1 hit.

KO

K02904.

Pfam

PF00831. Ribosomal_L29. 1 hit.
[Graphical view]

SUPFAM

SSF46561. Ribosomal_L29. 1 hit.

TIGRFAMs

TIGR00012. L29. 1 hit.

PROSITE

PS00579. RIBOSOMAL_L29. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

RL29_THEMA

Accession

Primary (citable) accession number: P38514

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 1, 1994
Last sequence update:	October 1, 1994
Last modified:	January 25, 2012
This is version 73 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program