50S ribosomal protein L29 - Thermotoga maritima

Contribute

Read comments (0) or add your own

Reviewed, UniProtKB/Swiss-Prot P38514 (RL29_THEMA)

Last modified February 9, 2010. Version 63. History...

Clusters with 100%, 90%, 50% identity |

Documents (3) |

Third-party data |

Customize display

text xml rdf/xml gff fasta

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein names

Recommended name:
50S ribosomal protein L29

Gene names

Name:	rpmC
Ordered Locus Names:	TM_1492

Organism

Thermotoga maritima [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length	66 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level.

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L29P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	3D-structure Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

66

50S ribosomal protein L29 HAMAP MF_00374

PRO_0000130481

Secondary structure

1

.

.

.

.

.

.

.

.

66

Helix Strand Turn

Sequences

Sequence

Length

Mass (Da)

Tools

P38514-1 [UniParc].

Last modified October 1, 1994. Version 1.
Checksum: 83488556251ED647
Show »

66

7,972

        10         20         30         40         50         60 
MKASELRNYT DEELKNLLEE KKRQLMELRF QLAMGQLKNT SLIKLTKRDI ARIKTILRER 


ELGIRR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Phylogenetic depth of S10 and spc operons: cloning and sequencing of a ribosomal protein gene cluster from the extremely thermophilic bacterium Thermotoga maritima." Sanangelantoni A.M., Bocchetta M., Cammarano P., Tiboni O. J. Bacteriol. 176:7703-7710(1994) [PubMed: 8002596] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099.
[2]	"Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima." Nelson K.E., Clayton R.A., Gill S.R., Gwinn M.L., Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Nelson W.C., Ketchum K.A., McDonald L.A., Utterback T.R., Malek J.A., Linher K.D., Garrett M.M., Stewart A.M., Cotton M.D., Pratt M.S. Fraser C.M. Nature 399:323-329(1999) [PubMed: 10360571] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

Z21677 Genomic DNA. Translation: CAA79785.1.
AE000512 Genomic DNA. Translation: AAD36558.1.

PIR

RefSeq

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1R73	NMR	-	A	1-66	[»]

ModBase

Genome annotation databases

GeneID

GenomeReviews

Gene locus TM_1492 in contig AE000512_GR.

KEGG

NMPDR

fig|243274.1.peg.1476.

TIGR

Phylogenomic databases

HOGENOM

OMA

Enzyme and pathway databases

BioCyc

TMAR243274:TM_1492-MONOMER.

Family and domain databases

HAMAP

MF_00374_B. Ribosomal_L29_B.
[Tree]

InterPro

IPR001854. Ribosomal_L29.
IPR018254. Ribosomal_L29_CS.
[Graphical view]

Gene3D

G3DSA:1.10.287.310. Ribosomal_L29. 1 hit.

Pfam

PF00831. Ribosomal_L29. 1 hit.
[Graphical view]

TIGRFAMs

TIGR00012. L29. 1 hit.

PROSITE

PS00579. RIBOSOMAL_L29. 1 hit.
[Graphical view]

ProtoNet

Entry information

Entry name

RL29_THEMA

Accession

Primary (citable) accession number: P38514

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 1, 1994
Last sequence update:	October 1, 1994
Last modified:	February 9, 2010
This is version 63 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

Ribosomal proteins

Ribosomal proteins families and list of entries

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents