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P38343

- SLM6_YEAST

UniProt

P38343 - SLM6_YEAST

Protein

Protein SLM6

Gene

SLM6

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 68 (01 Oct 2014)
      Sequence version 2 (15 Dec 1998)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. endocytosis Source: SGD

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein SLM6
    Alternative name(s):
    Synthetic lethal with MSS4 protein 6
    Gene namesi
    Name:SLM6
    Ordered Locus Names:YBR266C
    ORF Names:YBR1735
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome II

    Organism-specific databases

    SGDiS000000470. SLM6.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 150150Protein SLM6PRO_0000202528Add
    BLAST

    Expressioni

    Gene expression databases

    GenevestigatoriP38343.

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-4955N.
    IntActiP38343. 1 interaction.
    MINTiMINT-510204.
    STRINGi4932.YBR266C.

    Structurei

    3D structure databases

    ProteinModelPortaliP38343.
    ModBaseiSearch...
    MobiDBiSearch...

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini1 – 7676ExtracellularSequence AnalysisAdd
    BLAST
    Topological domaini98 – 1047CytoplasmicSequence Analysis
    Topological domaini126 – 15025ExtracellularSequence AnalysisAdd
    BLAST

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei77 – 9721HelicalSequence AnalysisAdd
    BLAST
    Transmembranei105 – 12521HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    OrthoDBiEOG7KM689.

    Sequencei

    Sequence statusi: Complete.

    P38343-1 [UniParc]FASTAAdd to Basket

    « Hide

    MCSRFSSTSL KCLLCSQNRH CSSGISTLLR TFSCITLSAI SSSVNCSGSS    50
    FLGSSFSLFS SFSCKESLLR SGVFPSWLFC MFSSILALAI SNSFFFFSSN 100
    ACFSLLFNSF LVTGFSFSAD LLVLAAAADT LESNVSNDIG GNCATRLFKL 150
    Length:150
    Mass (Da):16,042
    Last modified:December 15, 1998 - v2
    Checksum:iA3D72D0816B47CA3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X70529 Genomic DNA. Translation: CAA49932.1.
    Z36135 Genomic DNA. Translation: CAA85230.1.
    BK006936 Genomic DNA. No translation available.
    PIRiS32968.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X70529 Genomic DNA. Translation: CAA49932.1 .
    Z36135 Genomic DNA. Translation: CAA85230.1 .
    BK006936 Genomic DNA. No translation available.
    PIRi S32968.

    3D structure databases

    ProteinModelPortali P38343.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-4955N.
    IntActi P38343. 1 interaction.
    MINTi MINT-510204.
    STRINGi 4932.YBR266C.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    SGDi S000000470. SLM6.

    Phylogenomic databases

    OrthoDBi EOG7KM689.

    Gene expression databases

    Genevestigatori P38343.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "The complete sequence of a 19,482 bp segment located on the right arm of chromosome II from Saccharomyces cerevisiae."
      Doignon F., Biteau N., Crouzet M., Aigle M.
      Yeast 9:189-199(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    2. "Complete DNA sequence of yeast chromosome II."
      Feldmann H., Aigle M., Aljinovic G., Andre B., Baclet M.C., Barthe C., Baur A., Becam A.-M., Biteau N., Boles E., Brandt T., Brendel M., Brueckner M., Bussereau F., Christiansen C., Contreras R., Crouzet M., Cziepluch C.
      , Demolis N., Delaveau T., Doignon F., Domdey H., Duesterhus S., Dubois E., Dujon B., El Bakkoury M., Entian K.-D., Feuermann M., Fiers W., Fobo G.M., Fritz C., Gassenhuber J., Glansdorff N., Goffeau A., Grivell L.A., de Haan M., Hein C., Herbert C.J., Hollenberg C.P., Holmstroem K., Jacq C., Jacquet M., Jauniaux J.-C., Jonniaux J.-L., Kallesoee T., Kiesau P., Kirchrath L., Koetter P., Korol S., Liebl S., Logghe M., Lohan A.J.E., Louis E.J., Li Z.Y., Maat M.J., Mallet L., Mannhaupt G., Messenguy F., Miosga T., Molemans F., Mueller S., Nasr F., Obermaier B., Perea J., Pierard A., Piravandi E., Pohl F.M., Pohl T.M., Potier S., Proft M., Purnelle B., Ramezani Rad M., Rieger M., Rose M., Schaaff-Gerstenschlaeger I., Scherens B., Schwarzlose C., Skala J., Slonimski P.P., Smits P.H.M., Souciet J.-L., Steensma H.Y., Stucka R., Urrestarazu L.A., van der Aart Q.J.M., Van Dyck L., Vassarotti A., Vetter I., Vierendeels F., Vissers S., Wagner G., de Wergifosse P., Wolfe K.H., Zagulski M., Zimmermann F.K., Mewes H.-W., Kleine K.
      EMBO J. 13:5795-5809(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    3. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    4. Aigle M., Baclet M.C., Barthe C., Biteau N., Crouzet M., Doignon F.
      Submitted (MAR-1997) to the EMBL/GenBank/DDBJ databases
      Cited for: SEQUENCE REVISION TO C-TERMINUS.
    5. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
    6. "A global topology map of the Saccharomyces cerevisiae membrane proteome."
      Kim H., Melen K., Oesterberg M., von Heijne G.
      Proc. Natl. Acad. Sci. U.S.A. 103:11142-11147(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
      Strain: ATCC 208353 / W303-1A.

    Entry informationi

    Entry nameiSLM6_YEAST
    AccessioniPrimary (citable) accession number: P38343
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1994
    Last sequence update: December 15, 1998
    Last modified: October 1, 2014
    This is version 68 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Present with 339 molecules/cell in log phase SD medium.1 Publication

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    2. Yeast chromosome II
      Yeast (Saccharomyces cerevisiae) chromosome II: entries and gene names

    External Data

    Dasty 3