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P38276

- YBY7_YEAST

UniProt

P38276 - YBY7_YEAST

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Protein
UPF0303 protein YBR137W
Gene
YBR137W, YBR1013
Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciYEAST:G3O-29091-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0303 protein YBR137W
Gene namesi
Ordered Locus Names:YBR137W
ORF Names:YBR1013
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome II

Organism-specific databases

SGDiS000000341. YBR137W.

Subcellular locationi

Cytoplasm 1 Publication

GO - Cellular componenti

  1. TRC complex Source: SGD
  2. cytoplasm Source: SGD
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 179179UPF0303 protein YBR137W
PRO_0000208926Add
BLAST

Proteomic databases

MaxQBiP38276.
PaxDbiP38276.
PeptideAtlasiP38276.

Expressioni

Gene expression databases

GenevestigatoriP38276.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
itself1EBI-21630,EBI-21630
NUP116Q026301EBI-21630,EBI-11703
SRP1Q028211EBI-21630,EBI-1797
TEM1P389871EBI-21630,EBI-19113

Protein-protein interaction databases

BioGridi32837. 14 interactions.
DIPiDIP-2038N.
IntActiP38276. 7 interactions.
MINTiMINT-559422.
STRINGi4932.YBR137W.

Structurei

3D structure databases

ProteinModelPortaliP38276.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0303 family.

Phylogenomic databases

eggNOGiCOG4702.
HOGENOMiHOG000244036.
OMAiFTTEDAF.
OrthoDBiEOG7C8GV2.

Family and domain databases

InterProiIPR005624. DUF336.
IPR010371. UPF0303.
[Graphical view]
PfamiPF03928. DUF336. 1 hit.
[Graphical view]
PIRSFiPIRSF008757. UCP008757. 1 hit.

Sequencei

Sequence statusi: Complete.

P38276-1 [UniParc]FASTAAdd to Basket

« Hide

MVVLDKKLLE RLTSRKVPLE ELEDMEKRCF LSTFTYQDAF DLGTYIRNAV    50
KENFPEKPVA IDISLPNGHC LFRTVTYGGS ALDNDFWIQR KKKTALRFGH 100
SSFYMGCKKG DKTPEEKFFV DSKEYAFHGG AVLIQSERSD YPYACLTISG 150
LKQEEDHLMA VSSLIAFANE SLEEDLNLD 179
Length:179
Mass (Da):20,454
Last modified:July 27, 2011 - v4
Checksum:i8CBA454492E29273
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti110 – 1101G → S in CAA53495. 1 Publication
Sequence conflicti110 – 1101G → S in CAA85095. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D11088 Genomic DNA. Translation: BAA01861.1.
X75891 Genomic DNA. Translation: CAA53495.1.
Z36006 Genomic DNA. Translation: CAA85095.1.
AY558187 Genomic DNA. Translation: AAS56513.1.
BK006936 Genomic DNA. Translation: DAA07253.2.
PIRiS46006.
RefSeqiNP_009695.2. NM_001178485.2.

Genome annotation databases

EnsemblFungiiYBR137W; YBR137W; YBR137W.
GeneIDi852434.
KEGGisce:YBR137W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D11088 Genomic DNA. Translation: BAA01861.1 .
X75891 Genomic DNA. Translation: CAA53495.1 .
Z36006 Genomic DNA. Translation: CAA85095.1 .
AY558187 Genomic DNA. Translation: AAS56513.1 .
BK006936 Genomic DNA. Translation: DAA07253.2 .
PIRi S46006.
RefSeqi NP_009695.2. NM_001178485.2.

3D structure databases

ProteinModelPortali P38276.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 32837. 14 interactions.
DIPi DIP-2038N.
IntActi P38276. 7 interactions.
MINTi MINT-559422.
STRINGi 4932.YBR137W.

Proteomic databases

MaxQBi P38276.
PaxDbi P38276.
PeptideAtlasi P38276.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii YBR137W ; YBR137W ; YBR137W .
GeneIDi 852434.
KEGGi sce:YBR137W.

Organism-specific databases

SGDi S000000341. YBR137W.

Phylogenomic databases

eggNOGi COG4702.
HOGENOMi HOG000244036.
OMAi FTTEDAF.
OrthoDBi EOG7C8GV2.

Enzyme and pathway databases

BioCyci YEAST:G3O-29091-MONOMER.

Miscellaneous databases

NextBioi 971321.

Gene expression databases

Genevestigatori P38276.

Family and domain databases

InterProi IPR005624. DUF336.
IPR010371. UPF0303.
[Graphical view ]
Pfami PF03928. DUF336. 1 hit.
[Graphical view ]
PIRSFi PIRSF008757. UCP008757. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "An essential gene, ESR1, is required for mitotic cell growth, DNA repair and meiotic recombination in Saccharomyces cerevisiae."
    Kato R., Ogawa H.
    Nucleic Acids Res. 22:3104-3112(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "The sequence of 29.7 kb from the right arm of chromosome II reveals 13 complete open reading frames, of which ten correspond to new genes."
    Becam A.-M., Cullin C., Grzybowska E., Lacroute F., Nasr F., Ozier-Kalogeropoulos O., Palucha A., Slonimski P.P., Zagulski M., Herbert C.J.
    Yeast 10:S1-S11(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  3. "Complete DNA sequence of yeast chromosome II."
    Feldmann H., Aigle M., Aljinovic G., Andre B., Baclet M.C., Barthe C., Baur A., Becam A.-M., Biteau N., Boles E., Brandt T., Brendel M., Brueckner M., Bussereau F., Christiansen C., Contreras R., Crouzet M., Cziepluch C.
    , Demolis N., Delaveau T., Doignon F., Domdey H., Duesterhus S., Dubois E., Dujon B., El Bakkoury M., Entian K.-D., Feuermann M., Fiers W., Fobo G.M., Fritz C., Gassenhuber J., Glansdorff N., Goffeau A., Grivell L.A., de Haan M., Hein C., Herbert C.J., Hollenberg C.P., Holmstroem K., Jacq C., Jacquet M., Jauniaux J.-C., Jonniaux J.-L., Kallesoee T., Kiesau P., Kirchrath L., Koetter P., Korol S., Liebl S., Logghe M., Lohan A.J.E., Louis E.J., Li Z.Y., Maat M.J., Mallet L., Mannhaupt G., Messenguy F., Miosga T., Molemans F., Mueller S., Nasr F., Obermaier B., Perea J., Pierard A., Piravandi E., Pohl F.M., Pohl T.M., Potier S., Proft M., Purnelle B., Ramezani Rad M., Rieger M., Rose M., Schaaff-Gerstenschlaeger I., Scherens B., Schwarzlose C., Skala J., Slonimski P.P., Smits P.H.M., Souciet J.-L., Steensma H.Y., Stucka R., Urrestarazu L.A., van der Aart Q.J.M., Van Dyck L., Vassarotti A., Vetter I., Vierendeels F., Vissers S., Wagner G., de Wergifosse P., Wolfe K.H., Zagulski M., Zimmermann F.K., Mewes H.-W., Kleine K.
    EMBO J. 13:5795-5809(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  4. Cited for: GENOME REANNOTATION, SEQUENCE REVISION TO 110.
    Strain: ATCC 204508 / S288c.
  5. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  6. Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
  7. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
  8. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYBY7_YEAST
AccessioniPrimary (citable) accession number: P38276
Secondary accession number(s): D6VQD3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: July 27, 2011
Last modified: May 14, 2014
This is version 101 of the entry and version 4 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 1200 molecules/cell in log phase SD medium.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries
  3. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  4. Yeast chromosome II
    Yeast (Saccharomyces cerevisiae) chromosome II: entries and gene names

External Data

Dasty 3

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