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Protein

UPF0303 protein YBR137W

Gene

YBR137W

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • posttranslational protein targeting to membrane Source: SGD
Complete GO annotation...

Enzyme and pathway databases

BioCyciYEAST:G3O-29091-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0303 protein YBR137W
Gene namesi
Ordered Locus Names:YBR137W
ORF Names:YBR1013
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:YBR137W.
SGDiS000000341. YBR137W.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: SGD
  • TRC complex Source: SGD
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002089261 – 179UPF0303 protein YBR137WAdd BLAST179

Proteomic databases

MaxQBiP38276.
PRIDEiP38276.

Interactioni

Protein-protein interaction databases

BioGridi32837. 15 interactors.
DIPiDIP-2038N.
IntActiP38276. 7 interactors.
MINTiMINT-559422.

Structurei

Secondary structure

1179
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi6 – 14Combined sources9
Helixi19 – 27Combined sources9
Beta strandi30 – 32Combined sources3
Helixi36 – 53Combined sources18
Beta strandi54 – 57Combined sources4
Beta strandi60 – 64Combined sources5
Beta strandi70 – 75Combined sources6
Helixi82 – 98Combined sources17
Helixi102 – 109Combined sources8
Turni114 – 116Combined sources3
Turni122 – 124Combined sources3
Beta strandi131 – 136Combined sources6
Turni137 – 139Combined sources3
Beta strandi143 – 151Combined sources9
Helixi154 – 168Combined sources15
Turni169 – 172Combined sources4

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4CLCX-ray2.80A/B/C/D/E1-179[»]
ProteinModelPortaliP38276.
SMRiP38276.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0303 family.Curated

Phylogenomic databases

HOGENOMiHOG000244036.
InParanoidiP38276.
OMAiYACLTIS.
OrthoDBiEOG092C4T1Q.

Family and domain databases

InterProiIPR005624. Haem_degrading.
IPR010371. UPF0303.
[Graphical view]
PfamiPF03928. Haem_degrading. 1 hit.
[Graphical view]
PIRSFiPIRSF008757. UCP008757. 1 hit.

Sequencei

Sequence statusi: Complete.

P38276-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVVLDKKLLE RLTSRKVPLE ELEDMEKRCF LSTFTYQDAF DLGTYIRNAV
60 70 80 90 100
KENFPEKPVA IDISLPNGHC LFRTVTYGGS ALDNDFWIQR KKKTALRFGH
110 120 130 140 150
SSFYMGCKKG DKTPEEKFFV DSKEYAFHGG AVLIQSERSD YPYACLTISG
160 170
LKQEEDHLMA VSSLIAFANE SLEEDLNLD
Length:179
Mass (Da):20,454
Last modified:July 27, 2011 - v4
Checksum:i8CBA454492E29273
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti110G → S in CAA53495 (PubMed:8091856).Curated1
Sequence conflicti110G → S in CAA85095 (PubMed:7813418).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D11088 Genomic DNA. Translation: BAA01861.1.
X75891 Genomic DNA. Translation: CAA53495.1.
Z36006 Genomic DNA. Translation: CAA85095.1.
AY558187 Genomic DNA. Translation: AAS56513.1.
BK006936 Genomic DNA. Translation: DAA07253.2.
PIRiS46006.
RefSeqiNP_009695.2. NM_001178485.2.

Genome annotation databases

EnsemblFungiiYBR137W; YBR137W; YBR137W.
GeneIDi852434.
KEGGisce:YBR137W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D11088 Genomic DNA. Translation: BAA01861.1.
X75891 Genomic DNA. Translation: CAA53495.1.
Z36006 Genomic DNA. Translation: CAA85095.1.
AY558187 Genomic DNA. Translation: AAS56513.1.
BK006936 Genomic DNA. Translation: DAA07253.2.
PIRiS46006.
RefSeqiNP_009695.2. NM_001178485.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4CLCX-ray2.80A/B/C/D/E1-179[»]
ProteinModelPortaliP38276.
SMRiP38276.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi32837. 15 interactors.
DIPiDIP-2038N.
IntActiP38276. 7 interactors.
MINTiMINT-559422.

Proteomic databases

MaxQBiP38276.
PRIDEiP38276.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYBR137W; YBR137W; YBR137W.
GeneIDi852434.
KEGGisce:YBR137W.

Organism-specific databases

EuPathDBiFungiDB:YBR137W.
SGDiS000000341. YBR137W.

Phylogenomic databases

HOGENOMiHOG000244036.
InParanoidiP38276.
OMAiYACLTIS.
OrthoDBiEOG092C4T1Q.

Enzyme and pathway databases

BioCyciYEAST:G3O-29091-MONOMER.

Miscellaneous databases

PROiP38276.

Family and domain databases

InterProiIPR005624. Haem_degrading.
IPR010371. UPF0303.
[Graphical view]
PfamiPF03928. Haem_degrading. 1 hit.
[Graphical view]
PIRSFiPIRSF008757. UCP008757. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYBY7_YEAST
AccessioniPrimary (citable) accession number: P38276
Secondary accession number(s): D6VQD3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: July 27, 2011
Last modified: November 2, 2016
This is version 119 of the entry and version 4 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 1200 molecules/cell in log phase SD medium.1 Publication

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries
  4. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  5. Yeast chromosome II
    Yeast (Saccharomyces cerevisiae) chromosome II: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.