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Protein

Putative regulator of rDNA transcription protein 1

Gene

RRT1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

Identified in a screen for mutants with decreased levels of rDNA transcription.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative regulator of rDNA transcription protein 1
Gene namesi
Name:RRT1
Ordered Locus Names:YBL048W
ORF Names:YBL0519
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome II

Organism-specific databases

SGDiS000000144. RRT1.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei9 – 33HelicalSequence analysisAdd BLAST25
Transmembranei40 – 57HelicalSequence analysisAdd BLAST18

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002024561 – 103Putative regulator of rDNA transcription protein 1Add BLAST103

Expressioni

Inductioni

By the zinc-responsive transcription factor ZAP1 in response to zinc deficiency and by mild heat stress.2 Publications

Interactioni

Protein-protein interaction databases

IntActiP38192. 1 interactor.
MINTiMINT-2493123.

Structurei

3D structure databases

ProteinModelPortaliP38192.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Sequencei

Sequence statusi: Complete.

P38192-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MILFKNLVFL PSILIGYISI RVSLLVWVNW VLVWSSCFQV AFIFSLWYFI
60 70 80 90 100
LSIYTFFYSK KIKQIISYEP SYFVFSYRAI DLCPERVLLY FFCIFNNVVF

PML
Length:103
Mass (Da):12,447
Last modified:October 1, 1994 - v1
Checksum:i43264FBB6BE4A0C3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z23261 Genomic DNA. No translation available.
Z35809 Genomic DNA. Translation: CAA84868.1.
AY693312 Genomic DNA. Translation: AAT93331.1.
BK006936 Genomic DNA. No translation available.
PIRiS45783.

Genome annotation databases

EnsemblFungiiYBL048W; YBL048W; YBL048W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z23261 Genomic DNA. No translation available.
Z35809 Genomic DNA. Translation: CAA84868.1.
AY693312 Genomic DNA. Translation: AAT93331.1.
BK006936 Genomic DNA. No translation available.
PIRiS45783.

3D structure databases

ProteinModelPortaliP38192.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP38192. 1 interactor.
MINTiMINT-2493123.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYBL048W; YBL048W; YBL048W.

Organism-specific databases

SGDiS000000144. RRT1.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiRRT1_YEAST
AccessioniPrimary (citable) accession number: P38192
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: October 1, 1994
Last modified: May 11, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Caution

Product of a dubious gene prediction.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome II
    Yeast (Saccharomyces cerevisiae) chromosome II: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.