Reviewed,
UniProtKB/Swiss-Prot P38125 (YB30_YEAST)
Last modified
November 24, 2009.
Version 70.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Uncharacterized transporter YBR180W | ||||
| Gene names |
| ||||
| Organism | Saccharomyces cerevisiae (Baker's yeast) [Complete proteome] | ||||
| Taxonomic identifier | 4932 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces |
Protein attributes
| Sequence length | 572 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Subcellular location | |
| Sequence similarities | Belongs to the major facilitator superfamily. CAR1 family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Transport |
| Cellular component | Membrane |
| Domain | Transmembrane |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | amine transport Inferred from mutant phenotype. Source: SGD ascospore wall assemblyInferred from mutant phenotype. Source: SGD transmembrane transportInferred from mutant phenotype. Source: SGD |
| Cellular component | integral to membrane Inferred from electronic annotation. Source: UniProtKB-SubCell prospore membraneInferred from direct assay. Source: SGD |
| Molecular function | amine transmembrane transporter activity Inferred from mutant phenotype. Source: SGD protein bindingInferred from physical interaction. Source: IntAct |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 572 | 572 | Uncharacterized transporter YBR180W | PRO_0000173438 | |||||
Regions | |||||||||
| Topological domain | 1 – 110 | 110 | Cytoplasmic Potential | ||||||
| Transmembrane | 111 – 131 | 21 | Potential | ||||||
| Topological domain | 132 – 149 | 18 | Extracellular Potential | ||||||
| Transmembrane | 150 – 170 | 21 | Potential | ||||||
| Topological domain | 171 – 184 | 14 | Cytoplasmic Potential | ||||||
| Transmembrane | 185 – 205 | 21 | Potential | ||||||
| Topological domain | 206 – 207 | 2 | Extracellular Potential | ||||||
| Transmembrane | 208 – 228 | 21 | Potential | ||||||
| Topological domain | 229 – 240 | 12 | Cytoplasmic Potential | ||||||
| Transmembrane | 241 – 261 | 21 | Potential | ||||||
| Topological domain | 262 – 267 | 6 | Extracellular Potential | ||||||
| Transmembrane | 268 – 288 | 21 | Potential | ||||||
| Topological domain | 289 – 366 | 78 | Cytoplasmic Potential | ||||||
| Transmembrane | 367 – 387 | 21 | Potential | ||||||
| Topological domain | 388 – 398 | 11 | Extracellular Potential | ||||||
| Transmembrane | 399 – 419 | 21 | Potential | ||||||
| Topological domain | 420 – 446 | 27 | Cytoplasmic Potential | ||||||
| Transmembrane | 447 – 469 | 23 | Potential | ||||||
| Topological domain | 470 – 472 | 3 | Extracellular Potential | ||||||
| Transmembrane | 473 – 493 | 21 | Potential | ||||||
| Topological domain | 494 – 520 | 27 | Cytoplasmic Potential | ||||||
| Transmembrane | 521 – 541 | 21 | Potential | ||||||
| Topological domain | 542 | 1 | Extracellular Potential | ||||||
| Transmembrane | 543 – 563 | 21 | Potential | ||||||
| Topological domain | 564 – 572 | 9 | Cytoplasmic Potential | ||||||
Sequences
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References
| [1] | "Complete DNA sequence of yeast chromosome II." Feldmann H., Aigle M., Aljinovic G., Andre B., Baclet M.C., Barthe C., Baur A., Becam A.-M., Biteau N., Boles E., Brandt T., Brendel M., Brueckner M., Bussereau F., Christiansen C., Contreras R., Crouzet M., Cziepluch C. Kleine K.EMBO J. 13:5795-5809(1994) [PubMed: 7813418] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204508 / S288c. |
| [2] | "A global topology map of the Saccharomyces cerevisiae membrane proteome." Kim H., Melen K., Oesterberg M., von Heijne G. Proc. Natl. Acad. Sci. U.S.A. 103:11142-11147(2006) [PubMed: 16847258] [Abstract] Cited for: TOPOLOGY [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| Z36049 Genomic DNA. Translation: CAA85141.1. | |
| PIR | S46051. |
| RefSeq | NP_009739.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP:5179N. |
| IntAct | P38125. 4 interactions. |
| STRING | P38125. |
Genome annotation databases | |
| Ensembl | YBR180W; YBR180W; YBR180W; Saccharomyces cerevisiae. [Genome view] |
| GeneID | 852478. |
| KEGG | sce:YBR180W. |
| NMPDR | fig|4932.3.peg.445. |
Organism-specific databases | |
| CYGD | YBR180w. |
| SGD | S000000384. DTR1. |
Phylogenomic databases | |
| HOGENOM | P38125. |
| OMA | WASWADY |
| OrthoDB | EOG9W9KM2 |
Gene expression databases | |
| ArrayExpress | P38125. |
| Genevestigator | P38125. |
| GermOnline | YBR180W. Saccharomyces cerevisiae. |
Family and domain databases | |
| InterPro | IPR011701. MFS_1. IPR016196. MFS_general_subst_transpt. [Graphical view] |
| Pfam | PF07690. MFS_1. 1 hit. [Graphical view] |
| PROSITE | PS50850. MFS. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 971444. |
Entry information
| Entry name | YB30_YEAST | ||||||||
| Accession | Primary (citable) accession number: P38125 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | FPAP (Fungal Proteome Annotation Project) | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |
| Yeast Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD |
| Yeast chromosome II Yeast (Saccharomyces cerevisiae) chromosome II: entries and gene names |

Clusters with


