Reviewed, UniProtKB/Swiss-Prot P38081 (YBQ6_YEAST)

Names and origin

Protein names

Recommended name:
    Uncharacterized glycosyl hydrolase YBR056W
    EC=3.2.1.-

Gene names

Ordered Locus Names:	YBR056W
ORF Names:	YBR0510

Organism

Saccharomyces cerevisiae (Baker's yeast) [Complete proteome]

Taxonomic identifier

4932 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces

Protein attributes

Sequence length	501 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Miscellaneous	Present with 1960 molecules/cell in log phase SD medium.
Sequence similarities	Belongs to the glycosyl hydrolase 5 (cellulase A) family.

Ontologies

Keywords
Molecular function	Glycosidase Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from direct assay. Source: SGD
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, acting on glycosyl bonds Inferred from electronic annotation. Source: UniProtKB-KW identical protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
itself		1	EBI-21453,EBI-21453
	P43582	1	EBI-21453,EBI-22766
	P43591	1	EBI-21453,EBI-22928
AUS1	Q08409	1	EBI-21453,EBI-35723
ESS1	P22696	1	EBI-21453,EBI-6679
PRP40	P33203	1	EBI-21453,EBI-701
RSP5	P39940	1	EBI-21453,EBI-16219
SET2	P46995	1	EBI-21453,EBI-16985
SSM4	P40318	1	EBI-21453,EBI-18208
URN1	Q06525	1	EBI-21453,EBI-35138
VID30	P53076	1	EBI-21453,EBI-24173

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 501	501	Uncharacterized glycosyl hydrolase YBR056W		PRO_0000184055
Sites
	Active site	236	1	Proton donor By similarity
	Active site	333	1	Nucleophile By similarity

Sequences

	Sequence		Length	Mass (Da)
	P38081-1 [UniParc]. Last modified October 1, 1994. Version 1. Checksum: 5133A161736ADDD3	FASTA	501	57,822
	10 20 30 40 50 60 MIGSLRNKFE HFKVSEKGGQ NLSTTLPKLP PAKDLDRSTI YKYRYNYGVN LGALFVLEPW 70 80 90 100 110 120 IFSKETICTI DGKEYDSEFD AISQQLKKHS SEDVAKMLSD HYKKYIDRID WEWLSKDAHI 130 140 150 160 170 180 TALRIPIGYW HVEDGKHLDS LPFAPLRKVY ELAKPWEKLG ELINNAKKMS IGVLIDLHGL 190 200 210 220 230 240 PGGANCDSHS GSKSGEAAFF HKEKYMTKVY KDILPAIINT MTLGNENIIG IQVVNEACFD 250 260 270 280 290 300 NNPKGQKFYY SEAINTVEKL QPGLPVIISD GWWPQQWADW VKEKHFSEIV VIDSHVYRCF 310 320 330 340 350 360 SDSDKSKDAN SIIKDLPNTV NFPHEDADYT VGEFSGVLDG QTWNKTSGDR DAIVQKYVQT 370 380 390 400 410 420 QADVFSHVAS WGWFFWTLQF EYGDGGEWGL APMMQKGNLP KRPHGDDLQV DKKKIDSIIH 430 440 450 460 470 480 EHEAYWNGKG KNFEHWRFED GIKTAVDDII AFRKFDNSLI GRWHSWKSQR RAEYVSAKKD 490 500 SEFMWEWDQG YQRGLDEFNK Y

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of 24 kb on chromosome II of Saccharomyces cerevisiae." Aljinovic G., Pohl T.M. Yeast 11:475-479(1995) [PubMed: 7597852] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: ATCC 204508 / S288c.
[2]	"Complete DNA sequence of yeast chromosome II." Feldmann H., Aigle M., Aljinovic G., Andre B., Baclet M.C., Barthe C., Baur A., Becam A.-M., Biteau N., Boles E., Brandt T., Brendel M., Brueckner M., Bussereau F., Christiansen C., Contreras R., Crouzet M., Cziepluch C. , Demolis N., Delaveau T., Doignon F., Domdey H., Duesterhus S., Dubois E., Dujon B., El Bakkoury M., Entian K.-D., Feuermann M., Fiers W., Fobo G.M., Fritz C., Gassenhuber J., Glansdorff N., Goffeau A., Grivell L.A., de Haan M., Hein C., Herbert C.J., Hollenberg C.P., Holmstroem K., Jacq C., Jacquet M., Jauniaux J.-C., Jonniaux J.-L., Kallesoee T., Kiesau P., Kirchrath L., Koetter P., Korol S., Liebl S., Logghe M., Lohan A.J.E., Louis E.J., Li Z.Y., Maat M.J., Mallet L., Mannhaupt G., Messenguy F., Miosga T., Molemans F., Mueller S., Nasr F., Obermaier B., Perea J., Pierard A., Piravandi E., Pohl F.M., Pohl T.M., Potier S., Proft M., Purnelle B., Ramezani Rad M., Rieger M., Rose M., Schaaff-Gerstenschlaeger I., Scherens B., Schwarzlose C., Skala J., Slonimski P.P., Smits P.H.M., Souciet J.-L., Steensma H.Y., Stucka R., Urrestarazu L.A., van der Aart Q.J.M., Van Dyck L., Vassarotti A., Vetter I., Vierendeels F., Vissers S., Wagner G., de Wergifosse P., Wolfe K.H., Zagulski M., Zimmermann F.K., Mewes H.-W., Kleine K. EMBO J. 13:5795-5809(1994) [PubMed: 7813418] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204508 / S288c.
[3]	"Global analysis of protein expression in yeast." Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S. Nature 425:737-741(2003) [PubMed: 14562106] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	Z35925 Genomic DNA. Translation: CAA84999.1. Z46260 Genomic DNA. Translation: CAA86399.1.
PIR	S45914.
RefSeq	NP_009612.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
DIP	DIP:5444N.
IntAct	P38081.
Proteomic databases
PeptideAtlas	P38081.
Genome annotation databases
Ensembl	YBR056W. Saccharomyces cerevisiae. [Contig view]
GeneID	852346.
GenomeReviews	Gene locus YBR056W in contig Y13134_GR.
KEGG	sce:YBR056W.
NMPDR	fig|4932.3.peg.307.
Organism-specific databases
CYGD	YBR056w.
SGD	S000000260. YBR056W.
Yeast-GFP	Search...
Phylogenomic databases
HOGENOM	P38081.
Gene expression databases
ArrayExpress	P38081.
GermOnline	YBR056W. Saccharomyces cerevisiae.
Family and domain databases
InterPro	IPR001547. Glyco_hydro_5. IPR013781. Glyco_hydro_sub_cat. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PROSITE	PS00659. GLYCOSYL_HYDROL_F5. False negative. [Graphical view]
ProtoNet	Search...
Other Resources
LinkHub	P38081.
NextBio	971087.

Entry information

Entry name

YBQ6_YEAST

Accession

Primary (citable) accession number: P38081

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 1, 1994
Last sequence update:	October 1, 1994
Last modified:	November 25, 2008
This is version 61 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

FPAP (Fungal Proteome Annotation Project)