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Protein

Uncharacterized glycosyl hydrolase YBR056W

Gene

YBR056W

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Miscellaneous

Present with 1960 molecules/cell in log phase SD medium.1 Publication

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei236Proton donorBy similarity1
Active sitei333NucleophileBy similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidase, Hydrolase

Enzyme and pathway databases

BioCyciYEAST:G3O-29027-MONOMER.

Protein family/group databases

CAZyiGH5. Glycoside Hydrolase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized glycosyl hydrolase YBR056W (EC:3.2.1.-)
Gene namesi
Ordered Locus Names:YBR056W
ORF Names:YBR0510
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:YBR056W.
SGDiS000000260. YBR056W.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001840551 – 501Uncharacterized glycosyl hydrolase YBR056WAdd BLAST501

Proteomic databases

MaxQBiP38081.
PRIDEiP38081.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
RSP5P399403EBI-21453,EBI-16219

Protein-protein interaction databases

BioGridi32758. 115 interactors.
DIPiDIP-5444N.
IntActiP38081. 16 interactors.
MINTiMINT-518368.
STRINGi4932.YBR056W.

Structurei

3D structure databases

ProteinModelPortaliP38081.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000248490.
InParanoidiP38081.
OMAiWMDSSIF.
OrthoDBiEOG092C26WB.

Family and domain databases

InterProiView protein in InterPro
IPR017853. Glycoside_hydrolase_SF.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

P38081-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIGSLRNKFE HFKVSEKGGQ NLSTTLPKLP PAKDLDRSTI YKYRYNYGVN
60 70 80 90 100
LGALFVLEPW IFSKETICTI DGKEYDSEFD AISQQLKKHS SEDVAKMLSD
110 120 130 140 150
HYKKYIDRID WEWLSKDAHI TALRIPIGYW HVEDGKHLDS LPFAPLRKVY
160 170 180 190 200
ELAKPWEKLG ELINNAKKMS IGVLIDLHGL PGGANCDSHS GSKSGEAAFF
210 220 230 240 250
HKEKYMTKVY KDILPAIINT MTLGNENIIG IQVVNEACFD NNPKGQKFYY
260 270 280 290 300
SEAINTVEKL QPGLPVIISD GWWPQQWADW VKEKHFSEIV VIDSHVYRCF
310 320 330 340 350
SDSDKSKDAN SIIKDLPNTV NFPHEDADYT VGEFSGVLDG QTWNKTSGDR
360 370 380 390 400
DAIVQKYVQT QADVFSHVAS WGWFFWTLQF EYGDGGEWGL APMMQKGNLP
410 420 430 440 450
KRPHGDDLQV DKKKIDSIIH EHEAYWNGKG KNFEHWRFED GIKTAVDDII
460 470 480 490 500
AFRKFDNSLI GRWHSWKSQR RAEYVSAKKD SEFMWEWDQG YQRGLDEFNK

Y
Length:501
Mass (Da):57,822
Last modified:October 1, 1994 - v1
Checksum:i5133A161736ADDD3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z35925 Genomic DNA. Translation: CAA84999.1.
Z46260 Genomic DNA. Translation: CAA86399.1.
BK006936 Genomic DNA. Translation: DAA07175.1.
PIRiS45914.
RefSeqiNP_009612.1. NM_001178404.1.

Genome annotation databases

EnsemblFungiiYBR056W; YBR056W; YBR056W.
GeneIDi852346.
KEGGisce:YBR056W.

Similar proteinsi

Entry informationi

Entry nameiYBQ6_YEAST
AccessioniPrimary (citable) accession number: P38081
Secondary accession number(s): D6VQ55
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: October 1, 1994
Last modified: September 27, 2017
This is version 130 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
  3. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  4. Yeast chromosome II
    Yeast (Saccharomyces cerevisiae) chromosome II: entries and gene names