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Protein

Inner membrane metabolite transport protein YdjE

Gene

ydjE

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

Biological processTransport

Enzyme and pathway databases

BioCyciEcoCyc:YDJE-MONOMER

Protein family/group databases

TCDBi2.A.1.1.92 the major facilitator superfamily (mfs)

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane metabolite transport protein YdjE
Gene namesi
Name:ydjE
Ordered Locus Names:b1769, JW1758
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12369 ydjE

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 20CytoplasmicSequence analysisAdd BLAST20
Transmembranei21 – 43Helical; Name=1Sequence analysisAdd BLAST23
Topological domaini44 – 57PeriplasmicSequence analysisAdd BLAST14
Transmembranei58 – 80Helical; Name=2Sequence analysisAdd BLAST23
Topological domaini81 – 91CytoplasmicSequence analysisAdd BLAST11
Transmembranei92 – 114Helical; Name=3Sequence analysisAdd BLAST23
Topological domaini115 – 117PeriplasmicSequence analysis3
Transmembranei118 – 140Helical; Name=4Sequence analysisAdd BLAST23
Topological domaini141 – 152CytoplasmicSequence analysisAdd BLAST12
Transmembranei153 – 175Helical; Name=5Sequence analysisAdd BLAST23
Topological domaini176 – 178PeriplasmicSequence analysis3
Transmembranei179 – 198Helical; Name=6Sequence analysisAdd BLAST20
Topological domaini199 – 265CytoplasmicSequence analysisAdd BLAST67
Transmembranei266 – 288Helical; Name=7Sequence analysisAdd BLAST23
Topological domaini289 – 297PeriplasmicSequence analysis9
Transmembranei298 – 320Helical; Name=8Sequence analysisAdd BLAST23
Topological domaini321 – 326CytoplasmicSequence analysis6
Transmembranei327 – 344Helical; Name=9Sequence analysisAdd BLAST18
Topological domaini345 – 353PeriplasmicSequence analysis9
Transmembranei354 – 376Helical; Name=10Sequence analysisAdd BLAST23
Topological domaini377 – 388CytoplasmicSequence analysisAdd BLAST12
Transmembranei389 – 411Helical; Name=11Sequence analysisAdd BLAST23
Topological domaini412 – 415PeriplasmicSequence analysis4
Transmembranei416 – 438Helical; Name=12Sequence analysisAdd BLAST23
Topological domaini439 – 452CytoplasmicSequence analysisAdd BLAST14

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000504841 – 452Inner membrane metabolite transport protein YdjEAdd BLAST452

Proteomic databases

PaxDbiP38055
PRIDEiP38055

Interactioni

Protein-protein interaction databases

BioGridi4259142, 243 interactors
STRINGi316385.ECDH10B_1907

Structurei

3D structure databases

ProteinModelPortaliP38055
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108KUU Bacteria
ENOG410XQKC LUCA
HOGENOMiHOG000114540
InParanoidiP38055
KOiK08369
OMAiKAGWLIG
PhylomeDBiP38055

Family and domain databases

CDDicd06174 MFS, 1 hit
InterProiView protein in InterPro
IPR020846 MFS_dom
IPR005828 MFS_sugar_transport-like
IPR036259 MFS_trans_sf
PfamiView protein in Pfam
PF00083 Sugar_tr, 1 hit
SUPFAMiSSF103473 SSF103473, 1 hit
PROSITEiView protein in PROSITE
PS50850 MFS, 1 hit

Sequencei

Sequence statusi: Complete.

P38055-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEQYDQIGAR LDRLPLARFH YRIFGIISFS LLLTGFLSYS GNVVLAKLVS
60 70 80 90 100
NGWSNNFLNA AFTSALMFGY FIGSLTGGFI GDYFGRRRAF RINLLIVGIA
110 120 130 140 150
ATGAAFVPDM YWLIFFRFLM GTGMGALIMV GYASFTEFIP ATVRGKWSAR
160 170 180 190 200
LSFVGNWSPM LSAAIGVVVI AFFSWRIMFL LGGIGILLAW FLSGKYFIES
210 220 230 240 250
PRWLAGKGQI AGAECQLREV EQQIEREKSI RLPPLTSYQS NSKVKVIKGT
260 270 280 290 300
FWLLFKGEML RRTLVAITVL IAMNISLYTI TVWIPTIFVN SGIDVDKSIL
310 320 330 340 350
MTAVIMIGAP VGIFIAALII DHFPRRLFGS TLLIIIAVLG YIYSIQTTEW
360 370 380 390 400
AILIYGLVMI FFLYMYVCFA SAVYIPELWP THLRLRGSGF VNAVGRIVAV
410 420 430 440 450
FTPYGVAALL THYGSITVFM VLGVMLLLCA LVLSIFGIET RKVSLEEISE

VN
Length:452
Mass (Da):50,318
Last modified:November 1, 1997 - v2
Checksum:i5A596DEA229205C2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74839.1
AP009048 Genomic DNA Translation: BAA15560.1
M26934 Genomic DNA No translation available.
PIRiA64937
RefSeqiNP_416283.1, NC_000913.3
WP_000438807.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74839; AAC74839; b1769
BAA15560; BAA15560; BAA15560
GeneIDi946274
KEGGiecj:JW1758
eco:b1769
PATRICifig|1411691.4.peg.485

Similar proteinsi

Entry informationi

Entry nameiYDJE_ECOLI
AccessioniPrimary (citable) accession number: P38055
Secondary accession number(s): P77244
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: November 1, 1997
Last modified: March 28, 2018
This is version 130 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health