Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized fimbrial-like protein YbgD

Gene

ybgD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Enzyme and pathway databases

BioCyciEcoCyc:EG12359-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized fimbrial-like protein YbgD
Gene namesi
Name:ybgD
Ordered Locus Names:b0719, JW0709
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12359 ybgD

Subcellular locationi

GO - Cellular componenti

  • pilus Source: UniProtKB-SubCell

Keywords - Cellular componenti

Fimbrium

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_000000925524 – 188Uncharacterized fimbrial-like protein YbgDAdd BLAST165

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi42 ↔ 81Sequence analysis

Keywords - PTMi

Disulfide bond

Proteomic databases

PaxDbiP37909
PRIDEiP37909

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
insO1P756802EBI-1119998,EBI-9152908

Protein-protein interaction databases

BioGridi4259940, 9 interactors
IntActiP37909, 26 interactors
STRINGi316385.ECDH10B_0786

Structurei

3D structure databases

ProteinModelPortaliP37909
SMRiP37909
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the fimbrial protein family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4106UBK Bacteria
ENOG410YS65 LUCA
HOGENOMiHOG000260127
InParanoidiP37909
OMAiCDLENSN
PhylomeDBiP37909

Family and domain databases

Gene3Di2.60.40.1090, 1 hit
InterProiView protein in InterPro
IPR000259 Adhesion_dom_fimbrial
IPR036937 Adhesion_dom_fimbrial_sf
IPR008966 Adhesion_dom_sf
PfamiView protein in Pfam
PF00419 Fimbrial, 1 hit
SUPFAMiSSF49401 SSF49401, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P37909-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFKGQKTLAA LAVSLLFTAP VYAADEGSGE IHFKGEVIEA PCEIHPEDID
60 70 80 90 100
KNIDLGQVTT THINREHHSN KVAVDIRLIN CDLPASDNGS GMPVSKVGVT
110 120 130 140 150
FDSTAKTTGA TPLLSNTSAG EATGVGVRLM DKNDGNIVLG SAAPDLDLDA
160 170 180
SSSEQTLNFF AWMEQIDNAV DVTAGEVTAN ATYVLDYK
Length:188
Mass (Da):19,838
Last modified:November 1, 1997 - v2
Checksum:iDC18B18CD73B4EC0
GO

Sequence cautioni

The sequence J01619 differs from that shown. Reason: Frameshift at position 98.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J01619 Genomic DNA No translation available.
U00096 Genomic DNA Translation: AAC73813.1
AP009048 Genomic DNA Translation: BAA35383.1
PIRiF64807
RefSeqiNP_415247.1, NC_000913.3
WP_000472412.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC73813; AAC73813; b0719
BAA35383; BAA35383; BAA35383
GeneIDi945325
KEGGiecj:JW0709
eco:b0719
PATRICifig|1411691.4.peg.1554

Similar proteinsi

Entry informationi

Entry nameiYBGD_ECOLI
AccessioniPrimary (citable) accession number: P37909
Secondary accession number(s): P75751
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: November 1, 1997
Last modified: March 28, 2018
This is version 123 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health