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P37890

- CBP1_ORYSJ

UniProt

P37890 - CBP1_ORYSJ

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Protein
Serine carboxypeptidase 1
Gene
CBP1, Os12g0257000, LOC_Os12g15470
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Release of a C-terminal amino acid with broad specificity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei194 – 1941 By similarity
Active sitei434 – 4341 By similarity
Active sitei487 – 4871 By similarity

GO - Molecular functioni

  1. serine-type carboxypeptidase activity Source: InterPro
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Keywords - Molecular functioni

    Carboxypeptidase, Hydrolase, Protease

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Serine carboxypeptidase 1 (EC:3.4.16.5)
    Alternative name(s):
    Carboxypeptidase C
    Serine carboxypeptidase I
    Cleaved into the following 2 chains:
    Alternative name(s):
    Serine carboxypeptidase I chain A
    Alternative name(s):
    Serine carboxypeptidase I chain B
    Gene namesi
    Name:CBP1
    Ordered Locus Names:Os12g0257000, LOC_Os12g15470
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 12

    Organism-specific databases

    GrameneiP37890.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2525 Reviewed prediction
    Add
    BLAST
    Propeptidei26 – 3611 Reviewed prediction
    PRO_0000004304Add
    BLAST
    Chaini37 – 510474Serine carboxypeptidase 1
    PRO_0000004305Add
    BLAST
    Chaini37 – 302266Serine carboxypeptidase 1 chain A By similarity
    PRO_0000274566Add
    BLAST
    Propeptidei303 – 36260Linker peptide By similarity
    PRO_0000274567Add
    BLAST
    Chaini363 – 510148Serine carboxypeptidase 1 chain B By similarity
    PRO_0000274568Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Disulfide bondi98 ↔ 399Interchain (between A and B chains) By similarity
    Glycosylationi154 – 1541N-linked (GlcNAc...) Reviewed prediction
    Disulfide bondi262 ↔ 274 By similarity
    Glycosylationi268 – 2681N-linked (GlcNAc...) Reviewed prediction
    Disulfide bondi297 ↔ 366Interchain (between A and B chains) By similarity
    Glycosylationi418 – 4181N-linked (GlcNAc...) Reviewed prediction

    Keywords - PTMi

    Disulfide bond, Glycoprotein, Zymogen

    Proteomic databases

    PaxDbiP37890.
    PRIDEiP37890.

    Interactioni

    Protein-protein interaction databases

    STRINGi39946.BGIOSIBCE036218.

    Structurei

    3D structure databases

    ProteinModelPortaliP37890.

    Family & Domainsi

    Motif

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Motifi508 – 5103Microbody targeting signal Reviewed prediction

    Sequence similaritiesi

    Belongs to the peptidase S10 family.

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG2939.
    KOiK16296.

    Family and domain databases

    Gene3Di3.40.50.1820. 2 hits.
    InterProiIPR029058. AB_hydrolase.
    IPR001563. Peptidase_S10.
    IPR018202. Peptidase_S10_AS.
    [Graphical view]
    PANTHERiPTHR11802. PTHR11802. 1 hit.
    PfamiPF00450. Peptidase_S10. 1 hit.
    [Graphical view]
    PRINTSiPR00724. CRBOXYPTASEC.
    SUPFAMiSSF53474. SSF53474. 2 hits.
    PROSITEiPS00560. CARBOXYPEPT_SER_HIS. 1 hit.
    PS00131. CARBOXYPEPT_SER_SER. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P37890-1 [UniParc]FASTAAdd to Basket

    « Hide

    MARRGRRSLA SPAVAIALFV FLAYGGGGGG GGVCEAAPAS AVVKSVPGFD    50
    GALPSKHYAG YVTVEEQHGR NLFYYLVESE RDPAKDPLVL WLNGGPGCSS 100
    FDGFVYEHGP FNFESGGSAK SLPKLHLNPY SWSKVSSVIY LDSPAGVGLS 150
    YSKNTSDYNT GDLKTAADSH TFLLKWFQLY PEFLSNPFYI AGESYAGVYV 200
    PTLSHEVVKG LHDGVKPTIN FKGYMVGNGV CDTVFDGNAL VPFAHGMALI 250
    SDDIYQEAQT ACHGNYWNTT TDKCENALYK VDTSINDLNI YDILEPCYHS 300
    KTIKKVTPAN TKLPKSFQHL GTTTKPLAVR TRMHGRAWPL RAPVRAGRVP 350
    SWQEFARGSR PSGVPCMSDE VATAWLNNDD VRAAIHAQPV SSIGSWLICT 400
    NVLDFIHDAG SMISYHKNLT GQGYRAFIYS GDHDMCVPYT GTEAWTRSLG 450
    YGVIDSWRPW HLNGQVSGYT QGYEHGLTFA TIKGAGHTVP EYKPQESLAF 500
    YSRWLAGSKL 510
    Length:510
    Mass (Da):55,710
    Last modified:October 1, 1994 - v1
    Checksum:i28896247FA1371CF
    GO

    Sequence conflict

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti253 – 2531D → G in AK064874. 1 Publication

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D17586 Genomic DNA. Translation: BAA04510.1.
    DP000011 Genomic DNA. Translation: ABA96977.2.
    AP008218 Genomic DNA. Translation: BAF29529.1.
    AK064874 mRNA. No translation available.
    PIRiS43516.
    RefSeqiNP_001066510.1. NM_001073042.1.
    UniGeneiOs.3451.

    Genome annotation databases

    EnsemblPlantsiOS12T0257000-01; OS12T0257000-01; OS12G0257000.
    GeneIDi4351908.
    KEGGiosa:4351908.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D17586 Genomic DNA. Translation: BAA04510.1 .
    DP000011 Genomic DNA. Translation: ABA96977.2 .
    AP008218 Genomic DNA. Translation: BAF29529.1 .
    AK064874 mRNA. No translation available.
    PIRi S43516.
    RefSeqi NP_001066510.1. NM_001073042.1.
    UniGenei Os.3451.

    3D structure databases

    ProteinModelPortali P37890.
    ModBasei Search...

    Protein-protein interaction databases

    STRINGi 39946.BGIOSIBCE036218.

    Proteomic databases

    PaxDbi P37890.
    PRIDEi P37890.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS12T0257000-01 ; OS12T0257000-01 ; OS12G0257000 .
    GeneIDi 4351908.
    KEGGi osa:4351908.

    Organism-specific databases

    Gramenei P37890.

    Phylogenomic databases

    eggNOGi COG2939.
    KOi K16296.

    Family and domain databases

    Gene3Di 3.40.50.1820. 2 hits.
    InterProi IPR029058. AB_hydrolase.
    IPR001563. Peptidase_S10.
    IPR018202. Peptidase_S10_AS.
    [Graphical view ]
    PANTHERi PTHR11802. PTHR11802. 1 hit.
    Pfami PF00450. Peptidase_S10. 1 hit.
    [Graphical view ]
    PRINTSi PR00724. CRBOXYPTASEC.
    SUPFAMi SSF53474. SSF53474. 2 hits.
    PROSITEi PS00560. CARBOXYPEPT_SER_HIS. 1 hit.
    PS00131. CARBOXYPEPT_SER_SER. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    « Hide 'large scale' publications
    1. "Cloning and sequencing of the gene for type I carboxypeptidase in rice."
      Washio K., Ishikawa K.
      Biochim. Biophys. Acta 1199:311-314(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: cv. Yukihikari.
    2. "The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications."
      The rice chromosomes 11 and 12 sequencing consortia
      BMC Biol. 3:20-20(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    4. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    5. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.

    Entry informationi

    Entry nameiCBP1_ORYSJ
    AccessioniPrimary (citable) accession number: P37890
    Secondary accession number(s): Q2QUQ3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1994
    Last sequence update: October 1, 1994
    Last modified: June 11, 2014
    This is version 98 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Peptidase families
      Classification of peptidase families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3

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