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Protein

Uncharacterized protein YhjY

Gene

yhjY

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG12269-MONOMER.
ECOL316407:JW5659-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YhjY
Gene namesi
Name:yhjY
Ordered Locus Names:b3548, JW5659
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12269. yhjY.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 232232Uncharacterized protein YhjYPRO_0000169586Add
BLAST

Proteomic databases

PaxDbiP37663.

Interactioni

Protein-protein interaction databases

BioGridi4261373. 153 interactions.
STRINGi511145.b3548.

Structurei

3D structure databases

ProteinModelPortaliP37663.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 232232AutotransporterPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 autotransporter (TC 1.B.12) domain. [View classification]PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4105EAX. Bacteria.
COG5571. LUCA.
HOGENOMiHOG000125992.
OMAiSERYTWD.
OrthoDBiEOG6K9QGB.

Family and domain databases

Gene3Di2.40.128.130. 1 hit.
InterProiIPR005546. Autotransporte_beta.
IPR016955. Autotranspt_YhjY_prd.
IPR006315. OM_autotransptr_brl.
[Graphical view]
PfamiPF03797. Autotransporter. 1 hit.
[Graphical view]
PIRSFiPIRSF030748. Autotransporter_YhjY_prd. 1 hit.
SUPFAMiSSF103515. SSF103515. 1 hit.
TIGRFAMsiTIGR01414. autotrans_barl. 1 hit.
PROSITEiPS51208. AUTOTRANSPORTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P37663-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIIKKSGGRW QLSLLASVVI SAFFLNTAYA WQQEYIVDTQ PGLSTERYTW
60 70 80 90 100
DSDHQPDYND ILSQRIQSSQ RALGLEVNLA EETPVDVTSS MSMGWNFPLY
110 120 130 140 150
EQVTTGPVAA LHYDGTTTSM YNEFGDSTTT LTDPLWHASV STLGWRVDSR
160 170 180 190 200
LGDLRPWAQI SYNQQFGENI WKAQSGLSRM TATNQNGNWL DVTVGADMLL
210 220 230
NQNIAAYAAL TQAENTTNNS DYLYTMGVSA RF
Length:232
Mass (Da):25,951
Last modified:October 1, 1994 - v1
Checksum:i1943B917F8248B74
GO

Sequence cautioni

The sequence AAB18525.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00039 Genomic DNA. Translation: AAB18525.1. Different initiation.
U00096 Genomic DNA. Translation: AAC76572.2.
AP009048 Genomic DNA. Translation: BAE77747.1.
PIRiS47769.
RefSeqiNP_418004.4. NC_000913.3.
WP_001299523.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76572; AAC76572; b3548.
BAE77747; BAE77747; BAE77747.
GeneIDi948073.
KEGGiecj:JW5659.
eco:b3548.
PATRICi32122568. VBIEscCol129921_3661.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00039 Genomic DNA. Translation: AAB18525.1. Different initiation.
U00096 Genomic DNA. Translation: AAC76572.2.
AP009048 Genomic DNA. Translation: BAE77747.1.
PIRiS47769.
RefSeqiNP_418004.4. NC_000913.3.
WP_001299523.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP37663.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261373. 153 interactions.
STRINGi511145.b3548.

Proteomic databases

PaxDbiP37663.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76572; AAC76572; b3548.
BAE77747; BAE77747; BAE77747.
GeneIDi948073.
KEGGiecj:JW5659.
eco:b3548.
PATRICi32122568. VBIEscCol129921_3661.

Organism-specific databases

EchoBASEiEB2178.
EcoGeneiEG12269. yhjY.

Phylogenomic databases

eggNOGiENOG4105EAX. Bacteria.
COG5571. LUCA.
HOGENOMiHOG000125992.
OMAiSERYTWD.
OrthoDBiEOG6K9QGB.

Enzyme and pathway databases

BioCyciEcoCyc:EG12269-MONOMER.
ECOL316407:JW5659-MONOMER.

Miscellaneous databases

PROiP37663.

Family and domain databases

Gene3Di2.40.128.130. 1 hit.
InterProiIPR005546. Autotransporte_beta.
IPR016955. Autotranspt_YhjY_prd.
IPR006315. OM_autotransptr_brl.
[Graphical view]
PfamiPF03797. Autotransporter. 1 hit.
[Graphical view]
PIRSFiPIRSF030748. Autotransporter_YhjY_prd. 1 hit.
SUPFAMiSSF103515. SSF103515. 1 hit.
TIGRFAMsiTIGR01414. autotrans_barl. 1 hit.
PROSITEiPS51208. AUTOTRANSPORTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes."
    Sofia H.J., Burland V., Daniels D.L., Plunkett G. III, Blattner F.R.
    Nucleic Acids Res. 22:2576-2586(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYHJY_ECOLI
AccessioniPrimary (citable) accession number: P37663
Secondary accession number(s): P76714, Q2M7K9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: October 1, 1994
Last modified: January 20, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.