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Protein

Inner membrane protein YhiM

Gene

yhiM

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2489.
ECOL316407:JW5944-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YhiM
Gene namesi
Name:yhiM
Ordered Locus Names:b3491, JW5944
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12228. yhiM.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 2CytoplasmicSequence analysis2
Transmembranei3 – 23HelicalSequence analysisAdd BLAST21
Topological domaini24 – 41PeriplasmicSequence analysisAdd BLAST18
Transmembranei42 – 62HelicalSequence analysisAdd BLAST21
Topological domaini63 – 74CytoplasmicSequence analysisAdd BLAST12
Transmembranei75 – 95HelicalSequence analysisAdd BLAST21
Topological domaini96 – 104PeriplasmicSequence analysis9
Transmembranei105 – 125HelicalSequence analysisAdd BLAST21
Topological domaini126 – 157CytoplasmicSequence analysisAdd BLAST32
Transmembranei158 – 178HelicalSequence analysisAdd BLAST21
Topological domaini179 – 190PeriplasmicSequence analysisAdd BLAST12
Transmembranei191 – 211HelicalSequence analysisAdd BLAST21
Topological domaini212 – 225CytoplasmicSequence analysisAdd BLAST14
Transmembranei226 – 246HelicalSequence analysisAdd BLAST21
Topological domaini247 – 257PeriplasmicSequence analysisAdd BLAST11
Transmembranei258 – 278HelicalSequence analysisAdd BLAST21
Topological domaini279 – 290CytoplasmicSequence analysisAdd BLAST12
Transmembranei291 – 311HelicalSequence analysisAdd BLAST21
Topological domaini312 – 324PeriplasmicSequence analysisAdd BLAST13
Transmembranei325 – 345HelicalSequence analysisAdd BLAST21
Topological domaini346 – 350CytoplasmicSequence analysis5

GO - Cellular componenti

  • integral component of plasma membrane Source: EcoCyc
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001695641 – 350Inner membrane protein YhiMAdd BLAST350

Proteomic databases

PaxDbiP37630.
PRIDEiP37630.

Interactioni

Protein-protein interaction databases

BioGridi4261268. 134 interactors.
STRINGi511145.b3491.

Structurei

3D structure databases

ProteinModelPortaliP37630.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4107UNS. Bacteria.
ENOG410ZE9J. LUCA.
HOGENOMiHOG000125793.
InParanoidiP37630.

Family and domain databases

InterProiIPR021240. DUF2776.
[Graphical view]
PfamiPF10951. DUF2776. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P37630-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNIYIGWLFK LIPLIMGLIC IALGGFVLES SGQSEYFVAG HVLISLAAIC
60 70 80 90 100
LALFTTAFII ISQLTRGVNT FYNTLFPIIG YAGSIITMIW GWALLAGNDV
110 120 130 140 150
MADEFVAGHV IFGVGMIAAC VSTVAASSGH FLLIPKNAAG SKSDGTPVQA
160 170 180 190 200
YSSLIGNCLI AVPVLLTLLG FIWSITLLRS ADITPHYVAG HVLLGLTAIC
210 220 230 240 250
ACLIGLVATI VHQTRNTFST KEHWLWCYWV IFLGSITVLQ GIYVLVSSDA
260 270 280 290 300
SARLAPGIIL ICLGMICYSI FSKVWLLALV WRRTCSLANR IPMIPVFTCL
310 320 330 340 350
FCLFLASFLA EMAQTDMGYF IPSRVLVGLG AVCFTLFSIV SILEAGSAKK
Length:350
Mass (Da):37,657
Last modified:November 24, 2009 - v2
Checksum:i06F32A844577C549
GO

Sequence cautioni

The sequence AAB18467 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00039 Genomic DNA. Translation: AAB18467.1. Different initiation.
U00096 Genomic DNA. Translation: AAC76516.4.
AP009048 Genomic DNA. Translation: BAE77803.1.
PIRiS47711.
RefSeqiNP_417948.4. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAC76516; AAC76516; b3491.
BAE77803; BAE77803; BAE77803.
GeneIDi947997.
KEGGiecj:JW5944.
eco:b3491.
PATRICi32122430. VBIEscCol129921_3592.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00039 Genomic DNA. Translation: AAB18467.1. Different initiation.
U00096 Genomic DNA. Translation: AAC76516.4.
AP009048 Genomic DNA. Translation: BAE77803.1.
PIRiS47711.
RefSeqiNP_417948.4. NC_000913.3.

3D structure databases

ProteinModelPortaliP37630.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261268. 134 interactors.
STRINGi511145.b3491.

Proteomic databases

PaxDbiP37630.
PRIDEiP37630.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76516; AAC76516; b3491.
BAE77803; BAE77803; BAE77803.
GeneIDi947997.
KEGGiecj:JW5944.
eco:b3491.
PATRICi32122430. VBIEscCol129921_3592.

Organism-specific databases

EchoBASEiEB2140.
EcoGeneiEG12228. yhiM.

Phylogenomic databases

eggNOGiENOG4107UNS. Bacteria.
ENOG410ZE9J. LUCA.
HOGENOMiHOG000125793.
InParanoidiP37630.

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2489.
ECOL316407:JW5944-MONOMER.

Miscellaneous databases

PROiP37630.

Family and domain databases

InterProiIPR021240. DUF2776.
[Graphical view]
PfamiPF10951. DUF2776. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYHIM_ECOLI
AccessioniPrimary (citable) accession number: P37630
Secondary accession number(s): P76704, Q2M7F3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: November 24, 2009
Last modified: November 2, 2016
This is version 99 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.