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Protein

Inner membrane protein YhhQ

Gene

yhhQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG12217-MONOMER.
ECOL316407:JW3436-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YhhQ
Gene namesi
Name:yhhQ
Ordered Locus Names:b3471, JW3436
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12217. yhhQ.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 12CytoplasmicSequence analysisAdd BLAST12
Transmembranei13 – 32HelicalSequence analysisAdd BLAST20
Topological domaini33 – 41PeriplasmicSequence analysis9
Transmembranei42 – 64HelicalSequence analysisAdd BLAST23
Topological domaini65 – 70CytoplasmicSequence analysis6
Transmembranei71 – 93HelicalSequence analysisAdd BLAST23
Topological domaini94 – 107PeriplasmicSequence analysisAdd BLAST14
Transmembranei108 – 130HelicalSequence analysisAdd BLAST23
Topological domaini131 – 141CytoplasmicSequence analysisAdd BLAST11
Transmembranei142 – 164HelicalSequence analysisAdd BLAST23
Topological domaini165 – 178PeriplasmicSequence analysisAdd BLAST14
Transmembranei179 – 201HelicalSequence analysisAdd BLAST23
Topological domaini202 – 221CytoplasmicSequence analysisAdd BLAST20

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001695561 – 221Inner membrane protein YhhQAdd BLAST221

Proteomic databases

PaxDbiP37619.
PRIDEiP37619.

Interactioni

Protein-protein interaction databases

STRINGi511145.b3471.

Structurei

3D structure databases

ProteinModelPortaliP37619.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To H.influenzae HI_0862.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105EX9. Bacteria.
COG1738. LUCA.
HOGENOMiHOG000284591.
InParanoidiP37619.
KOiK09125.
OMAiRSTDAFM.
PhylomeDBiP37619.

Family and domain databases

InterProiIPR003744. DUF165.
[Graphical view]
PfamiPF02592. Vut_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00697. TIGR00697. 1 hit.

Sequencei

Sequence statusi: Complete.

P37619-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNVFSQTQRY KALFWLSLFH LLVITSSNYL VQLPVSILGF HTTWGAFSFP
60 70 80 90 100
FIFLATDLTV RIFGAPLARR IIFAVMIPAL LISYVISSLF YMGSWQGFGA
110 120 130 140 150
LAHFNLFVAR IATASFMAYA LGQILDVHVF NRLRQSRRWW LAPTASTLFG
160 170 180 190 200
NVSDTLAFFF IAFWRSPDAF MAEHWMEIAL VDYCFKVLIS IVFFLPMYGV
210 220
LLNMLLKRLA DKSEINALQA S
Length:221
Mass (Da):25,269
Last modified:October 1, 1994 - v1
Checksum:iE3D90237BEE7ABCC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00039 Genomic DNA. Translation: AAB18446.1.
U00096 Genomic DNA. Translation: AAC76496.1.
AP009048 Genomic DNA. Translation: BAE77822.1.
PIRiS47690.
RefSeqiNP_417928.1. NC_000913.3.
WP_001100469.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76496; AAC76496; b3471.
BAE77822; BAE77822; BAE77822.
GeneIDi947984.
KEGGiecj:JW3436.
eco:b3471.
PATRICi32122386. VBIEscCol129921_3570.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00039 Genomic DNA. Translation: AAB18446.1.
U00096 Genomic DNA. Translation: AAC76496.1.
AP009048 Genomic DNA. Translation: BAE77822.1.
PIRiS47690.
RefSeqiNP_417928.1. NC_000913.3.
WP_001100469.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP37619.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi511145.b3471.

Proteomic databases

PaxDbiP37619.
PRIDEiP37619.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76496; AAC76496; b3471.
BAE77822; BAE77822; BAE77822.
GeneIDi947984.
KEGGiecj:JW3436.
eco:b3471.
PATRICi32122386. VBIEscCol129921_3570.

Organism-specific databases

EchoBASEiEB2131.
EcoGeneiEG12217. yhhQ.

Phylogenomic databases

eggNOGiENOG4105EX9. Bacteria.
COG1738. LUCA.
HOGENOMiHOG000284591.
InParanoidiP37619.
KOiK09125.
OMAiRSTDAFM.
PhylomeDBiP37619.

Enzyme and pathway databases

BioCyciEcoCyc:EG12217-MONOMER.
ECOL316407:JW3436-MONOMER.

Miscellaneous databases

PROiP37619.

Family and domain databases

InterProiIPR003744. DUF165.
[Graphical view]
PfamiPF02592. Vut_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00697. TIGR00697. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYHHQ_ECOLI
AccessioniPrimary (citable) accession number: P37619
Secondary accession number(s): Q2M7D4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: October 1, 1994
Last modified: November 2, 2016
This is version 114 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.