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Reviewed, UniProtKB/Swiss-Prot P37555 (YABM_BACSU)

Last modified November 24, 2009. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Uncharacterized membrane protein yabM
Gene names
Name: yabM
Ordered Locus Names: BSU00570
OrganismBacillus subtilis [Complete proteome] [HAMAP]
Taxonomic identifier1423 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

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Protein attributes

Sequence length532 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

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General annotation (Comments)

Subcellular location

Cell membrane; Multi-pass membrane protein Probable.

Sequence similarities

Belongs to the polysaccharide synthase family.

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Ontologies

Keywords
   Cellular componentCell membrane
Membrane
   DomainTransmembrane
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processpolysaccharide biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

plasma membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 532532Uncharacterized membrane protein yabM
PRO_0000166455

Regions

Transmembrane25 – 4521 Potential
Transmembrane65 – 8521 Potential
Transmembrane109 – 12921 Potential
Transmembrane134 – 15421 Potential
Transmembrane179 – 19921 Potential
Transmembrane203 – 22321 Potential
Transmembrane248 – 26821 Potential
Transmembrane302 – 32221 Potential
Transmembrane344 – 36421 Potential
Transmembrane371 – 39121 Potential
Transmembrane392 – 41221 Potential
Transmembrane425 – 44521 Potential
Transmembrane459 – 47921 Potential
Transmembrane494 – 51421 Potential

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Sequences

Sequence LengthMass (Da)Tools
P37555-1 [UniParc].

Last modified October 1, 1994. Version 1.
Checksum: DAAACAF32903E553

FASTA53257,357
        10         20         30         40         50         60 
MDDSIGVKRH WIWQGAFVLI LAGVITKILS AVYRVPFQNI VGDVGFYIYQ QVYPFLGIAV 

        70         80         90        100        110        120 
MLSTSGFPVI ISKLMNDYSE KNHHTILKIS ALFLSLIGIL LFLCLYLGAV PIALFMGDSH 

       130        140        150        160        170        180 
LAVLIQVAAY AFLLFPFVAL LRGGFQGRHE MLPSALSQMT EQFLRVAVLL GLSFWLVKKG 

       190        200        210        220        230        240 
ASLYTAGAAA ASGSLAGSLV ALIILGFFWF KTKRDNQTDR QNENVITTKE LTKKLLLYSV 

       250        260        270        280        290        300 
TICVSSLLLL FIQLVDALNL YALLSGGEAS EEAKCLKGIY DRGQPLLQLG SVFAVSIATS 

       310        320        330        340        350        360 
LVPYISMAVK NKELKIMKEK ITSSLKLCLV LGTGASAGLI CILKPVNIML FQNGEGTGAL 

       370        380        390        400        410        420 
QVFSCSILFA SLAVTAAAVL QGAGYTVFPA IAVGAGVAVK WVLNTLLVPR YGIEGASLAT 

       430        440        450        460        470        480 
AASFAAVAGL NLYQLRQKEW LDKLRGVLIP IIGSALLMSA VLLAYTRLWT FLFPATGRGA 

       490        500        510        520        530 
AVIESLSAVA IGGAVFIYCM MRLGIFTDEE LNSVPFGSKL SKFMRRREQN GG

« Hide

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References

« Hide 'large scale' references
[1]"Systematic sequencing of the 180 kilobase region of the Bacillus subtilis chromosome containing the replication origin."
Ogasawara N., Nakai S., Yoshikawa H.
DNA Res. 1:1-14(1994) [PubMed: 7584024] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: 168.
[2]"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. expand/collapse author list , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
Nature 390:249-256(1997) [PubMed: 9384377] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 168.

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Cross-references

Sequence databases

D26185 Genomic DNA. Translation: BAA05292.1.
AL009126 Genomic DNA. Translation: CAB11833.1.
PIRS66087.
RefSeqNP_387938.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID936539.
GenomeReviewsGene locus BSU00570 in contig AL009126_GR.
KEGGbsu:BSU00570.
NMPDRfig|224308.1.peg.57.

Organism-specific databases

SubtiListBG10120. yabM. [Micado]
CMRSearch...

Phylogenomic databases

HOGENOMP37555.
OMAYQQIYPF

Family and domain databases

InterProIPR002797. Polysacc_synt.
[Graphical view]
PfamPF01943. Polysacc_synt. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameYABM_BACSU
AccessionPrimary (citable) accession number: P37555
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: October 1, 1994
Last modified: November 24, 2009
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

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Relevant documents

Bacillus subtilis

Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents