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P37531 (YAAH_BACSU) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 85. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Spore germination protein yaaH
Gene names
Name:yaaH
Ordered Locus Names:BSU00160
OrganismBacillus subtilis
Taxonomic identifier1423 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length427 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

May be required for the L-alanine-stimulated germination pathway. Ref.3

Subcellular location

Spore wall Probable. Note: Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat.

Developmental stage

Expressed in the mother cell compartment from T2 of sporulation.

Domain

LysM repeats are thought to be involved in peptidoglycan binding.

Miscellaneous

Transcribed by the sigE RNA polymerase.

Inactivation of the yaaH gene does not impair vegetative growth nor prevent the development of resistance to heat, chloroform and lysozyme.

Sequence similarities

Contains 2 LysM repeats.

Ontologies

Keywords
   Biological processGermination
   DomainRepeat
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processcell wall macromolecule catabolic process

Inferred from electronic annotation. Source: InterPro

chitin catabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentspore wall

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functioncation binding

Inferred from electronic annotation. Source: InterPro

chitinase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 427427Spore germination protein yaaH
PRO_0000049432

Regions

Repeat1 – 4343LysM 1
Repeat49 – 9244LysM 2

Sequences

Sequence LengthMass (Da)Tools
P37531 [UniParc].

Last modified October 1, 1994. Version 1.
Checksum: 77FEF6AB327379A3

FASTA42748,637
        10         20         30         40         50         60 
MVKQGDTLSA IASQYRTTTN DITETNEIPN PDSLVVGQTI VIPIAGQFYD VKRGDTLTSI 

        70         80         90        100        110        120 
ARQFNTTAAE LARVNRIQLN TVLQIGFRLY IPPAPKRDIE SNAYLEPRGN QVSENLQQAA 

       130        140        150        160        170        180 
REASPYLTYL GAFSFQAQRN GTLVAPPLTN LRSITESQNT TLMMIITNLE NQAFSDELGR 

       190        200        210        220        230        240 
ILLNDETVKR RLLNEIVENA RRYGFRDIHF DFEYLRPQDR EAYNQFLREA RDLFHREGLE 

       250        260        270        280        290        300 
ISTALAPKTS ATQQGRWYEA HDYRAHGEIV DFVVLMTYEW GYSGGPPQAV SPIGPVRDVI 

       310        320        330        340        350        360 
EYALTEMPAN KIVMGQNLYG YDWTLPYTAG GTPARAVSPQ QAIVIADQNN ASIQYDQTAQ 

       370        380        390        400        410        420 
APFFRYTDAE NRRHEVWFED ARSIQAKFNL IKELNLRGIS YWKLGLSFPQ NWLLLSDQFN 


VVKKTFR

« Hide

References

« Hide 'large scale' references
[1]"Systematic sequencing of the 180 kilobase region of the Bacillus subtilis chromosome containing the replication origin."
Ogasawara N., Nakai S., Yoshikawa H.
DNA Res. 1:1-14(1994) [PubMed: 7584024] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: 168.
[2]"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. expand/collapse author list , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
Nature 390:249-256(1997) [PubMed: 9384377] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 168.
[3]"The Bacillus subtilis yaaH gene is transcribed by SigE RNA polymerase during sporulation, and its product is involved in germination of spores."
Kodama T., Takamatsu H., Asai K., Kobayashi K., Ogasawara N., Watabe K.
J. Bacteriol. 181:4584-4591(1999) [PubMed: 10419957] [Abstract]
Cited for: FUNCTION, EXPRESSION.
Strain: 168.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		D26185 Genomic DNA. Translation: BAA05252.1.
AL009126 Genomic DNA. Translation: CAB11792.1.
PIRS66046.
RefSeqNP_387897.1. NC_000964.3.

3D structure databases

ProteinModelPortalP37531.
SMRP37531. Positions 1-97, 122-407.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBACT00000003011; EBBACP00000003011; EBBACG00000003005.
GeneID937029.
GenomeReviewsGene locus BSU00160 in contig AL009126_GR.
KEGGbsu:BSU00160.
NMPDRfig|224308.1.peg.16.
PATRIC18971493. VBIBacSub10457_0017.

Organism-specific databases

GenoListBSU00160.

Phylogenomic databases

GeneTreeEBGT00050000000551.
HOGENOMHBG337948.
OMAWYEAHDY.
PhylomeDBP37531.
ProtClustDBCLSK873277.

Enzyme and pathway databases

BioCycBSUB:BSU00160-MONOMER.

Family and domain databases

InterProIPR011583. Chitinase_II.
IPR001223. Glyco_hydro18cat.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR018392. Peptidoglycan-bd_lysin.
IPR002482. Peptidoglycan-bd_Lysin_subgr.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.
KOK06306.
PfamPF00704. Glyco_hydro_18. 1 hit.
PF01476. LysM. 2 hits.
[Graphical view]
SMARTSM00636. Glyco_18. 1 hit.
SM00257. LysM. 2 hits.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameYAAH_BACSU
AccessionPrimary (citable) accession number: P37531
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: October 1, 1994
Last modified: January 25, 2012
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Bacillus subtilis

Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

SIMILARITY comments

Index of protein domains and families

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