Reviewed,
UniProtKB/Swiss-Prot P37531 (YAAH_BACSU)
Last modified
December 15, 2009.
Version 69.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Spore germination protein yaaH | ||||
| Gene names |
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| Organism | Bacillus subtilis [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 1423 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus |
Protein attributes
| Sequence length | 427 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Function | May be required for the L-alanine-stimulated germination pathway. Ref.3 |
| Subcellular location | Spore wall Probable. Note: Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat. |
| Developmental stage | Expressed in the mother cell compartment from T2 of sporulation. |
| Domain | LysM repeats are thought to be involved in peptidoglycan binding. |
| Miscellaneous | Transcribed by the sigE RNA polymerase. Inactivation of the yaaH gene does not impair vegetative growth nor prevent the development of resistance to heat, chloroform and lysozyme. |
| Sequence similarities | Contains 2 LysM repeats. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Germination |
| Domain | Repeat |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic processInferred from electronic annotation. Source: InterPro |
| Cellular component | spore wall Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | cation binding Inferred from electronic annotation. Source: InterPro chitinase activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Systematic sequencing of the 180 kilobase region of the Bacillus subtilis chromosome containing the replication origin." Ogasawara N., Nakai S., Yoshikawa H. DNA Res. 1:1-14(1994) [PubMed: 7584024] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: 168. |
| [2] | "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis." Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. Danchin A.Nature 390:249-256(1997) [PubMed: 9384377] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 168. |
| [3] | "The Bacillus subtilis yaaH gene is transcribed by SigE RNA polymerase during sporulation, and its product is involved in germination of spores." Kodama T., Takamatsu H., Asai K., Kobayashi K., Ogasawara N., Watabe K. J. Bacteriol. 181:4584-4591(1999) [PubMed: 10419957] [Abstract] Cited for: FUNCTION, EXPRESSION. Strain: 168. |
Cross-references
Sequence databases | |
|---|---|
| D26185 Genomic DNA. Translation: BAA05252.1. AL009126 Genomic DNA. Translation: CAB11792.1. | |
| PIR | S66046. |
| RefSeq | NP_387897.1. |
3D structure databases | |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 937029. |
| GenomeReviews | Gene locus BSU00160 in contig AL009126_GR. |
| KEGG | bsu:BSU00160. |
| NMPDR | fig|224308.1.peg.16. |
Organism-specific databases | |
| SubtiList | BG10080. yaaH. [Micado] |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HBG337948. |
| OMA | MGQNLYG. |
Family and domain databases | |
| InterPro | IPR011583. Chitinase_II. IPR001223. Glyco_hydro18cat. IPR017853. Glyco_hydro_catalytic_core. IPR013781. Glyco_hydro_sg_catalytic. IPR018392. Peptidoglycan-bd_lysin. IPR002482. Peptidoglycan-bd_Lysin_sg. [Graphical view] |
| Gene3D | G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. |
| Pfam | PF00704. Glyco_hydro_18. 1 hit. PF01476. LysM. 2 hits. [Graphical view] |
| SMART | SM00636. Glyco_18. 1 hit. SM00257. LysM. 2 hits. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | YAAH_BACSU | ||||||||
| Accession | Primary (citable) accession number: P37531 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| Bacillus subtilis Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList |
| SIMILARITY comments Index of protein domains and families |

Clusters with


