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Protein

Uncharacterized fimbrial-like protein YadM

Gene

yadM

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches.1 Publication

Miscellaneous

The operon is cryptic under classical laboratory conditions, but is functional when constitutively expressed.1 Publication

GO - Biological processi

  • cell adhesion Source: EcoCyc

Enzyme and pathway databases

BioCyciEcoCyc:EG12327-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized fimbrial-like protein YadM
Gene namesi
Name:yadM
Ordered Locus Names:b0138, JW0134
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12327 yadM

Subcellular locationi

GO - Cellular componenti

  • pilus Source: UniProtKB-SubCell

Keywords - Cellular componenti

Fimbrium

Pathology & Biotechi

Disruption phenotypei

Deletion of the operon under classical laboratory conditions does not result in any major effect on E.coli capacity to form biofilms compared with the wild-type strain.1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_000001378324 – 189Uncharacterized fimbrial-like protein YadMAdd BLAST166

Proteomic databases

PaxDbiP37018
PRIDEiP37018

Expressioni

Inductioni

Repressed by H-NS.1 Publication

Interactioni

Protein-protein interaction databases

BioGridi4259741, 9 interactors
STRINGi316385.ECDH10B_0118

Structurei

3D structure databases

ProteinModelPortaliP37018
SMRiP37018
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the fimbrial protein family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108XEY Bacteria
ENOG410Y46X LUCA
HOGENOMiHOG000116900
OMAiANEVEMT

Family and domain databases

Gene3Di2.60.40.1090, 1 hit
InterProiView protein in InterPro
IPR000259 Adhesion_dom_fimbrial
IPR036937 Adhesion_dom_fimbrial_sf
IPR008966 Adhesion_dom_sf
PfamiView protein in Pfam
PF00419 Fimbrial, 1 hit
SUPFAMiSSF49401 SSF49401, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P37018-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIKTTPHKIV ILMGILLSPS VFATDINVEF TATVKATTCN ITLTGNNVTN
60 70 80 90 100
DGNNNYTLRI PKMGLDKIAN KTTESQADFK LVASGCSSGI SWIDTTLTGN
110 120 130 140 150
ASSSSPKLII PQSGDSSSTT SNIGMGFKKR TTDDATFLKP NSAEKIRWST
160 170 180
DEMQPDKGLE MTVALRETDA GQGVPGNFRA LATFNFIYQ
Length:189
Mass (Da):20,307
Last modified:June 1, 1994 - v1
Checksum:iC84CB14D0CBBA3D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC73249.2
AP009048 Genomic DNA Translation: BAB96715.1
RefSeqiNP_414680.4, NC_000913.3
WP_000598300.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC73249; AAC73249; b0138
BAB96715; BAB96715; BAB96715
GeneIDi944828
KEGGiecj:JW0134
eco:b0138
PATRICifig|1411691.4.peg.2143

Similar proteinsi

Entry informationi

Entry nameiYADM_ECOLI
AccessioniPrimary (citable) accession number: P37018
Secondary accession number(s): P75661
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: June 1, 1994
Last modified: March 28, 2018
This is version 113 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

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