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Protein

Uncharacterized chaperone protein YegD

Gene

yegD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Chaperone

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciEcoCyc:EG12200-MONOMER.
ECOL316407:JW2054-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized chaperone protein YegD
Gene namesi
Name:yegD
Ordered Locus Names:b2069, JW2054
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12200. yegD.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 450450Uncharacterized chaperone protein YegDPRO_0000078660Add
BLAST

Proteomic databases

PaxDbiP36928.
PRIDEiP36928.

Interactioni

Protein-protein interaction databases

BioGridi4259695. 204 interactions.
IntActiP36928. 6 interactions.
STRINGi511145.b2069.

Structurei

3D structure databases

ProteinModelPortaliP36928.
SMRiP36928. Positions 3-430.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the heat shock protein 70 family.Curated

Phylogenomic databases

eggNOGiENOG4105R8A. Bacteria.
COG0443. LUCA.
HOGENOMiHOG000255689.
InParanoidiP36928.
KOiK04046.
OMAiHEYLEGY.
OrthoDBiEOG647TX3.
PhylomeDBiP36928.

Family and domain databases

InterProiIPR018181. Heat_shock_70_CS.
IPR013126. Hsp_70_fam.
[Graphical view]
PfamiPF00012. HSP70. 2 hits.
[Graphical view]
PROSITEiPS00329. HSP70_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P36928-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFIGFDYGTA NCSVAVMRDG KPHLLKMEND STLLPSMLCA PTREAVSEWL
60 70 80 90 100
YRHHDVPADD DETQALLRRA IRYNREEDID VTAKSVQFGL SSLAQYIDDP
110 120 130 140 150
EEVWFVKSPK SFLGASGLKP QQVALFEDLV CAMMLHIRQQ AQAQLPEAIT
160 170 180 190 200
QAVIGRPINF QGLGGDEANT QAQGILERAA KRAGFRDVVF QYEPVAAGLD
210 220 230 240 250
YEATLQEEKR VLVVDIGGGT TDCSLLLMGP QWRSRLDREA SLLGHSGCRI
260 270 280 290 300
GGNDLDIALA FKNLMPLLGM GGETEKGIAL PILPWWNAVA INDVPAQSDF
310 320 330 340 350
YSSANGRLLN DLVRDAREPE KVALLQKVWR QRLSYRLVRS AEECKIALSS
360 370 380 390 400
VAETRASLPF ISNELATLIS QRGLESALSQ PLTRILEQVQ LALDNAQEKP
410 420 430 440 450
DVIYLTGGSA RSPLIKKALA EQLPGIPIAG GDDFGSVTAG LARWAEVVFR
Length:450
Mass (Da):49,371
Last modified:November 1, 1997 - v2
Checksum:iC25A8AE1D6F44C2D
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti145 – 1473LPE → GIL (PubMed:6094528).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75130.2.
AP009048 Genomic DNA. Translation: BAA15927.1.
K02498 Genomic DNA. No translation available.
PIRiD64973.
RefSeqiNP_416573.4. NC_000913.3.
WP_000469708.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75130; AAC75130; b2069.
BAA15927; BAA15927; BAA15927.
GeneIDi947234.
KEGGiecj:JW2054.
eco:b2069.
PATRICi32119471. VBIEscCol129921_2146.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75130.2.
AP009048 Genomic DNA. Translation: BAA15927.1.
K02498 Genomic DNA. No translation available.
PIRiD64973.
RefSeqiNP_416573.4. NC_000913.3.
WP_000469708.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP36928.
SMRiP36928. Positions 3-430.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259695. 204 interactions.
IntActiP36928. 6 interactions.
STRINGi511145.b2069.

Proteomic databases

PaxDbiP36928.
PRIDEiP36928.

Protocols and materials databases

DNASUi947234.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75130; AAC75130; b2069.
BAA15927; BAA15927; BAA15927.
GeneIDi947234.
KEGGiecj:JW2054.
eco:b2069.
PATRICi32119471. VBIEscCol129921_2146.

Organism-specific databases

EchoBASEiEB2116.
EcoGeneiEG12200. yegD.

Phylogenomic databases

eggNOGiENOG4105R8A. Bacteria.
COG0443. LUCA.
HOGENOMiHOG000255689.
InParanoidiP36928.
KOiK04046.
OMAiHEYLEGY.
OrthoDBiEOG647TX3.
PhylomeDBiP36928.

Enzyme and pathway databases

BioCyciEcoCyc:EG12200-MONOMER.
ECOL316407:JW2054-MONOMER.

Miscellaneous databases

PROiP36928.

Family and domain databases

InterProiIPR018181. Heat_shock_70_CS.
IPR013126. Hsp_70_fam.
[Graphical view]
PfamiPF00012. HSP70. 2 hits.
[Graphical view]
PROSITEiPS00329. HSP70_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. "Structure and expression of the alkA gene of Escherichia coli involved in adaptive response to alkylating agents."
    Nakabeppu Y., Miyata T., Kondo H., Iwanaga S., Sekiguchi M.
    J. Biol. Chem. 259:13730-13736(1984) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-147.
  5. "New genes in old sequence: a strategy for finding genes in the bacterial genome."
    Borodovsky M., Koonin E.V., Rudd K.E.
    Trends Biochem. Sci. 19:309-313(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION.
  6. "Intrinsic and extrinsic approaches for detecting genes in a bacterial genome."
    Borodovsky M., Rudd K.E., Koonin E.V.
    Nucleic Acids Res. 22:4756-4767(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiYEGD_ECOLI
AccessioniPrimary (citable) accession number: P36928
Secondary accession number(s): P76392
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: November 1, 1997
Last modified: January 20, 2016
This is version 114 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.