Reviewed,
UniProtKB/Swiss-Prot P36575 (ARRC_HUMAN)
Last modified
November 3, 2009.
Version 84.
History...
Clusters with 100%,
90%,
50% identity |
Documents (6) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Arrestin-C Alternative name(s): Cone arrestin Short name=C-arrestin Short name=cArr Retinal cone arrestin-3 X-arrestin | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Complete proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 388 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | May play a role in an as yet undefined retina-specific signal transduction. Could binds to photoactivated-phosphorylated red/green opsins. |
| Tissue specificity | Inner and outer segments, and the inner plexiform regions of the retina. |
| Sequence similarities | Belongs to the arrestin family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Sensory transduction Vision |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Technical term | 3D-structure Complete proteome |
| Gene Ontology (GO) | |
| Biological process | response to stimulus Inferred from electronic annotation. Source: UniProtKB-KW signal transduction Ref.1Traceable author statement. Source: ProtInc visual perception Ref.1Traceable author statement. Source: ProtInc |
| Cellular component | cytoplasm Ref.1 Traceable author statement. Source: ProtInc soluble fraction Ref.1Traceable author statement. Source: ProtInc |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| ARRB1 | P49407 | 1 | EBI-718116,EBI-743313 | |
| ZNF496 | Q96IT1 | 1 | EBI-718116,EBI-743906 |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: P36575-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: P36575-2) The sequence of this isoform differs from the canonical sequence as follows: 359-388: SSEDIVIEEFTRKGEEESQKAVEAEGDEGS → R |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 388 | 388 | Arrestin-C | PRO_0000205203 | |||||
Natural variations | |||||||||
| Alternative sequence | 359 – 388 | 30 | SSEDI…GDEGS → R in isoform 2. | VSP_017495 | |||||
| Natural variant | 44 | 1 | L → F: dbSNP rs17855428. Ref.9 | VAR_025520 | |||||
Experimental info | |||||||||
| Sequence conflict | 19 | 1 | G → V in CAG33130. Ref.7 | ||||||
| Sequence conflict | 93 | 1 | P → A Ref.1 | ||||||
| Sequence conflict | 93 | 1 | P → A Ref.3 | ||||||
| Sequence conflict | 93 | 1 | P → A Ref.4 | ||||||
| Sequence conflict | 93 | 1 | P → A Ref.5 | ||||||
| Sequence conflict | 217 | 1 | I → V in AAC78395. Ref.2 | ||||||
| Sequence conflict | 356 – 357 | 2 | EA → AS in CAI41490. Ref.8 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "X-arrestin: a new retinal arrestin mapping to the X chromosome." Murakami A., Yajima T., Sakuma H., McLaren M.J., Inana G. FEBS Lett. 334:203-209(1993) [PubMed: 8224247] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). Tissue: Retina. |
| [2] | "Cone arrestin identified by targeting expression of a functional family." Craft C.M., Whitmore D.H., Wiechmann A.F. J. Biol. Chem. 269:4613-4619(1994) [PubMed: 8308033] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). Tissue: Retina. |
| [3] | Craft C.M. Submitted (NOV-1998) to the EMBL/GenBank/DDBJ databases Cited for: SEQUENCE REVISION. |
| [4] | "Immunolocalization of X-arrestin in human cone photoreceptors." Sakuma H., Inana G., Murakami A., Higashide T., McLaren M.J. FEBS Lett. 382:105-110(1996) [PubMed: 8612728] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). Tissue: Retina. |
| [5] | "Isolation and characterization of the human X-arrestin gene." Sakuma H., Murakami A., Fujimaki T., Inana G. Gene 224:87-95(1998) [PubMed: 9931451] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [6] | "Isolation of cDNA coding for human arrestin 3, retinal (X-arrestin) ARR3." Kaighin V.A., Martin A.L., Aronstam R.S. Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). Tissue: Eye. |
| [7] | "Cloning of human full open reading frames in Gateway(TM) system entry vector (pDONR201)." Ebert L., Schick M., Neubert P., Schatten R., Henze S., Korn B. Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). |
| [8] | "The DNA sequence of the human X chromosome." Ross M.T., Grafham D.V., Coffey A.J., Scherer S., McLay K., Muzny D., Platzer M., Howell G.R., Burrows C., Bird C.P., Frankish A., Lovell F.L., Howe K.L., Ashurst J.L., Fulton R.S., Sudbrak R., Wen G., Jones M.C. Bentley D.R.Nature 434:325-337(2005) [PubMed: 15772651] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [9] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), VARIANT PHE-44. Tissue: Eye. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| U03626 mRNA. Translation: AAC78395.1. AF033105 mRNA. Translation: AAB84302.1. AF076512 AF076511 Genomic DNA. Translation: AAC27524.1. EU883571 mRNA. Translation: ACG60645.1. CR456849 mRNA. Translation: CAG33130.1. AL357752 Genomic DNA. Translation: CAI41490.1. AL357752 Genomic DNA. Translation: CAI41491.1. BC012096 mRNA. Translation: AAH12096.1. | |||||||||||||||||||
| IPI | IPI00003917. IPI00644870. | ||||||||||||||||||
| PIR | S38943. | ||||||||||||||||||
| RefSeq | NP_004303.2. | ||||||||||||||||||
| UniGene | Hs.308 | ||||||||||||||||||
3D structure databases | |||||||||||||||||||
| |||||||||||||||||||
| SMR | P36575. Positions 2-371. | ||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||
| IntAct | P36575. 9 interactions. | ||||||||||||||||||
| STRING | P36575. | ||||||||||||||||||
Proteomic databases | |||||||||||||||||||
| PRIDE | P36575. | ||||||||||||||||||
Genome annotation databases | |||||||||||||||||||
| Ensembl | ENST00000307959; ENSP00000311538; ENSG00000120500; Homo sapiens. [Genome view] ENST00000374480; ENSP00000363604; ENSG00000120500; Homo sapiens. [Genome view] ENST00000374495; ENSP00000363619; ENSG00000120500; Homo sapiens. [Genome view] | ||||||||||||||||||
| GeneID | 407. | ||||||||||||||||||
| KEGG | hsa:407. | ||||||||||||||||||
| NMPDR | fig|9606.3.peg.32946. | ||||||||||||||||||
| UCSC | uc004dya.2. human. uc004dyb.2. human. | ||||||||||||||||||
Organism-specific databases | |||||||||||||||||||
| CTD | 407. | ||||||||||||||||||
| GeneCards | GC0XP069404. | ||||||||||||||||||
| HGNC | HGNC:710. ARR3. | ||||||||||||||||||
| MIM | 301770. gene. | ||||||||||||||||||
| PharmGKB | PA25004. | ||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| HOGENOM | P36575. | ||||||||||||||||||
| HOVERGEN | P36575. | ||||||||||||||||||
| OMA | IVIEEFA. | ||||||||||||||||||
Enzyme and pathway databases | |||||||||||||||||||
| Pathway_Interaction_DB | txa2pathway. Thromboxane A2 receptor signaling. cone_pathway. Visual signal transduction: Cones. | ||||||||||||||||||
Gene expression databases | |||||||||||||||||||
| ArrayExpress | P36575. | ||||||||||||||||||
| Bgee | P36575. | ||||||||||||||||||
| CleanEx | HS_ARR3. | ||||||||||||||||||
| Genevestigator | P36575. | ||||||||||||||||||
| GermOnline | ENSG00000120500. Homo sapiens. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| InterPro | IPR000698. Arrestin. IPR011022. Arrestin-like_C. IPR011021. Arrestin-like_N. IPR014752. Arrestin_C. IPR017864. Arrestin_CS. IPR014753. Arrestin_N. [Graphical view] | ||||||||||||||||||
| Gene3D | G3DSA:2.60.40.640. Arrestin_C. 1 hit. G3DSA:2.60.40.840. Arrestin_N. 1 hit. | ||||||||||||||||||
| PANTHER | PTHR11792. Arrestin. 1 hit. | ||||||||||||||||||
| Pfam | PF02752. Arrestin_C. 1 hit. PF00339. Arrestin_N. 1 hit. [Graphical view] | ||||||||||||||||||
| PRINTS | PR00309. ARRESTIN. | ||||||||||||||||||
| ProDom | PD002099. Arrestin. 2 hits. [Graphical view] [Entries sharing at least one domain] | ||||||||||||||||||
| PROSITE | PS00295. ARRESTINS. 1 hit. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Other Resources | |||||||||||||||||||
| NextBio | 1709. | ||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||
Entry information
| Entry name | ARRC_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P36575 Secondary accession number(s): B5B0B9 Q96EN2 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome X Human chromosome X: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with


