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P36508

- ZNF76_HUMAN

UniProt

P36508 - ZNF76_HUMAN

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Protein

Zinc finger protein 76

Gene
ZNF76, D6S229E, ZNF523
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at transcript leveli

Functioni

May be involved in transcriptional regulation.

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri165 – 18925C2H2-type 1Add
BLAST
Zinc fingeri195 – 21925C2H2-type 2Add
BLAST
Zinc fingeri225 – 24925C2H2-type 3Add
BLAST
Zinc fingeri255 – 27925C2H2-type 4Add
BLAST
Zinc fingeri285 – 30925C2H2-type 5Add
BLAST
Zinc fingeri315 – 33925C2H2-type 6Add
BLAST
Zinc fingeri345 – 36824C2H2-type 7Add
BLAST

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. regulation of transcription from RNA polymerase III promoter Source: ProtInc
  2. regulation of transcription from RNA polymerase II promoter Source: ProtInc
  3. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding, Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger protein 76
Alternative name(s):
Zinc finger protein 523
Gene namesi
Name:ZNF76
Synonyms:D6S229E, ZNF523
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 6

Organism-specific databases

HGNCiHGNC:13149. ZNF76.

Subcellular locationi

Nucleus Reviewed prediction

GO - Cellular componenti

  1. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA37723.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 570570Zinc finger protein 76PRO_0000047386Add
BLAST

Proteomic databases

MaxQBiP36508.
PaxDbiP36508.
PRIDEiP36508.

PTM databases

PhosphoSiteiP36508.

Expressioni

Tissue specificityi

Testis.

Gene expression databases

ArrayExpressiP36508.
BgeeiP36508.
CleanExiHS_ZNF76.
GenevestigatoriP36508.

Organism-specific databases

HPAiHPA030090.
HPA030091.

Interactioni

Protein-protein interaction databases

BioGridi113448. 9 interactions.
IntActiP36508. 1 interaction.
MINTiMINT-1189547.
STRINGi9606.ENSP00000363064.

Structurei

3D structure databases

ProteinModelPortaliP36508.
SMRiP36508. Positions 163-390.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati34 – 45121Add
BLAST
Repeati62 – 73122Add
BLAST
Repeati88 – 99123Add
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni34 – 99663 X 12 AA approximate repeatsAdd
BLAST

Sequence similaritiesi

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri165 – 18925C2H2-type 1Add
BLAST
Zinc fingeri195 – 21925C2H2-type 2Add
BLAST
Zinc fingeri225 – 24925C2H2-type 3Add
BLAST
Zinc fingeri255 – 27925C2H2-type 4Add
BLAST
Zinc fingeri285 – 30925C2H2-type 5Add
BLAST
Zinc fingeri315 – 33925C2H2-type 6Add
BLAST
Zinc fingeri345 – 36824C2H2-type 7Add
BLAST

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

eggNOGiCOG5048.
HOGENOMiHOG000118073.
HOVERGENiHBG053078.
InParanoidiP36508.
OMAiTQDGAQQ.
OrthoDBiEOG7WX080.
PhylomeDBiP36508.
TreeFamiTF333498.

Family and domain databases

Gene3Di3.30.160.60. 7 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF00096. zf-C2H2. 6 hits.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 7 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 7 hits.
PS50157. ZINC_FINGER_C2H2_2. 7 hits.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. Align

Isoform 2 (identifier: P36508-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MESLGLHTVT LSDGTTAYVQ QAVKGEKLLE GQVIQLEDGT TAYIHQVTVQ    50
KEALSFEDGQ PVQLEDGSMA YIHRTPREGY DPSTLEAVQL EDGSTAYIHH 100
PVAVPSESTI LAVQTEVGLE DLAAEDDEGF SADAVVALEQ YASKVLHDSQ 150
IPRNGKGQQV GDRAFRCGYK GCGRLYTTAH HLKVHERAHT GDRPYRCDFP 200
SCGKAFATGY GLKSHVRTHT GEKPYKCPEE LCSKAFKTSG DLQKHVRTHT 250
GERPFQCPFE GCGRSFTTSN IRKVHVRTHT GERPYTCPEP HCGRGFTSAT 300
NYKNHVRIHT GEKPYVCTVP GCGKRFTEYS SLYKHHVVHT HCKPYTCSTC 350
GKTYRQTSTL AMHKRSAHGE LEATEESEQA LYEQQQLEAA SAAEESPPPK 400
RPRIAYLSEV KEERDDIPAQ VAMVTEEDGA PQVALITQDG AQQVSLSPED 450
LQALGSAISM VTQHGSTTLT IPSPDADLAT SGTHTVTMVS ADGTQTQPVT 500
IITSGAVVAE DSSVASLRHQ QVALLATANG THIAVQLEEQ QTLEEAINVA 550
TAAMQQGAVT LETTVSESGC 570
Length:570
Mass (Da):61,831
Last modified:May 2, 2002 - v2
Checksum:i333C99E0E79D86C2
GO
Isoform 1 (identifier: P36508-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     444-498: Missing.

Note: No experimental confirmation available.

Show »
Length:515
Mass (Da):56,324
Checksum:i473D193AE00E7FB1
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti48 – 481T → M.
Corresponds to variant rs2228265 [ dbSNP | Ensembl ].
VAR_033546
Natural varianti272 – 2721R → C.
Corresponds to variant rs33959228 [ dbSNP | Ensembl ].
VAR_033547
Natural varianti403 – 4031R → Q.
Corresponds to variant rs35582935 [ dbSNP | Ensembl ].
VAR_033548

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei444 – 49855Missing in isoform 1. VSP_006894Add
BLAST

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti334 – 3352KH → ND in AAA98739. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M91592 mRNA. Translation: AAA98739.1.
BT007316 mRNA. Translation: AAP35980.1.
BC000133 mRNA. Translation: AAH00133.1.
BC002549 mRNA. Translation: AAH02549.1.
CCDSiCCDS4801.1. [P36508-1]
PIRiA44256.
RefSeqiNP_003418.2. NM_003427.4. [P36508-1]
XP_005249421.1. XM_005249364.1. [P36508-1]
UniGeneiHs.388024.

Genome annotation databases

EnsembliENST00000339411; ENSP00000344097; ENSG00000065029. [P36508-2]
ENST00000373953; ENSP00000363064; ENSG00000065029. [P36508-1]
GeneIDi7629.
KEGGihsa:7629.
UCSCiuc003oki.1. human. [P36508-1]
uc003okj.1. human. [P36508-2]

Polymorphism databases

DMDMi20455531.

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M91592 mRNA. Translation: AAA98739.1 .
BT007316 mRNA. Translation: AAP35980.1 .
BC000133 mRNA. Translation: AAH00133.1 .
BC002549 mRNA. Translation: AAH02549.1 .
CCDSi CCDS4801.1. [P36508-1 ]
PIRi A44256.
RefSeqi NP_003418.2. NM_003427.4. [P36508-1 ]
XP_005249421.1. XM_005249364.1. [P36508-1 ]
UniGenei Hs.388024.

3D structure databases

ProteinModelPortali P36508.
SMRi P36508. Positions 163-390.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 113448. 9 interactions.
IntActi P36508. 1 interaction.
MINTi MINT-1189547.
STRINGi 9606.ENSP00000363064.

PTM databases

PhosphoSitei P36508.

Polymorphism databases

DMDMi 20455531.

Proteomic databases

MaxQBi P36508.
PaxDbi P36508.
PRIDEi P36508.

Protocols and materials databases

DNASUi 7629.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000339411 ; ENSP00000344097 ; ENSG00000065029 . [P36508-2 ]
ENST00000373953 ; ENSP00000363064 ; ENSG00000065029 . [P36508-1 ]
GeneIDi 7629.
KEGGi hsa:7629.
UCSCi uc003oki.1. human. [P36508-1 ]
uc003okj.1. human. [P36508-2 ]

Organism-specific databases

CTDi 7629.
GeneCardsi GC06P036306.
HGNCi HGNC:13149. ZNF76.
HPAi HPA030090.
HPA030091.
MIMi 194549. gene.
neXtProti NX_P36508.
PharmGKBi PA37723.
GenAtlasi Search...

Phylogenomic databases

eggNOGi COG5048.
HOGENOMi HOG000118073.
HOVERGENi HBG053078.
InParanoidi P36508.
OMAi TQDGAQQ.
OrthoDBi EOG7WX080.
PhylomeDBi P36508.
TreeFami TF333498.

Miscellaneous databases

GeneWikii ZNF76.
GenomeRNAii 7629.
NextBioi 29732.
PROi P36508.
SOURCEi Search...

Gene expression databases

ArrayExpressi P36508.
Bgeei P36508.
CleanExi HS_ZNF76.
Genevestigatori P36508.

Family and domain databases

Gene3Di 3.30.160.60. 7 hits.
InterProi IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view ]
Pfami PF00096. zf-C2H2. 6 hits.
[Graphical view ]
SMARTi SM00355. ZnF_C2H2. 7 hits.
[Graphical view ]
PROSITEi PS00028. ZINC_FINGER_C2H2_1. 7 hits.
PS50157. ZINC_FINGER_C2H2_2. 7 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "A testis-expressed Zn finger gene (ZNF76) in human 6p21.3 centromeric to the MHC is closely linked to the human homolog of the T-complex gene tcp-11."
    Ragoussis J., Senger G., Mockridge I., Sanseau P., Ruddy S., Dudley K., Sheer D., Trowsdale J.
    Genomics 14:673-679(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
  2. "Cloning of human full-length CDSs in BD Creator(TM) system donor vector."
    Kalnine N., Chen X., Rolfs A., Halleck A., Hines L., Eisenstein S., Koundinya M., Raphael J., Moreira D., Kelley T., LaBaer J., Lin Y., Phelan M., Farmer A.
    Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
    Tissue: Placenta.

Entry informationi

Entry nameiZNF76_HUMAN
AccessioniPrimary (citable) accession number: P36508
Secondary accession number(s): Q9BQB2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: May 2, 2002
Last modified: September 3, 2014
This is version 137 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 6
    Human chromosome 6: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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