P36303 (COAT_KYMVJ) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names	Recommended name: Coat protein Alternative name(s): Virion protein
Organism	Kennedya yellow mosaic virus (strain Jervis bay) (KYMV)
Taxonomic identifier	36392 [NCBI]
Taxonomic lineage	Viruses › ssRNA positive-strand viruses, no DNA stage › Tymovirales › Tymoviridae › Tymovirus
Virus host	Desmodium [TaxID: 53866] Indigofera australis [TaxID: 53889] Kennedia rubicunda [TaxID: 76709]

Protein attributes

Sequence length	188 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure	The virus coat is composed of 180 copies of the coat protein arranged in a icosahedral shell By similarity.
Subcellular location	Virion Potential.
Sequence similarities	Belongs to the tymoviruses coat protein family.

Ontologies

Keywords
Cellular component	Virion
Molecular function	Capsid protein T=3 icosahedral capsid protein
Gene Ontology (GO)
Cellular component	viral capsid Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural molecule activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 188	188	Coat protein		PRO_0000222929

Sequences

	Sequence		Length	Mass (Da)
	P36303 [UniParc]. Last modified June 1, 1994. Version 1. Checksum: 106FE0D88B46EB7F	FASTA	188	19,601
	10 20 30 40 50 60 MATNHVLASQ LPVNTKSSEI PLQSGTPPPT IIYPFQIEMA SLGTADASDS ISIASNSLLA 70 80 90 100 110 120 SVTTLYRHAK LTSLKATIHP TGQAPAFPTT VALAWVPYNS TATSAQILSV YGGQMFCIGG 130 140 150 160 170 180 SINSLSPIDV PCNLTNVNPI IKDSVTYSDT PKLLLYSIAQ ETAPTLATCS VTITGTLTLH SPLLQATA

References

[1]	"The nucleotide sequence of the genomic RNA of kennedya yellow mosaic tymovirus-Jervis Bay isolate: relationships with potex- and carlaviruses." Ding S., Keese P., Gibbs A. J. Gen. Virol. 71:925-931(1990) [PubMed: 2324710] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	D00637 Genomic RNA. Translation: BAA00533.1.
PIR	JQ0534.
RefSeq	NP_044329.1. NC_001746.1.
3D structure databases
ProteinModelPortal	P36303.
SMR	P36303. Positions 1-188.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1493974.
Family and domain databases
InterPro	IPR000574. Tymo_coat. [Graphical view]
Pfam	PF00983. Tymo_coat. 1 hit. [Graphical view]
ProDom	PD003886. Tymo_coat. 1 hit. [Graphical view] [Entries sharing at least one domain]
ProtoNet	Search...

Entry information

Entry name

COAT_KYMVJ

Accession

Primary (citable) accession number: P36303

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 1, 1994
Last sequence update:	June 1, 1994
Last modified:	May 31, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Viral Protein Annotation Program