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Reviewed, UniProtKB/Swiss-Prot P36303 (COAT_KYMVJ)

Last modified June 16, 2009. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Coat protein
Alternative name(s):
    Virion protein
OrganismKennedya yellow mosaic virus (strain Jervis bay) (KYMV)
Taxonomic identifier36392 [NCBI]
Taxonomic lineageVirusesssRNA positive-strand viruses, no DNA stageTymoviridaeTymovirus
Virus hostDesmodium [TaxID: 53866]
Indigofera australis [TaxID: 53889]
Kennedia rubicunda [TaxID: 76709]

Protein attributes

Sequence length188 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Subunit structure

The virus coat is composed of 180 copies of the coat protein arranged in a icosahedral shell By similarity.

Subcellular location

Virion Potential.

Sequence similarities

Belongs to the tymoviruses coat protein family.

Ontologies

Keywords
   Cellular componentCapsid protein
Virion
Gene Ontology (GO)
   Cellular componentviral capsid

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionstructural molecule activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 188188Coat protein
PRO_0000222929

Sequences

Sequence LengthMass (Da)Tools
P36303-1 [UniParc].

Last modified June 1, 1994. Version 1.
Checksum: 106FE0D88B46EB7F

FASTA18819,601
        10         20         30         40         50         60 
MATNHVLASQ LPVNTKSSEI PLQSGTPPPT IIYPFQIEMA SLGTADASDS ISIASNSLLA 

        70         80         90        100        110        120 
SVTTLYRHAK LTSLKATIHP TGQAPAFPTT VALAWVPYNS TATSAQILSV YGGQMFCIGG 

       130        140        150        160        170        180 
SINSLSPIDV PCNLTNVNPI IKDSVTYSDT PKLLLYSIAQ ETAPTLATCS VTITGTLTLH 


SPLLQATA 

« Hide

References

[1]"The nucleotide sequence of the genomic RNA of kennedya yellow mosaic tymovirus-Jervis Bay isolate: relationships with potex- and carlaviruses."
Ding S., Keese P., Gibbs A.
J. Gen. Virol. 71:925-931(1990) [PubMed: 2324710] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

D00637 Genomic RNA. Translation: BAA00533.1.
PIRJQ0534.
RefSeqNP_044329.1.

3D structure databases

HSSPHSSP built from PDB template 1DDL based on UniProtKB O89511.
ModBaseSearch...

Genome annotation databases

GeneID1493974.

Family and domain databases

InterProIPR000574. Tymo_coat.
[Graphical view]
PfamPF00983. Tymo_coat. 1 hit.
[Graphical view]
ProDomPD003886. Tymo_coat. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetSearch...

Entry information

Entry nameCOAT_KYMVJ
AccessionPrimary (citable) accession number: P36303
Entry history
Integrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: June 1, 1994
Last modified: June 16, 2009
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectVirus (Virus annotation project)

Relevant documents

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents