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P36294

- NCAP_TSWVS

UniProt

P36294 - NCAP_TSWVS

Protein

Nucleoprotein

Gene

N

Organism
Tomato spotted wilt virus (strain SA-05) (TSWV) (Groundnut ringspot virus)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (01 Jun 1994)
      Previous versions | rss
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    Functioni

    Encapsidates the RNA.

    GO - Molecular functioni

    1. RNA binding Source: UniProtKB-KW

    Keywords - Molecular functioni

    Ribonucleoprotein

    Keywords - Ligandi

    RNA-binding, Viral nucleoprotein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Nucleoprotein
    Alternative name(s):
    Nucleocapsid protein
    Short name:
    Protein N
    Gene namesi
    Name:N
    OrganismiTomato spotted wilt virus (strain SA-05) (TSWV) (Groundnut ringspot virus)
    Taxonomic identifieri12675 [NCBI]
    Taxonomic lineageiVirusesssRNA negative-strand virusesBunyaviridaeTospovirus
    Virus hostiFrankliniella occidentalis (Western flower thrips) [TaxID: 133901]
    Scirtothrips dorsalis [TaxID: 163899]
    Solanum lycopersicum (Tomato) (Lycopersicon esculentum) [TaxID: 4081]
    Thrips tabaci [TaxID: 161014]

    Subcellular locationi

    Virion Curated

    GO - Cellular componenti

    1. helical viral capsid Source: UniProtKB-KW
    2. ribonucleoprotein complex Source: UniProtKB-KW
    3. viral nucleocapsid Source: UniProtKB-KW

    Keywords - Cellular componenti

    Capsid protein, Helical capsid protein, Virion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 258258NucleoproteinPRO_0000222005Add
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Family and domain databases

    InterProiIPR002517. Tospo_nucleocap.
    [Graphical view]
    PfamiPF01533. Tospo_nucleocap. 1 hit.
    [Graphical view]
    PIRSFiPIRSF003948. N_TospoV. 1 hit.
    ProDomiPD003056. Tospo_nucleocap. 1 hit.
    [Graphical view] [Entries sharing at least one domain]

    Sequencei

    Sequence statusi: Complete.

    P36294-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSKVKLTKEN IVSLLTQSED VEFEEDQNQV AFNFKTFCQE NLDLIKKMSI    50
    TSCLTFLKNR QSIMKVVKQS DFTFGKVTIK KNSERVEAKD MTFRRLDSMI 100
    RVKLIEETAN NENLAIIKAK IASHPLVQAY GLPLDDAKSV RLAIMLGGSI 150
    PLIASVDSLE MISVVLAIYQ DSQVQELGIE PTKYNTKEAL GKVCTVLKSK 200
    GFTMDDAQDN KGKEYAKILS SCNPNAKGSI AMDYYSDNLE KFYEMFGVKK 250
    EAKIAGVA 258
    Length:258
    Mass (Da):28,852
    Last modified:June 1, 1994 - v1
    Checksum:i0B2B694238755A96
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    S54327 Genomic RNA. Translation: AAB25255.2.
    PIRiJQ1876.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    S54327 Genomic RNA. Translation: AAB25255.2 .
    PIRi JQ1876.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    InterProi IPR002517. Tospo_nucleocap.
    [Graphical view ]
    Pfami PF01533. Tospo_nucleocap. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF003948. N_TospoV. 1 hit.
    ProDomi PD003056. Tospo_nucleocap. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    ProtoNeti Search...

    Publicationsi

    1. "Classification of tospoviruses based on phylogeny of nucleoprotein gene sequences."
      de Avila A.C., de Haan P., Kormelink R., Resende R.O., Goldbach R.W., Peters D.
      J. Gen. Virol. 74:153-159(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

    Entry informationi

    Entry nameiNCAP_TSWVS
    AccessioniPrimary (citable) accession number: P36294
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 1, 1994
    Last sequence update: June 1, 1994
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3