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P36294

- NCAP_TSWVS

UniProt

P36294 - NCAP_TSWVS

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Protein
Nucleoprotein
Gene
N
Organism
Tomato spotted wilt virus (strain SA-05) (TSWV) (Groundnut ringspot virus)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Encapsidates the RNA.

GO - Molecular functioni

  1. RNA binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein

Keywords - Ligandi

RNA-binding, Viral nucleoprotein

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name:
Protein N
Gene namesi
Name:N
OrganismiTomato spotted wilt virus (strain SA-05) (TSWV) (Groundnut ringspot virus)
Taxonomic identifieri12675 [NCBI]
Taxonomic lineageiVirusesssRNA negative-strand virusesBunyaviridaeTospovirus
Virus hostiFrankliniella occidentalis (Western flower thrips) [TaxID: 133901]
Scirtothrips dorsalis [TaxID: 163899]
Solanum lycopersicum (Tomato) (Lycopersicon esculentum) [TaxID: 4081]
Thrips tabaci [TaxID: 161014]

Subcellular locationi

Virion Reviewed prediction

GO - Cellular componenti

  1. helical viral capsid Source: UniProtKB-KW
  2. ribonucleoprotein complex Source: UniProtKB-KW
  3. viral nucleocapsid Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Capsid protein, Helical capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 258258Nucleoprotein
PRO_0000222005Add
BLAST

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR002517. Tospo_nucleocap.
[Graphical view]
PfamiPF01533. Tospo_nucleocap. 1 hit.
[Graphical view]
PIRSFiPIRSF003948. N_TospoV. 1 hit.
ProDomiPD003056. Tospo_nucleocap. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P36294-1 [UniParc]FASTAAdd to Basket

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MSKVKLTKEN IVSLLTQSED VEFEEDQNQV AFNFKTFCQE NLDLIKKMSI    50
TSCLTFLKNR QSIMKVVKQS DFTFGKVTIK KNSERVEAKD MTFRRLDSMI 100
RVKLIEETAN NENLAIIKAK IASHPLVQAY GLPLDDAKSV RLAIMLGGSI 150
PLIASVDSLE MISVVLAIYQ DSQVQELGIE PTKYNTKEAL GKVCTVLKSK 200
GFTMDDAQDN KGKEYAKILS SCNPNAKGSI AMDYYSDNLE KFYEMFGVKK 250
EAKIAGVA 258
Length:258
Mass (Da):28,852
Last modified:June 1, 1994 - v1
Checksum:i0B2B694238755A96
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
S54327 Genomic RNA. Translation: AAB25255.2.
PIRiJQ1876.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
S54327 Genomic RNA. Translation: AAB25255.2 .
PIRi JQ1876.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR002517. Tospo_nucleocap.
[Graphical view ]
Pfami PF01533. Tospo_nucleocap. 1 hit.
[Graphical view ]
PIRSFi PIRSF003948. N_TospoV. 1 hit.
ProDomi PD003056. Tospo_nucleocap. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
ProtoNeti Search...

Publicationsi

  1. "Classification of tospoviruses based on phylogeny of nucleoprotein gene sequences."
    de Avila A.C., de Haan P., Kormelink R., Resende R.O., Goldbach R.W., Peters D.
    J. Gen. Virol. 74:153-159(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNCAP_TSWVS
AccessioniPrimary (citable) accession number: P36294
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: June 1, 1994
Last modified: October 16, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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