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Protein

Nucleoprotein

Gene

N

Organism
Tomato spotted wilt virus (strain SA-05) (TSWV) (Groundnut ringspot virus)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Encapsidates the RNA.

GO - Molecular functioni

Keywordsi

Molecular functionRibonucleoprotein, RNA-binding, Viral nucleoprotein

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name:
Protein N
Gene namesi
Name:N
OrganismiTomato spotted wilt virus (strain SA-05) (TSWV) (Groundnut ringspot virus)
Taxonomic identifieri12675 [NCBI]
Taxonomic lineageiVirusesssRNA virusesssRNA negative-strand virusesBunyaviralesTospoviridaeOrthotospovirus
Virus hostiFrankliniella occidentalis (Western flower thrips) [TaxID: 133901]
Scirtothrips dorsalis [TaxID: 163899]
Solanum lycopersicum (Tomato) (Lycopersicon esculentum) [TaxID: 4081]
Thrips tabaci [TaxID: 161014]

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Capsid protein, Helical capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002220051 – 258NucleoproteinAdd BLAST258

Structurei

3D structure databases

SMRiP36294.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiView protein in InterPro
IPR002517. Tospo_nucleocap.
PfamiView protein in Pfam
PF01533. Tospo_nucleocap. 1 hit.
PIRSFiPIRSF003948. N_TospoV. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD003056. Tospo_nucleocap. 1 hit.

Sequencei

Sequence statusi: Complete.

P36294-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKVKLTKEN IVSLLTQSED VEFEEDQNQV AFNFKTFCQE NLDLIKKMSI
60 70 80 90 100
TSCLTFLKNR QSIMKVVKQS DFTFGKVTIK KNSERVEAKD MTFRRLDSMI
110 120 130 140 150
RVKLIEETAN NENLAIIKAK IASHPLVQAY GLPLDDAKSV RLAIMLGGSI
160 170 180 190 200
PLIASVDSLE MISVVLAIYQ DSQVQELGIE PTKYNTKEAL GKVCTVLKSK
210 220 230 240 250
GFTMDDAQDN KGKEYAKILS SCNPNAKGSI AMDYYSDNLE KFYEMFGVKK

EAKIAGVA
Length:258
Mass (Da):28,852
Last modified:June 1, 1994 - v1
Checksum:i0B2B694238755A96
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
S54327 Genomic RNA. Translation: AAB25255.2.
PIRiJQ1876.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiNCAP_TSWVS
AccessioniPrimary (citable) accession number: P36294
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: June 1, 1994
Last modified: July 5, 2017
This is version 50 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families