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P36293

- NCAP_TSWV3

UniProt

P36293 - NCAP_TSWV3

Protein

Nucleoprotein

Gene

N

Organism
Tomato spotted wilt virus (strain Brazilian Br-03) (TSWV) (Tomato chlorotic spot virus)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (01 Jun 1994)
      Previous versions | rss
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    Functioni

    Encapsidates the RNA.

    GO - Molecular functioni

    1. RNA binding Source: UniProtKB-KW

    Keywords - Molecular functioni

    Ribonucleoprotein

    Keywords - Ligandi

    RNA-binding, Viral nucleoprotein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Nucleoprotein
    Alternative name(s):
    Nucleocapsid protein
    Short name:
    Protein N
    Gene namesi
    Name:N
    OrganismiTomato spotted wilt virus (strain Brazilian Br-03) (TSWV) (Tomato chlorotic spot virus)
    Taxonomic identifieri12851 [NCBI]
    Taxonomic lineageiVirusesssRNA negative-strand virusesBunyaviridaeTospovirus
    Virus hostiFrankliniella occidentalis (Western flower thrips) [TaxID: 133901]
    Scirtothrips dorsalis [TaxID: 163899]
    Solanum lycopersicum (Tomato) (Lycopersicon esculentum) [TaxID: 4081]
    Thrips tabaci [TaxID: 161014]

    Subcellular locationi

    Virion Curated

    GO - Cellular componenti

    1. helical viral capsid Source: UniProtKB-KW
    2. ribonucleoprotein complex Source: UniProtKB-KW
    3. viral nucleocapsid Source: UniProtKB-KW

    Keywords - Cellular componenti

    Capsid protein, Helical capsid protein, Virion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 258258NucleoproteinPRO_0000222002Add
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Family and domain databases

    InterProiIPR002517. Tospo_nucleocap.
    [Graphical view]
    PfamiPF01533. Tospo_nucleocap. 1 hit.
    [Graphical view]
    PIRSFiPIRSF003948. N_TospoV. 1 hit.
    ProDomiPD003056. Tospo_nucleocap. 1 hit.
    [Graphical view] [Entries sharing at least one domain]

    Sequencei

    Sequence statusi: Complete.

    P36293-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSKVKLTREN IISLLTQAGE IEFEEDQIKA TFNFEDFCGE NLDSIKKMSI    50
    TSCLTFLKNR QSIMKVVNLC DFTFGKITIK KNSGRVGAND MTFRRLDSMI 100
    RVKLIEETGK AENLAIIKSK IASHPLVQAY GLPLTDAKSV RLAIMLGGSI 150
    PLIASVDSFE MISIILAIYQ DAKYKDLGIE PSKYNTKEAL GKVCTVLKSK 200
    GFTMDEEQVQ KGKEYATILS SCNPNAKGSI AMEHYSEHLD KFYAMFGVRK 250
    EAKISGVA 258
    Length:258
    Mass (Da):28,677
    Last modified:June 1, 1994 - v1
    Checksum:i2AD901104504556F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    S54325 Genomic RNA. Translation: AAB25256.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    S54325 Genomic RNA. Translation: AAB25256.1 .

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    InterProi IPR002517. Tospo_nucleocap.
    [Graphical view ]
    Pfami PF01533. Tospo_nucleocap. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF003948. N_TospoV. 1 hit.
    ProDomi PD003056. Tospo_nucleocap. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    ProtoNeti Search...

    Publicationsi

    1. "Classification of tospoviruses based on phylogeny of nucleoprotein gene sequences."
      de Avila A.C., de Haan P., Kormelink R., Resende R.O., Goldbach R.W., Peters D.
      J. Gen. Virol. 74:153-159(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

    Entry informationi

    Entry nameiNCAP_TSWV3
    AccessioniPrimary (citable) accession number: P36293
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 1, 1994
    Last sequence update: June 1, 1994
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3