P36293 (NCAP_TSWV3) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Nucleoprotein

Alternative name(s):
Nucleocapsid protein
Short name=Protein N

Gene names

Name:

N

Organism

Tomato spotted wilt virus (strain Brazilian Br-03) (TSWV) (Tomato chlorotic spot virus)

Taxonomic identifier

12851 [NCBI]

Taxonomic lineage

Viruses › ssRNA viruses › ssRNA negative-strand viruses › Bunyaviridae › Tospovirus

Virus host

Frankliniella occidentalis (Western flower thrips) [TaxID: 133901]
Scirtothrips dorsalis [TaxID: 163899]
Solanum lycopersicum (Tomato) (Lycopersicon esculentum) [TaxID: 4081]
Thrips tabaci [TaxID: 161014]

Protein attributes

Sequence length	258 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Encapsidates the RNA.
Subcellular location	Virion Potential.
Sequence similarities	Belongs to the tospovirus nucleocapsid protein family.

Ontologies

Keywords
Cellular component	Virion
Ligand	RNA-binding Viral nucleoprotein
Molecular function	Ribonucleoprotein
Gene Ontology (GO)
Cellular_component	ribonucleoprotein complex Inferred from electronic annotation. Source: UniProtKB-KW viral nucleocapsid Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 258	258	Nucleoprotein		PRO_0000222002

Sequences

	Sequence		Length	Mass (Da)
	P36293 [UniParc]. Last modified June 1, 1994. Version 1. Checksum: 2AD901104504556F	FASTA	258	28,677
	10 20 30 40 50 60 MSKVKLTREN IISLLTQAGE IEFEEDQIKA TFNFEDFCGE NLDSIKKMSI TSCLTFLKNR 70 80 90 100 110 120 QSIMKVVNLC DFTFGKITIK KNSGRVGAND MTFRRLDSMI RVKLIEETGK AENLAIIKSK 130 140 150 160 170 180 IASHPLVQAY GLPLTDAKSV RLAIMLGGSI PLIASVDSFE MISIILAIYQ DAKYKDLGIE 190 200 210 220 230 240 PSKYNTKEAL GKVCTVLKSK GFTMDEEQVQ KGKEYATILS SCNPNAKGSI AMEHYSEHLD 250 KFYAMFGVRK EAKISGVA

References

[1]	"Classification of tospoviruses based on phylogeny of nucleoprotein gene sequences." de Avila A.C., de Haan P., Kormelink R., Resende R.O., Goldbach R.W., Peters D. J. Gen. Virol. 74:153-159(1993) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	S54325 Genomic RNA. Translation: AAB25256.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR002517. Tospo_nucleocap. [Graphical view]
Pfam	PF01533. Tospo_nucleocap. 1 hit. [Graphical view]
PIRSF	PIRSF003948. N_TospoV. 1 hit.
ProDom	PD003056. Tospo_nucleocap. 1 hit. [Graphical view] [Entries sharing at least one domain]
ProtoNet	Search...

Entry information

Entry name

NCAP_TSWV3

Accession

Primary (citable) accession number: P36293

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 1, 1994
Last sequence update:	June 1, 1994
Last modified:	April 3, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Viral Protein Annotation Program