Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

P36288

- VP2_SMSV1

UniProt

P36288 - VP2_SMSV1

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Protein VP2

Gene

ORF3

Organism
San Miguel sea lion virus serotype 1 (SMSV-1) (SMSV serotype 1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Minor structural protein present in one or two copies per virion. Does not seem to play a role in capsid assembly, but is essential for production of infectious virus (By similarity).By similarity

Names & Taxonomyi

Protein namesi
Recommended name:
Protein VP2
Alternative name(s):
Minor capsid protein
Gene namesi
ORF Names:ORF3
OrganismiSan Miguel sea lion virus serotype 1 (SMSV-1) (SMSV serotype 1)
Taxonomic identifieri36406 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageCaliciviridaeVesivirus
Virus hostiOtariidae (fur seals & sea lions) [TaxID: 9702]
ProteomesiUP000007224: Genome

Subcellular locationi

Virion. Host cytoplasm By similarity

GO - Cellular componenti

  1. host cell cytoplasm Source: UniProtKB-KW
  2. virion Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Host cytoplasm, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 110110Protein VP2PRO_0000100126Add
BLAST

Interactioni

Subunit structurei

May interact with capsid protein.By similarity

Family & Domainsi

Sequence similaritiesi

Belongs to the vesivirus VP2 protein family.Curated

Family and domain databases

InterProiIPR007996. Vesivirus_VP2.
[Graphical view]
PfamiPF05332. DUF743. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P36288-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNYANFGLEL FKSIADAAYE GKRVELAGKT LALKNRALDT ERDYNYARLA
60 70 80 90 100
FEKQRFETNA DLRVNGDLYR MQALRAAGYR LNPFSNGHQI YADEAAAANL
110
HSYYGFYKTD
Length:110
Mass (Da):12,589
Last modified:June 1, 1994 - v1
Checksum:i04BB56540F1DB8DB
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M87481 Genomic RNA. Translation: AAA16218.1.
PIRiB48562.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M87481 Genomic RNA. Translation: AAA16218.1 .
PIRi B48562.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR007996. Vesivirus_VP2.
[Graphical view ]
Pfami PF05332. DUF743. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Nucleotide sequence of the capsid protein gene of two serotypes of San Miguel sea lion virus: identification of conserved and non-conserved amino acid sequences among calicivirus capsid proteins."
    Neill J.D.
    Virus Res. 24:211-222(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiVP2_SMSV1
AccessioniPrimary (citable) accession number: P36288
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: June 1, 1994
Last modified: October 29, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Miscellaneous

Translated by a ribosomal terminaition-reinitiation process from the bicistronic mRNA coding for VP1 and VP2.

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3