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Protein

Head decoration protein

Gene

shp

Organism
Enterobacteria phage P21 (Bacteriophage 21) (Bacteriophage P21)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Stabilizes the head shell following the rearrangement of the gp7 subunits of the head shell lattice that accompanies expansion of the head.

Names & Taxonomyi

Protein namesi
Recommended name:
Head decoration protein
Alternative name(s):
Head protein GPshp
Gene namesi
Name:shp
OrganismiEnterobacteria phage P21 (Bacteriophage 21) (Bacteriophage P21)
Taxonomic identifieri10711 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageCaudoviralesSiphoviridaeLambdalikevirus
Virus hostiSalmonella [TaxID: 590]

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Capsid decoration protein, Capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000775981 – 115Head decoration proteinAdd BLAST115

Expressioni

Keywords - Developmental stagei

Late protein

Structurei

Secondary structure

1115
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi16 – 18Combined sources3
Beta strandi24 – 29Combined sources6
Beta strandi40 – 43Combined sources4
Turni45 – 47Combined sources3
Beta strandi50 – 52Combined sources3
Beta strandi55 – 57Combined sources3
Beta strandi63 – 67Combined sources5
Beta strandi74 – 79Combined sources6
Beta strandi81 – 85Combined sources5
Helixi86 – 88Combined sources3
Helixi97 – 101Combined sources5
Turni102 – 106Combined sources5
Beta strandi107 – 112Combined sources6

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1TD0X-ray1.95A/B/C/D2-115[»]
1TD3X-ray2.37A/B/C1-115[»]
1TD4X-ray1.50A1-115[»]
ProteinModelPortaliP36275.
SMRiP36275.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP36275.

Family & Domainsi

Sequence similaritiesi

Belongs to the lambda phage gpD family.Curated

Family and domain databases

Gene3Di2.40.300.10. 1 hit.
InterProiIPR004195. Head_decoration_D.
[Graphical view]
PfamiPF02924. HDPD. 1 hit.
[Graphical view]
ProDomiPD020518. Head_decor_prot. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF51274. SSF51274. 1 hit.

Sequencei

Sequence statusi: Complete.

P36275-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVTKTITEQR AEVRIFAGND PAHTATGSSG ISSPTPALTP LMLDEATGKL
60 70 80 90 100
VVWDGQKAGS AVGILVLPLE GTETALTYYK SGTFATEAIH WPESVDEHKK
110
ANAFAGSALS HAALP
Length:115
Mass (Da):11,977
Last modified:June 1, 1994 - v1
Checksum:i2C5D7F5DA8CC1F99
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M81255 Genomic DNA. Translation: AAA32345.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M81255 Genomic DNA. Translation: AAA32345.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1TD0X-ray1.95A/B/C/D2-115[»]
1TD3X-ray2.37A/B/C1-115[»]
1TD4X-ray1.50A1-115[»]
ProteinModelPortaliP36275.
SMRiP36275.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiP36275.

Family and domain databases

Gene3Di2.40.300.10. 1 hit.
InterProiIPR004195. Head_decoration_D.
[Graphical view]
PfamiPF02924. HDPD. 1 hit.
[Graphical view]
ProDomiPD020518. Head_decor_prot. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF51274. SSF51274. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiDECO_BPP21
AccessioniPrimary (citable) accession number: P36275
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: June 1, 1994
Last modified: November 2, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.