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Protein

Uncharacterized protein YKR078W

Gene

YKR078W

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. phosphatidylinositol-3-phosphate binding Source: SGD
Complete GO annotation...

Enzyme and pathway databases

BioCyciYEAST:G3O-32042-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YKR078W
Gene namesi
Ordered Locus Names:YKR078W
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome XI

Organism-specific databases

CYGDiYKR078w.
SGDiS000001786. YKR078W.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 585585Uncharacterized protein YKR078WPRO_0000203224Add
BLAST

Proteomic databases

MaxQBiP36158.
PaxDbiP36158.

Expressioni

Gene expression databases

GenevestigatoriP36158.

Interactioni

Protein-protein interaction databases

BioGridi34209. 9 interactions.
DIPiDIP-7328N.
MINTiMINT-604524.
STRINGi4932.YKR078W.

Structurei

3D structure databases

ProteinModelPortaliP36158.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG5391.
GeneTreeiENSGT00730000114407.
InParanoidiP36158.
OrthoDBiEOG73JM44.

Family and domain databases

Gene3Di3.30.1520.10. 1 hit.
InterProiIPR001683. Phox.
IPR015404. Vps5_C.
[Graphical view]
PfamiPF00787. PX. 1 hit.
PF09325. Vps5. 1 hit.
[Graphical view]
SMARTiSM00312. PX. 1 hit.
[Graphical view]
SUPFAMiSSF64268. SSF64268. 1 hit.

Sequencei

Sequence statusi: Complete.

P36158-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MENDKASHAS PSIGVNEFVV QGEISIDDSE RSVKSVSVSI SDDEDSKTDV
60 70 80 90 100
QDNMATPSTR SKFQTDLAID NRLLEKDPKY KKLFTEKRRR RRPESCINLM
110 120 130 140 150
TKGKGTGQKD NINDQIFSLR ILPGSDLNSL KDSLWIIKIS TQPDVEKTIA
160 170 180 190 200
RAFSDFYWLY HQLQNNHWGK TIPPPTRSNI LVEKDEFAIN HLFMIRNNEK
210 220 230 240 250
YDPIFNFKPE YIISLQLMAM IKHIFNDKVL RLDSNFIDFI SWDDDLPESL
260 270 280 290 300
QIVVDDSTFT GDKILMTSSQ FRELKEFHKQ SKKVESITNS HASLIPVTEL
310 320 330 340 350
TEIYISPTKL FSRKDYQRLF QPQSTDNTFN NNDPLIQEWI PKSKTLFTSL
360 370 380 390 400
SFGSSAPTYQ EASTEIQACH DWVSISKEQW KQLLYHVLQY IVDEAVKVNS
410 420 430 440 450
VINEFTECLK QISLDEVIRA NSELFLKFSK LNESFLKKFK GASRQDILKL
460 470 480 490 500
IILFDENVRF CESFESILNQ RLKLGKILSI IEVDLDKKKN FLDKLSPGNN
510 520 530 540 550
NSNNEDLKIR TAEDEYRIVL KRYNRVKQSW EKIMEDILNE RKEFEKREAA
560 570 580
EVNSCLKSIR DLNMDEKKHY LQLWQDFVPD EHISQ
Length:585
Mass (Da):68,281
Last modified:June 1, 1994 - v1
Checksum:i45677C7B39E1235E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z28303 Genomic DNA. Translation: CAA82157.1.
BK006944 Genomic DNA. Translation: DAA09228.1.
PIRiS38155.
RefSeqiNP_013004.3. NM_001179868.3.

Genome annotation databases

EnsemblFungiiYKR078W; YKR078W; YKR078W.
GeneIDi853953.
KEGGisce:YKR078W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z28303 Genomic DNA. Translation: CAA82157.1.
BK006944 Genomic DNA. Translation: DAA09228.1.
PIRiS38155.
RefSeqiNP_013004.3. NM_001179868.3.

3D structure databases

ProteinModelPortaliP36158.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi34209. 9 interactions.
DIPiDIP-7328N.
MINTiMINT-604524.
STRINGi4932.YKR078W.

Proteomic databases

MaxQBiP36158.
PaxDbiP36158.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYKR078W; YKR078W; YKR078W.
GeneIDi853953.
KEGGisce:YKR078W.

Organism-specific databases

CYGDiYKR078w.
SGDiS000001786. YKR078W.

Phylogenomic databases

eggNOGiCOG5391.
GeneTreeiENSGT00730000114407.
InParanoidiP36158.
OrthoDBiEOG73JM44.

Enzyme and pathway databases

BioCyciYEAST:G3O-32042-MONOMER.

Miscellaneous databases

NextBioi975362.

Gene expression databases

GenevestigatoriP36158.

Family and domain databases

Gene3Di3.30.1520.10. 1 hit.
InterProiIPR001683. Phox.
IPR015404. Vps5_C.
[Graphical view]
PfamiPF00787. PX. 1 hit.
PF09325. Vps5. 1 hit.
[Graphical view]
SMARTiSM00312. PX. 1 hit.
[Graphical view]
SUPFAMiSSF64268. SSF64268. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete DNA sequence of yeast chromosome XI."
    Dujon B., Alexandraki D., Andre B., Ansorge W., Baladron V., Ballesta J.P.G., Banrevi A., Bolle P.-A., Bolotin-Fukuhara M., Bossier P., Bou G., Boyer J., Buitrago M.J., Cheret G., Colleaux L., Daignan-Fornier B., del Rey F., Dion C.
    , Domdey H., Duesterhoeft A., Duesterhus S., Entian K.-D., Erfle H., Esteban P.F., Feldmann H., Fernandes L., Fobo G.M., Fritz C., Fukuhara H., Gabel C., Gaillon L., Garcia-Cantalejo J.M., Garcia-Ramirez J.J., Gent M.E., Ghazvini M., Goffeau A., Gonzalez A., Grothues D., Guerreiro P., Hegemann J.H., Hewitt N., Hilger F., Hollenberg C.P., Horaitis O., Indge K.J., Jacquier A., James C.M., Jauniaux J.-C., Jimenez A., Keuchel H., Kirchrath L., Kleine K., Koetter P., Legrain P., Liebl S., Louis E.J., Maia e Silva A., Marck C., Monnier A.-L., Moestl D., Mueller S., Obermaier B., Oliver S.G., Pallier C., Pascolo S., Pfeiffer F., Philippsen P., Planta R.J., Pohl F.M., Pohl T.M., Poehlmann R., Portetelle D., Purnelle B., Puzos V., Ramezani Rad M., Rasmussen S.W., Remacha M.A., Revuelta J.L., Richard G.-F., Rieger M., Rodrigues-Pousada C., Rose M., Rupp T., Santos M.A., Schwager C., Sensen C., Skala J., Soares H., Sor F., Stegemann J., Tettelin H., Thierry A., Tzermia M., Urrestarazu L.A., van Dyck L., van Vliet-Reedijk J.C., Valens M., Vandenbol M., Vilela C., Vissers S., von Wettstein D., Voss H., Wiemann S., Xu G., Zimmermann J., Haasemann M., Becker I., Mewes H.-W.
    Nature 369:371-378(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYK58_YEAST
AccessioniPrimary (citable) accession number: P36158
Secondary accession number(s): D6VXD8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: June 1, 1994
Last modified: January 7, 2015
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 1270 molecules/cell in log phase SD medium.1 Publication

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome XI
    Yeast (Saccharomyces cerevisiae) chromosome XI: entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.