Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Putative transcription factor PHD1

Gene

PHD1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Putative transcription factor that functions in pseudohyphal growth.

Miscellaneous

Present with 1420 molecules/cell in log phase SD medium.1 Publication

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi220 – 241H-T-H motifPROSITE-ProRule annotationAdd BLAST22

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • DNA binding transcription factor activity Source: SGD

GO - Biological processi

  • positive regulation of pseudohyphal growth Source: SGD
  • positive regulation of transcription by RNA polymerase II Source: SGD
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciYEAST:G3O-31844-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Putative transcription factor PHD1
Gene namesi
Name:PHD1
Ordered Locus Names:YKL043W
ORF Names:YKL256
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome XI

Organism-specific databases

EuPathDBiFungiDB:YKL043W
SGDiS000001526 PHD1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000583771 – 366Putative transcription factor PHD1Add BLAST366

Proteomic databases

MaxQBiP36093
PaxDbiP36093
PRIDEiP36093

Interactioni

Protein-protein interaction databases

BioGridi34089, 96 interactors
DIPiDIP-4868N
IntActiP36093, 2 interactors
STRINGi4932.YKL043W

Structurei

3D structure databases

ProteinModelPortaliP36093
SMRiP36093
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini186 – 292HTH APSES-typePROSITE-ProRule annotationAdd BLAST107

Sequence similaritiesi

Belongs to the EFG1/PHD1/stuA family.Curated

Phylogenomic databases

GeneTreeiENSGT00530000067611
InParanoidiP36093
OrthoDBiEOG092C2R9Z

Family and domain databases

Gene3Di3.10.260.10, 1 hit
InterProiView protein in InterPro
IPR036887 HTH_APSES_sf
IPR018004 KilA_N/APSES_HTH
IPR003163 Tscrpt_reg_HTH_APSES-type
PfamiView protein in Pfam
PF04383 KilA-N, 1 hit
SMARTiView protein in SMART
SM01252 KilA-N, 1 hit
SUPFAMiSSF54616 SSF54616, 1 hit
PROSITEiView protein in PROSITE
PS51299 HTH_APSES, 1 hit

Sequencei

Sequence statusi: Complete.

P36093-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYHVPEMRLH YPLVNTQSNA AITPTRSYDN TLPSFNELSH QSTINLPFVQ
60 70 80 90 100
RETPNAYANV AQLATSPTQA KSGYYCRYYA VPFPTYPQQP QSPYQQAVLP
110 120 130 140 150
YATIPNSNFQ PSSFPVMAVM PPEVQFDGSF LNTLHPHTEL PPIIQNTNDT
160 170 180 190 200
SVARPNNLKS IAAASPTVTA TTRTPGVSST SVLKPRVITT MWEDENTICY
210 220 230 240 250
QVEANGISVV RRADNNMING TKLLNVTKMT RGRRDGILRS EKVREVVKIG
260 270 280 290 300
SMHLKGVWIP FERAYILAQR EQILDHLYPL FVKDIESIVD ARKPSNKASL
310 320 330 340 350
TPKSSPAPIK QEPSDNKHEI ATEIKPKSID ALSNGASTQG AGELPHLKIN
360
HIDTEAQTSR AKNELS
Length:366
Mass (Da):40,646
Last modified:June 1, 1994 - v1
Checksum:i22B6FA0D505D8654
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U05241 Unassigned DNA Translation: AAA18358.1
X71621 Genomic DNA Translation: CAA50629.1
Z28043 Genomic DNA Translation: CAA81878.1
AY557923 Genomic DNA Translation: AAS56249.1
AY949939 Genomic DNA Translation: AAY27341.1
AY949940 Genomic DNA Translation: AAY27342.1
AY949941 Genomic DNA Translation: AAY27343.1
AY949942 Genomic DNA Translation: AAY27344.1
AY949943 Genomic DNA Translation: AAY27345.1
AY949944 Genomic DNA Translation: AAY27346.1
AY949945 Genomic DNA Translation: AAY27347.1
AY949946 Genomic DNA Translation: AAY27348.1
AY949947 Genomic DNA Translation: AAY27349.1
AY949948 Genomic DNA Translation: AAY27350.1
BK006944 Genomic DNA Translation: DAA09113.1
PIRiS37864
RefSeqiNP_012881.1, NM_001179609.1

Genome annotation databases

EnsemblFungiiYKL043W; YKL043W; YKL043W
GeneIDi853823
KEGGisce:YKL043W

Similar proteinsi

Entry informationi

Entry nameiPHD1_YEAST
AccessioniPrimary (citable) accession number: P36093
Secondary accession number(s): D6VXP3, Q2VQ88
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: June 1, 1994
Last modified: May 23, 2018
This is version 133 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Cookie policy

We would like to use anonymized google analytics cookies to gather statistics on how uniprot.org is used in aggregate. Learn more

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health