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P36026

- UBP11_YEAST

UniProt

P36026 - UBP11_YEAST

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Protein
Ubiquitin carboxyl-terminal hydrolase 11
Gene
UBP11, YKR098C
Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei307 – 3071Nucleophile By similarity
Active sitei649 – 6491Proton acceptor By similarity

GO - Molecular functioni

  1. ubiquitin-specific protease activity Source: SGD

GO - Biological processi

  1. ubiquitin-dependent protein catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protease, Thiol protease

Keywords - Biological processi

Ubl conjugation pathway

Enzyme and pathway databases

BioCyciYEAST:G3O-32060-MONOMER.

Protein family/group databases

MEROPSiC19.102.

Names & Taxonomyi

Protein namesi
Recommended name:
Ubiquitin carboxyl-terminal hydrolase 11 (EC:3.4.19.12)
Alternative name(s):
Deubiquitinating enzyme 11
Ubiquitin thioesterase 11
Ubiquitin-specific-processing protease 11
Gene namesi
Name:UBP11
Ordered Locus Names:YKR098C
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome XI

Organism-specific databases

CYGDiYKR098c.
SGDiS000001806. UBP11.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 717717Ubiquitin carboxyl-terminal hydrolase 11
PRO_0000080596Add
BLAST

Proteomic databases

MaxQBiP36026.

Expressioni

Gene expression databases

GenevestigatoriP36026.

Interactioni

Protein-protein interaction databases

BioGridi34229. 24 interactions.
IntActiP36026. 1 interaction.
MINTiMINT-2785419.
STRINGi4932.YKR098C.

Structurei

3D structure databases

ProteinModelPortaliP36026.
SMRiP36026. Positions 298-707.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini298 – 707410USP
Add
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi557 – 5648Poly-His

Sequence similaritiesi

Belongs to the peptidase C19 family.
Contains 1 USP domain.

Phylogenomic databases

eggNOGiCOG5533.
GeneTreeiENSGT00670000099202.
HOGENOMiHOG000142359.
KOiK11871.
OrthoDBiEOG7R2BSX.

Family and domain databases

InterProiIPR018200. Pept_C19ubi-hydrolase_C_CS.
IPR001394. Peptidase_C19_UCH.
IPR028889. UCH/PAN2.
[Graphical view]
PfamiPF00443. UCH. 1 hit.
[Graphical view]
PROSITEiPS00972. USP_1. 1 hit.
PS00973. USP_2. 1 hit.
PS50235. USP_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P36026-1 [UniParc]FASTAAdd to Basket

« Hide

MLLNPDQILN LVRKVYEVDI KQFYSQLRLK NLRGLLDHAA HLFNVYLRDL    50
EINQEMEALT AFIIGCYYLY LIIPQSLQFQ TRNNLYSSYA KLKNDYQDEH 100
VMGYVLKVVR DESTVIVDRY LAESNGICRT IKRKRAYSLP LRPLPVHMAS 150
LSIHNKFDGS LHEIPNELTK PTNDNSKEDI VRESNQIASS NKLEAGSEVA 200
YYTSKEALSK PSYLKLSTGK DALFKTLSSP ATAPPVHSLE VSSQIRDSSQ 250
DSSSSLSKVE KPKEEEGKIE AIESSAPKAY NLPVIEDSND LLSELSITGL 300
QNPCNTCYIN SIIQCLFGTT LFRDLFLTKK YRLFLNTNKY PKEVQLSRSI 350
YVLFKKMYLN GGRAIIPNRF LKMCKKLRPD LNIPDDQQDT QEFLLIVLAR 400
IHEELSNENV VKYYPDLVSY DANALQVNPS KYEKWYERNV ITDGLSPIDH 450
IYRGQLENIL KCQRCGNSSY SYSTFYVLSL AIPKLSLYSF TSKSRKIKLE 500
DCINLFTGDE ELSGDNAWDC PNCRITDSKS KKEEITSQKK KSTIFGFHSR 550
SRSKSPHHHH HHHHSSDDST KNAKKRNSKK LTTIKSLDFI VLPPILVIHL 600
SRFYYDLTKK NSTVITYPLI LNIILKNGKV IRYKLYGTVN HSGNLINGHY 650
TSVVNKEKSH EIGLNRQVWV TFDDDYIQQH RKDRNNFEAG KTEMSSDEVY 700
VLFYERMDEE NYEEEFC 717
Length:717
Mass (Da):82,703
Last modified:June 1, 1994 - v1
Checksum:i9BAA1EEEB5DD9A65
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z28323 Genomic DNA. Translation: CAA82178.1.
BK006944 Genomic DNA. Translation: DAA09249.1.
PIRiS38177.
RefSeqiNP_013024.1. NM_001179888.1.

Genome annotation databases

EnsemblFungiiYKR098C; YKR098C; YKR098C.
GeneIDi853973.
KEGGisce:YKR098C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z28323 Genomic DNA. Translation: CAA82178.1 .
BK006944 Genomic DNA. Translation: DAA09249.1 .
PIRi S38177.
RefSeqi NP_013024.1. NM_001179888.1.

3D structure databases

ProteinModelPortali P36026.
SMRi P36026. Positions 298-707.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 34229. 24 interactions.
IntActi P36026. 1 interaction.
MINTi MINT-2785419.
STRINGi 4932.YKR098C.

Protein family/group databases

MEROPSi C19.102.

Proteomic databases

MaxQBi P36026.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii YKR098C ; YKR098C ; YKR098C .
GeneIDi 853973.
KEGGi sce:YKR098C.

Organism-specific databases

CYGDi YKR098c.
SGDi S000001806. UBP11.

Phylogenomic databases

eggNOGi COG5533.
GeneTreei ENSGT00670000099202.
HOGENOMi HOG000142359.
KOi K11871.
OrthoDBi EOG7R2BSX.

Enzyme and pathway databases

BioCyci YEAST:G3O-32060-MONOMER.

Miscellaneous databases

NextBioi 975422.

Gene expression databases

Genevestigatori P36026.

Family and domain databases

InterProi IPR018200. Pept_C19ubi-hydrolase_C_CS.
IPR001394. Peptidase_C19_UCH.
IPR028889. UCH/PAN2.
[Graphical view ]
Pfami PF00443. UCH. 1 hit.
[Graphical view ]
PROSITEi PS00972. USP_1. 1 hit.
PS00973. USP_2. 1 hit.
PS50235. USP_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Complete DNA sequence of yeast chromosome XI."
    Dujon B., Alexandraki D., Andre B., Ansorge W., Baladron V., Ballesta J.P.G., Banrevi A., Bolle P.-A., Bolotin-Fukuhara M., Bossier P., Bou G., Boyer J., Buitrago M.J., Cheret G., Colleaux L., Daignan-Fornier B., del Rey F., Dion C.
    , Domdey H., Duesterhoeft A., Duesterhus S., Entian K.-D., Erfle H., Esteban P.F., Feldmann H., Fernandes L., Fobo G.M., Fritz C., Fukuhara H., Gabel C., Gaillon L., Garcia-Cantalejo J.M., Garcia-Ramirez J.J., Gent M.E., Ghazvini M., Goffeau A., Gonzalez A., Grothues D., Guerreiro P., Hegemann J.H., Hewitt N., Hilger F., Hollenberg C.P., Horaitis O., Indge K.J., Jacquier A., James C.M., Jauniaux J.-C., Jimenez A., Keuchel H., Kirchrath L., Kleine K., Koetter P., Legrain P., Liebl S., Louis E.J., Maia e Silva A., Marck C., Monnier A.-L., Moestl D., Mueller S., Obermaier B., Oliver S.G., Pallier C., Pascolo S., Pfeiffer F., Philippsen P., Planta R.J., Pohl F.M., Pohl T.M., Poehlmann R., Portetelle D., Purnelle B., Puzos V., Ramezani Rad M., Rasmussen S.W., Remacha M.A., Revuelta J.L., Richard G.-F., Rieger M., Rodrigues-Pousada C., Rose M., Rupp T., Santos M.A., Schwager C., Sensen C., Skala J., Soares H., Sor F., Stegemann J., Tettelin H., Thierry A., Tzermia M., Urrestarazu L.A., van Dyck L., van Vliet-Reedijk J.C., Valens M., Vandenbol M., Vilela C., Vissers S., von Wettstein D., Voss H., Wiemann S., Xu G., Zimmermann J., Haasemann M., Becker I., Mewes H.-W.
    Nature 369:371-378(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.

Entry informationi

Entry nameiUBP11_YEAST
AccessioniPrimary (citable) accession number: P36026
Secondary accession number(s): D6VXF9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: June 1, 1994
Last modified: May 14, 2014
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Peptidase families
    Classification of peptidase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
  3. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  4. Yeast chromosome XI
    Yeast (Saccharomyces cerevisiae) chromosome XI: entries and gene names

External Data

Dasty 3

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