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Protein

Cell pattern formation-associated protein stuA

Gene

stuA

Organism
Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at transcript leveli

Functioni

Required for the orderly differentiation and spatial organization of cell types of the conidiophore. Affects the spatial localization of abaA and brlA. Expression of stuA is dependent on a functional brlA protein.

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi163 – 18422H-T-H motifPROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. sequence-specific DNA binding transcription factor activity Source: ASPGD

GO - Biological processi

  1. conidiophore development Source: ASPGD
  2. conidium formation Source: ASPGD
  3. positive regulation of conidiophore development Source: ASPGD
  4. positive regulation of conidium formation Source: ASPGD
  5. positive regulation of transcription from RNA polymerase II promoter Source: ASPGD
  6. regulation of transcription from RNA polymerase II promoter Source: ASPGD
  7. sporocarp development involved in asexual reproduction Source: ASPGD
  8. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Cell pattern formation-associated protein stuA
Gene namesi
Name:stuA
ORF Names:AN5836
OrganismiEmericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
Taxonomic identifieri227321 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeEurotialesAspergillaceaeAspergillus
ProteomesiUP000000560: Chromosome I

Subcellular locationi

Nucleus PROSITE-ProRule annotation

GO - Cellular componenti

  1. nucleus Source: ASPGD
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 622622Cell pattern formation-associated protein stuAPRO_0000072296Add
BLAST

Expressioni

Developmental stagei

Expression is increased 50-fold during the establishment of developmental competence.

Interactioni

Protein-protein interaction databases

STRINGi162425.CADANIAP00007206.

Structurei

3D structure databases

ProteinModelPortaliP36011.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini129 – 235107HTH APSES-typePROSITE-ProRule annotationAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi39 – 12991Gln/Pro/Ser-richAdd
BLAST
Compositional biasi253 – 415163Gln/Pro/Ser-richAdd
BLAST

Sequence similaritiesi

Belongs to the EFG1/PHD1/stuA family.Curated
Contains 1 HTH APSES-type DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiNOG41372.
HOGENOMiHOG000213682.
InParanoidiP36011.
KOiK12763.
OMAiYHPTNQT.
OrthoDBiEOG7K9KD5.

Family and domain databases

Gene3Di3.10.260.10. 1 hit.
InterProiIPR029790. EFG1/Phd1/StuA.
IPR018004. KilA_N/APSES_HTH.
IPR003163. Tscrpt_reg_HTH_APSES-type.
[Graphical view]
PANTHERiPTHR11707:SF14. PTHR11707:SF14. 1 hit.
PfamiPF04383. KilA-N. 1 hit.
[Graphical view]
SUPFAMiSSF54616. SSF54616. 1 hit.
PROSITEiPS51299. HTH_APSES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P36011-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MASMNQPQPY MDVHSHLSSG QTYASHPATA GALTHYQYPQ QPPVLQPTST
60 70 80 90 100
YGPASSYSQY PYPNSVASSQ SVPPPTTSIS SQVPAQLLPL PVTNHPVPTH
110 120 130 140 150
GYGNNSGTPM QGYVYDPTGQ MAPPGAKPRV TATLWEDEGS LCYQVEAKGV
160 170 180 190 200
CVARREDNGM INGTKLLNVA GMTRGRRDGI LKSEKVRNVV KIGPMHLKGV
210 220 230 240 250
WIPFDRALEF ANKEKITDLL YPLFVQHISN LLYHPANQNQ RNMTVPDSRR
260 270 280 290 300
LEGPQPVVRT PQAQQPPSLH HHSLQTPVPS HMSQPGGRPS LDRAHTFPTP
310 320 330 340 350
PASASSLIGI TSQNNSYDWN PGMNSSVPNT QPLSIDTSLS NARSMPTTPA
360 370 380 390 400
TTPPGNNLQG MQSYQPQSGY DSKPYYSAAP STHPQYAPQQ PLPQQSMAQY
410 420 430 440 450
GHSMPTSSYR DMAPPSSQRG SVTEIESDVK TERYGQGTVA KTEPEQEQEY
460 470 480 490 500
AQPDSGYNTG RGSYYTTNPS VGGLAHDHSQ LTPDMTGSPQ QNGSGRMTPR
510 520 530 540 550
TSNTAPQWAP GYTTPPRPAA ASSLYNIVSD TRGTSGANGS TSDNYSVASN
560 570 580 590 600
SGYSTGMNGS MGSNKRMRDD DDDRIVPPDS RGEFDTKRRK TLTETPVGGP
610 620
VGGVPLGLQP MKAGGSLISA RR
Length:622
Mass (Da):66,956
Last modified:March 15, 2004 - v2
Checksum:i05D8AE2FAF497083
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M83569 Genomic DNA. Translation: AAA33325.2.
AACD01000100 Genomic DNA. Translation: EAA58345.1.
BN001301 Genomic DNA. Translation: CBF70741.1.
PIRiA44068.
RefSeqiXP_663440.1. XM_658348.1.

Genome annotation databases

EnsemblFungiiCADANIAT00007206; CADANIAP00007206; CADANIAG00007206.
GeneIDi2870743.
KEGGiani:AN5836.2.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M83569 Genomic DNA. Translation: AAA33325.2.
AACD01000100 Genomic DNA. Translation: EAA58345.1.
BN001301 Genomic DNA. Translation: CBF70741.1.
PIRiA44068.
RefSeqiXP_663440.1. XM_658348.1.

3D structure databases

ProteinModelPortaliP36011.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi162425.CADANIAP00007206.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiCADANIAT00007206; CADANIAP00007206; CADANIAG00007206.
GeneIDi2870743.
KEGGiani:AN5836.2.

Phylogenomic databases

eggNOGiNOG41372.
HOGENOMiHOG000213682.
InParanoidiP36011.
KOiK12763.
OMAiYHPTNQT.
OrthoDBiEOG7K9KD5.

Family and domain databases

Gene3Di3.10.260.10. 1 hit.
InterProiIPR029790. EFG1/Phd1/StuA.
IPR018004. KilA_N/APSES_HTH.
IPR003163. Tscrpt_reg_HTH_APSES-type.
[Graphical view]
PANTHERiPTHR11707:SF14. PTHR11707:SF14. 1 hit.
PfamiPF04383. KilA-N. 1 hit.
[Graphical view]
SUPFAMiSSF54616. SSF54616. 1 hit.
PROSITEiPS51299. HTH_APSES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "StuA is required for cell pattern formation in Aspergillus."
    Miller K.Y., Wu J., Miller B.L.
    Genes Dev. 6:1770-1782(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. Miller B.L.
    Submitted (AUG-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: SEQUENCE REVISION.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139.
  4. "The 2008 update of the Aspergillus nidulans genome annotation: a community effort."
    Wortman J.R., Gilsenan J.M., Joardar V., Deegan J., Clutterbuck J., Andersen M.R., Archer D., Bencina M., Braus G., Coutinho P., von Dohren H., Doonan J., Driessen A.J., Durek P., Espeso E., Fekete E., Flipphi M., Estrada C.G.
    , Geysens S., Goldman G., de Groot P.W., Hansen K., Harris S.D., Heinekamp T., Helmstaedt K., Henrissat B., Hofmann G., Homan T., Horio T., Horiuchi H., James S., Jones M., Karaffa L., Karanyi Z., Kato M., Keller N., Kelly D.E., Kiel J.A., Kim J.M., van der Klei I.J., Klis F.M., Kovalchuk A., Krasevec N., Kubicek C.P., Liu B., Maccabe A., Meyer V., Mirabito P., Miskei M., Mos M., Mullins J., Nelson D.R., Nielsen J., Oakley B.R., Osmani S.A., Pakula T., Paszewski A., Paulsen I., Pilsyk S., Pocsi I., Punt P.J., Ram A.F., Ren Q., Robellet X., Robson G., Seiboth B., van Solingen P., Specht T., Sun J., Taheri-Talesh N., Takeshita N., Ussery D., vanKuyk P.A., Visser H., van de Vondervoort P.J., de Vries R.P., Walton J., Xiang X., Xiong Y., Zeng A.P., Brandt B.W., Cornell M.J., van den Hondel C.A., Visser J., Oliver S.G., Turner G.
    Fungal Genet. Biol. 46:S2-13(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139.

Entry informationi

Entry nameiSTUA_EMENI
AccessioniPrimary (citable) accession number: P36011
Secondary accession number(s): C8V024, Q5B0U4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: March 15, 2004
Last modified: January 7, 2015
This is version 81 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.