P35927 (COAT_ELV) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names	Recommended name: Coat protein Alternative name(s): Virion protein
Organism	Erysimum latent virus (ELV)
Taxonomic identifier	12152 [NCBI]
Taxonomic lineage	Viruses › ssRNA positive-strand viruses, no DNA stage › Tymovirales › Tymoviridae › Tymovirus
Virus host	Erysimum [TaxID: 65352]

Protein attributes

Sequence length	202 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure	The virus coat is composed of 180 copies of the coat protein arranged in a icosahedral shell.
Subcellular location	Virion Potential.
Sequence similarities	Belongs to the tymoviruses coat protein family.

Ontologies

Keywords
Cellular component	Virion
Molecular function	Capsid protein T=3 icosahedral capsid protein
Gene Ontology (GO)
Cellular component	viral capsid Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural molecule activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 202	202	Coat protein		PRO_0000222928

Sequences

	Sequence		Length	Mass (Da)
	P35927 [UniParc]. Last modified June 1, 1994. Version 1. Checksum: 4E115B2C5C1A29AC	FASTA	202	21,482
	10 20 30 40 50 60 MTSSRSTELI ETQEDVVRKL SQKTPVSNFS ALPLPNGPQA PTQLQPFQFE FPLPAGQEGS 70 80 90 100 110 120 VTLPLATFPK MATFLSRHRR AQLTQLHAVV SPSAVSIGHP LTVQLIWVPA SSTTTSSQIL 130 140 150 160 170 180 GTYGGQQISV GGQVTNSSPA KVSANLLMMN PHIKDSTSYT DTPKLLVYST PAVPDDKLTT 190 200 SSASIIVFGE VLLSSPQLNP SA

References

[1]	"Comparisons of the genomic sequences of erysimum latent virus and other tymoviruses: a search for the molecular basis of their host specificities." Srifah P., Keese P., Weiller G., Gibbs A. J. Gen. Virol. 73:1437-1447(1992) [PubMed: 1607861] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"The primary structure of the virion protein gene and encoded protein of erysimum latent tymovirus." Srifah P., Keese P., Shukla D., Gibbs A. J. Gen. Virol. 71:3085-3088(1990) [PubMed: 2273397] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
PIR	JQ1556.
RefSeq	NP_047921.1. NC_001977.1.
3D structure databases
ProteinModelPortal	P35927.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1493965.
Family and domain databases
InterPro	IPR000574. Tymo_coat. [Graphical view]
Pfam	PF00983. Tymo_coat. 1 hit. [Graphical view]
ProDom	PD003886. Tymo_coat. 1 hit. [Graphical view] [Entries sharing at least one domain]
ProtoNet	Search...

Entry information

Entry name

COAT_ELV

Accession

Primary (citable) accession number: P35927

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 1, 1994
Last sequence update:	June 1, 1994
Last modified:	September 21, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Viral Protein Annotation Program