P35832 (PTP99_DROME) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 116.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Tyrosine-protein phosphatase 99A EC=3.1.3.48 Alternative name(s): Receptor-linked protein-tyrosine phosphatase 99A Short name=DPTP99A | ||||
| Gene names |
| ||||
| Organism | Drosophila melanogaster (Fruit fly) [Reference proteome] | ||||
| Taxonomic identifier | 7227 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Ecdysozoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora › ![]() |
Protein attributes
| Sequence length | 1301 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Function | May play a key role in signal transduction and growth control. May have a role in the establishment of the intersegmental and segmental nerves. Ref.1 |
| Catalytic activity | Protein tyrosine phosphate + H2O = protein tyrosine + phosphate. |
| Subcellular location | |
| Tissue specificity | Selectively expressed in a subset of axons and pioneer neurons (including aCC and RP2) in the embryo. Ref.1 Ref.2 Ref.3 |
| Developmental stage | Start of expression coincides with the onset of axonogenesis. Ref.1 |
| Sequence similarities | Belongs to the protein-tyrosine phosphatase family. Receptor class subfamily. Contains 3 fibronectin type-III domains. Contains 2 tyrosine-protein phosphatase domains. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Membrane |
| Coding sequence diversity | Alternative splicing |
| Domain | Repeat Signal Transmembrane Transmembrane helix |
| Molecular function | Hydrolase Protein phosphatase |
| PTM | Glycoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | defasciculation of motor neuron axon Inferred from genetic interaction PubMed 8598046. Source: FlyBase motor neuron axon guidanceInferred from genetic interaction PubMed 11178866PubMed 8598046. Source: FlyBase |
| Cellular_component | axon Inferred from direct assay PubMed 18237413. Source: FlyBase integral to membraneInferred from electronic annotation. Source: UniProtKB-KW plasma membraneInferred from direct assay PubMed 20462449. Source: FlyBase |
| Molecular_function | transmembrane receptor protein tyrosine phosphatase activity Inferred from sequence or structural similarity Ref.1. Source: FlyBase |
| Complete GO annotation... | |
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform B (identifier: P35832-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform A (identifier: P35832-2) The sequence of this isoform differs from the canonical sequence as follows: 1050-1119: Missing. | ||||||
| Isoform C (identifier: P35832-3) The sequence of this isoform differs from the canonical sequence as follows: 238-238: R → REFNYVFIWGLFGVKG 1050-1119: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform D (identifier: P35832-4) The sequence of this isoform differs from the canonical sequence as follows: 1050-1058: GNVPQHVIL → AQQRQMLKT 1059-1301: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 28 | 28 | Potential | ||||||
| Chain | 29 – 1301 | 1273 | Tyrosine-protein phosphatase 99A | PRO_0000025429 | |||||
Regions | |||||||||
| Topological domain | 29 – 394 | 366 | Extracellular Potential | ||||||
| Transmembrane | 395 – 415 | 21 | Helical; Potential | ||||||
| Topological domain | 416 – 1301 | 886 | Cytoplasmic Potential | ||||||
| Domain | 66 – 165 | 100 | Fibronectin type-III 1 | ||||||
| Domain | 171 – 265 | 95 | Fibronectin type-III 2 | ||||||
| Domain | 271 – 365 | 95 | Fibronectin type-III 3 | ||||||
| Domain | 476 – 741 | 266 | Tyrosine-protein phosphatase 1 | ||||||
| Domain | 764 – 1016 | 253 | Tyrosine-protein phosphatase 2 | ||||||
| Compositional bias | 34 – 67 | 34 | Ser-rich | ||||||
| Compositional bias | 1054 – 1091 | 38 | Gln-rich | ||||||
| Compositional bias | 1124 – 1128 | 5 | Poly-Ser | ||||||
| Compositional bias | 1228 – 1252 | 25 | Gln-rich | ||||||
Sites | |||||||||
| Active site | 682 | 1 | Phosphocysteine intermediate By similarity | ||||||
Amino acid modifications | |||||||||
| Glycosylation | 33 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 176 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 212 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 278 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 322 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 336 | 1 | N-linked (GlcNAc...) Potential | ||||||
Natural variations | |||||||||
| Alternative sequence | 238 | 1 | R → REFNYVFIWGLFGVKG in isoform C. | VSP_015261 | |||||
| Alternative sequence | 1050 – 1119 | 70 | Missing in isoform A and isoform C. | VSP_005142 | |||||
| Alternative sequence | 1050 – 1058 | 9 | GNVPQHVIL → AQQRQMLKT in isoform D. | VSP_015262 | |||||
| Alternative sequence | 1059 – 1301 | 243 | Missing in isoform D. | VSP_015263 | |||||
Experimental info | |||||||||
| Sequence conflict | 46 | 1 | V → A in AAF56891. Ref.4 | ||||||
| Sequence conflict | 46 | 1 | V → A in AAN14172. Ref.4 | ||||||
| Sequence conflict | 46 | 1 | V → A in AAS65222. Ref.4 | ||||||
| Sequence conflict | 46 | 1 | V → A in AAX53004. Ref.4 | ||||||
| Sequence conflict | 68 | 1 | F → S in AAF56891. Ref.4 | ||||||
| Sequence conflict | 68 | 1 | F → S in AAN14172. Ref.4 | ||||||
| Sequence conflict | 68 | 1 | F → S in AAS65222. Ref.4 | ||||||
| Sequence conflict | 68 | 1 | F → S in AAX53004. Ref.4 | ||||||
| Sequence conflict | 83 | 1 | S → T in AAF56891. Ref.4 | ||||||
| Sequence conflict | 83 | 1 | S → T in AAN14172. Ref.4 | ||||||
| Sequence conflict | 83 | 1 | S → T in AAS65222. Ref.4 | ||||||
| Sequence conflict | 83 | 1 | S → T in AAX53004. Ref.4 | ||||||
| Sequence conflict | 108 | 1 | A → E in AAF56891. Ref.4 | ||||||
| Sequence conflict | 108 | 1 | A → E in AAN14172. Ref.4 | ||||||
| Sequence conflict | 108 | 1 | A → E in AAS65222. Ref.4 | ||||||
| Sequence conflict | 108 | 1 | A → E in AAX53004. Ref.4 | ||||||
| Sequence conflict | 116 | 1 | A → V in AAF56891. Ref.4 | ||||||
| Sequence conflict | 116 | 1 | A → V in AAN14172. Ref.4 | ||||||
| Sequence conflict | 116 | 1 | A → V in AAS65222. Ref.4 | ||||||
| Sequence conflict | 116 | 1 | A → V in AAX53004. Ref.4 | ||||||
| Sequence conflict | 586 | 1 | R → P in AAA28483. Ref.3 | ||||||
| Sequence conflict | 1133 | 1 | T → P in AAF56891. Ref.4 | ||||||
| Sequence conflict | 1133 | 1 | T → P in AAN14172. Ref.4 | ||||||
| Sequence conflict | 1133 | 1 | T → P in AAS65222. Ref.4 | ||||||
| Sequence conflict | 1167 – 1176 | 10 | ASPVTPATAS → GSPAT in AAF56891. Ref.4 | ||||||
| Sequence conflict | 1167 – 1176 | 10 | ASPVTPATAS → GSPAT in AAN14172. Ref.4 | ||||||
| Sequence conflict | 1167 – 1176 | 10 | ASPVTPATAS → GSPAT in AAS65222. Ref.4 | ||||||
| Sequence conflict | 1205 | 1 | N → H Ref.1 | ||||||
| Sequence conflict | 1205 | 1 | N → H Ref.3 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Two Drosophila receptor-like tyrosine phosphatase genes are expressed in a subset of developing axons and pioneer neurons in the embryonic CNS." Yang X., Seow K.T., Bahri S.M., Oon S.H., Chia W. Cell 67:661-673(1991) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS A AND B), FUNCTION, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE. Tissue: Embryo. |
| [2] | "Three receptor-linked protein-tyrosine phosphatases are selectively expressed on central nervous system axons in the Drosophila embryo." Tian S.-S., Tsoulfas P., Zinn K. Cell 67:675-685(1991) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM A), TISSUE SPECIFICITY. Tissue: Embryo. |
| [3] | "Cloning and characterization of a receptor-class phosphotyrosine phosphatase gene expressed on central nervous system axons in Drosophila melanogaster." Hariharan I.K., Chuang P.-T., Rubin G.M. Proc. Natl. Acad. Sci. U.S.A. 88:11266-11270(1991) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM B), TISSUE SPECIFICITY. Tissue: Eye imaginal disk. |
| [4] | "The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. Venter J.C.Science 287:2185-2195(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley. |
| [5] | "Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. Lewis S.E.Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed] [Europe PMC] [Abstract] Cited for: GENOME REANNOTATION, ALTERNATIVE SPLICING. Strain: Berkeley. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | M80464 mRNA. Translation: AAA28486.1. M80539 mRNA. Translation: AAA28485.1. M81795 mRNA. Translation: AAA28483.1. AE014297 Genomic DNA. Translation: AAF56891.3. AE014297 Genomic DNA. Translation: AAN14172.1. AE014297 Genomic DNA. Translation: AAS65222.1. AE014297 Genomic DNA. Translation: AAX53004.1. |
| PIR | A41622. |
| RefSeq | NP_476816.1. NM_057468.3. NP_733288.1. NM_170409.3. NP_996302.1. NM_206579.3. |
| UniGene | Dm.4029. |
3D structure databases | |
| ProteinModelPortal | P35832. |
| SMR | P35832. Positions 127-157, 269-375, 455-1013. |
| ModBase | Search... |
Proteomic databases | |
| PaxDb | P35832. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 43469. |
| KEGG | dme:Dmel_CG11516. |
Organism-specific databases | |
| CTD | 43469. |
| FlyBase | FBgn0004369. Ptp99A. |
Phylogenomic databases | |
| eggNOG | COG5599. |
| HOGENOM | HOG000148805. |
| InParanoid | P35832. |
| KO | K01104. |
| OrthoDB | EOG4R7SRK. |
Gene expression databases | |
| Bgee | P35832. |
| GermOnline | CG2005. Drosophila melanogaster. |
Family and domain databases | |
| Gene3D | 2.60.40.10. 2 hits. |
| InterPro | IPR003961. Fibronectin_type3. IPR013783. Ig-like_fold. IPR000387. Tyr/Dual-sp_Pase. IPR016130. Tyr_Pase_AS. IPR000242. Tyr_Pase_rcpt/non-rcpt. [Graphical view] |
| Pfam | PF00041. fn3. 1 hit. PF00102. Y_phosphatase. 2 hits. [Graphical view] |
| PRINTS | PR00700. PRTYPHPHTASE. |
| SMART | SM00060. FN3. 2 hits. SM00194. PTPc. 2 hits. [Graphical view] |
| SUPFAM | SSF49265. FN_III-like. 2 hits. |
| PROSITE | PS50853. FN3. 2 hits. PS00383. TYR_PHOSPHATASE_1. 1 hit. PS50056. TYR_PHOSPHATASE_2. 1 hit. PS50055. TYR_PHOSPHATASE_PTP. 2 hits. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | Ptp99A. drosophila. |
| GenomeRNAi | 43469. |
| NextBio | 834086. |
Entry information
| Entry name | PTP99_DROME | ||||||||
| Accession | Primary (citable) accession number: P35832 Secondary accession number(s): Q59DT5 Q9VAL3 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Drosophila annotation project | ||||||||
Relevant documents
| Drosophila Drosophila: entries, gene names and cross-references to FlyBase |
| SIMILARITY comments Index of protein domains and families |

Clusters with
