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P35818

- GSPD_PSEAE

UniProt

P35818 - GSPD_PSEAE

Protein

Type II secretion system protein D

Gene

xcpQ

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 102 (01 Oct 2014)
      Sequence version 1 (01 Jun 1994)
      Previous versions | rss
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    Functioni

    Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.By similarity

    GO - Molecular functioni

    1. protein transporter activity Source: InterPro

    GO - Biological processi

    1. protein secretion by the type II secretion system Source: PseudoCAP

    Keywords - Biological processi

    Protein transport, Transport

    Protein family/group databases

    TCDBi1.B.22.1.2. the outer bacterial membrane secretin (secretin) family.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Type II secretion system protein D
    Short name:
    T2SS protein D
    Alternative name(s):
    General secretion pathway protein D
    Gene namesi
    Name:xcpQ
    Ordered Locus Names:PA3105
    OrganismiPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
    Taxonomic identifieri208964 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000002438: Chromosome

    Organism-specific databases

    PseudoCAPiPA3105.

    Subcellular locationi

    GO - Cellular componenti

    1. cell outer membrane Source: UniProtKB-SubCell
    2. type II protein secretion system complex Source: InterPro

    Keywords - Cellular componenti

    Cell outer membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3434Sequence AnalysisAdd
    BLAST
    Chaini35 – 658624Type II secretion system protein DPRO_0000013104Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-60809N.
    STRINGi208964.PA3105.

    Structurei

    Secondary structure

    1
    658
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi42 – 443
    Beta strandi52 – 6110
    Helixi62 – 7312
    Beta strandi77 – 793
    Beta strandi86 – 9611
    Helixi97 – 11014
    Beta strandi113 – 1175
    Beta strandi119 – 1268
    Beta strandi145 – 1506
    Beta strandi152 – 1543
    Helixi156 – 1638
    Helixi164 – 1663
    Beta strandi171 – 1766
    Helixi177 – 1793
    Beta strandi181 – 1866
    Helixi188 – 20215
    Beta strandi209 – 2135
    Beta strandi215 – 2173
    Helixi219 – 23113
    Beta strandi235 – 2373
    Beta strandi242 – 2465
    Helixi247 – 2493
    Beta strandi251 – 2577
    Helixi258 – 27114

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4E9JX-ray2.03A/B35-277[»]
    4EC5X-ray2.20A/B35-277[»]
    ProteinModelPortaliP35818.
    SMRiP35818. Positions 41-273.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GSP D family.Curated

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG1450.
    HOGENOMiHOG000253751.
    KOiK02453.
    OMAiRTINNEV.
    OrthoDBiEOG6423BN.
    PhylomeDBiP35818.

    Family and domain databases

    InterProiIPR001775. GspD/PilQ.
    IPR005644. NolW-like.
    IPR004846. T2SS/T3SS.
    IPR013356. T2SS_GspD.
    IPR004845. T2SS_GspD_CS.
    [Graphical view]
    PfamiPF00263. Secretin. 1 hit.
    PF03958. Secretin_N. 3 hits.
    [Graphical view]
    PRINTSiPR00811. BCTERIALGSPD.
    TIGRFAMsiTIGR02517. type_II_gspD. 1 hit.
    PROSITEiPS00875. T2SP_D. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P35818-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSQPLLRALF APSSRSYVPA VLLSLALGIQ AAHAENSGGN AFVPAGNQQE    50
    AHWTINLKDA DIREFIDQIS EITGETFVVD PRVKGQVSVV SKAQLSLSEV 100
    YQLFLSVMST HGFTVVAQGD QARIVPNAEA KTEAGGGQSA PDRLETRVIQ 150
    VQQSPVSELI PLIRPLVPQY GHLAAVPSAN ALIISDRSAN IARIEDVIRQ 200
    LDQKGSHDYS VINLRYGWVM DAAEVLNNAM SRGQAKGAAG AQVIADARTN 250
    RLIILGPPQA RAKLVQLAQS LDTPTARSAN TRVIRLRHND AKTLAETLGQ 300
    ISEGMKNNGG QGGEQTGGGR PSNILIRADE STNALVLLAD PDTVNALEDI 350
    VRQLDVPRAQ VLVEAAIVEI SGDIQDAVGV QWAINKGGMG GTKTNFANTG 400
    LSIGTLLQSL ESNKAPESIP DGAIVGIGSS SFGALVTALS ANTKSNLLST 450
    PSLLTLDNQK AEILVGQNVP FQTGSYTTNS EGSSNPFTTV ERKDIGVSLK 500
    VTPHINDGAA LRLEIEQEIS ALLPNAQQRN NTDLITSKRS IKSTILAENG 550
    QVIVIGGLIQ DDVSQAESKV PLLGDIPLLG RLFRSTKDTH TKRNLMVFLR 600
    PTVVRDSAGL AALSGKKYSD IRVIDGTRGP EGRPSILPTN ANQLFDGQAV 650
    DLRELMTE 658
    Length:658
    Mass (Da):69,953
    Last modified:June 1, 1994 - v1
    Checksum:iEC2F81FD1A185D50
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X68594 Genomic DNA. Translation: CAA48582.1.
    AE004091 Genomic DNA. Translation: AAG06493.1.
    PIRiS39653.
    RefSeqiNP_251795.1. NC_002516.2.

    Genome annotation databases

    EnsemblBacteriaiAAG06493; AAG06493; PA3105.
    GeneIDi880114.
    KEGGipae:PA3105.
    PATRICi19840783. VBIPseAer58763_3257.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X68594 Genomic DNA. Translation: CAA48582.1 .
    AE004091 Genomic DNA. Translation: AAG06493.1 .
    PIRi S39653.
    RefSeqi NP_251795.1. NC_002516.2.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4E9J X-ray 2.03 A/B 35-277 [» ]
    4EC5 X-ray 2.20 A/B 35-277 [» ]
    ProteinModelPortali P35818.
    SMRi P35818. Positions 41-273.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-60809N.
    STRINGi 208964.PA3105.

    Protein family/group databases

    TCDBi 1.B.22.1.2. the outer bacterial membrane secretin (secretin) family.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAG06493 ; AAG06493 ; PA3105 .
    GeneIDi 880114.
    KEGGi pae:PA3105.
    PATRICi 19840783. VBIPseAer58763_3257.

    Organism-specific databases

    PseudoCAPi PA3105.

    Phylogenomic databases

    eggNOGi COG1450.
    HOGENOMi HOG000253751.
    KOi K02453.
    OMAi RTINNEV.
    OrthoDBi EOG6423BN.
    PhylomeDBi P35818.

    Family and domain databases

    InterProi IPR001775. GspD/PilQ.
    IPR005644. NolW-like.
    IPR004846. T2SS/T3SS.
    IPR013356. T2SS_GspD.
    IPR004845. T2SS_GspD_CS.
    [Graphical view ]
    Pfami PF00263. Secretin. 1 hit.
    PF03958. Secretin_N. 3 hits.
    [Graphical view ]
    PRINTSi PR00811. BCTERIALGSPD.
    TIGRFAMsi TIGR02517. type_II_gspD. 1 hit.
    PROSITEi PS00875. T2SP_D. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Xcp-mediated protein secretion in Pseudomonas aeruginosa: identification of two additional genes and evidence for regulation of xcp gene expression."
      Akrim M., Bally M., Ball G., Tommassen J., Teerink H., Filloux A., Lazdunski A.
      Mol. Microbiol. 10:431-443(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228.

    Entry informationi

    Entry nameiGSPD_PSEAE
    AccessioniPrimary (citable) accession number: P35818
    Secondary accession number(s): Q9HZB2
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 1, 1994
    Last sequence update: June 1, 1994
    Last modified: October 1, 2014
    This is version 102 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3