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P35818

- GSPD_PSEAE

UniProt

P35818 - GSPD_PSEAE

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Protein

Type II secretion system protein D

Gene

xcpQ

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.By similarity

GO - Molecular functioni

  1. protein transporter activity Source: InterPro

GO - Biological processi

  1. protein secretion by the type II secretion system Source: PseudoCAP
Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Protein family/group databases

TCDBi1.B.22.1.2. the outer bacterial membrane secretin (secretin) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Type II secretion system protein D
Short name:
T2SS protein D
Alternative name(s):
General secretion pathway protein D
Gene namesi
Name:xcpQ
Ordered Locus Names:PA3105
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000002438: Chromosome

Organism-specific databases

PseudoCAPiPA3105.

Subcellular locationi

GO - Cellular componenti

  1. cell outer membrane Source: UniProtKB-KW
  2. type II protein secretion system complex Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

Cell outer membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3434Sequence AnalysisAdd
BLAST
Chaini35 – 658624Type II secretion system protein DPRO_0000013104Add
BLAST

Interactioni

Protein-protein interaction databases

DIPiDIP-60809N.
STRINGi208964.PA3105.

Structurei

Secondary structure

1
658
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi42 – 443Combined sources
Beta strandi52 – 6110Combined sources
Helixi62 – 7312Combined sources
Beta strandi77 – 793Combined sources
Beta strandi86 – 9611Combined sources
Helixi97 – 11014Combined sources
Beta strandi113 – 1175Combined sources
Beta strandi119 – 1268Combined sources
Beta strandi145 – 1506Combined sources
Beta strandi152 – 1543Combined sources
Helixi156 – 1638Combined sources
Helixi164 – 1663Combined sources
Beta strandi171 – 1766Combined sources
Helixi177 – 1793Combined sources
Beta strandi181 – 1866Combined sources
Helixi188 – 20215Combined sources
Beta strandi209 – 2135Combined sources
Beta strandi215 – 2173Combined sources
Helixi219 – 23113Combined sources
Beta strandi235 – 2373Combined sources
Beta strandi242 – 2465Combined sources
Helixi247 – 2493Combined sources
Beta strandi251 – 2577Combined sources
Helixi258 – 27114Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4E9JX-ray2.03A/B35-277[»]
4EC5X-ray2.20A/B35-277[»]
ProteinModelPortaliP35818.
SMRiP35818. Positions 41-273.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the GSP D family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG1450.
HOGENOMiHOG000253751.
InParanoidiP35818.
KOiK02453.
OMAiRTINNEV.
OrthoDBiEOG6423BN.
PhylomeDBiP35818.

Family and domain databases

InterProiIPR001775. GspD/PilQ.
IPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR013356. T2SS_GspD.
IPR004845. T2SS_GspD_CS.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 3 hits.
[Graphical view]
PRINTSiPR00811. BCTERIALGSPD.
TIGRFAMsiTIGR02517. type_II_gspD. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P35818-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSQPLLRALF APSSRSYVPA VLLSLALGIQ AAHAENSGGN AFVPAGNQQE
60 70 80 90 100
AHWTINLKDA DIREFIDQIS EITGETFVVD PRVKGQVSVV SKAQLSLSEV
110 120 130 140 150
YQLFLSVMST HGFTVVAQGD QARIVPNAEA KTEAGGGQSA PDRLETRVIQ
160 170 180 190 200
VQQSPVSELI PLIRPLVPQY GHLAAVPSAN ALIISDRSAN IARIEDVIRQ
210 220 230 240 250
LDQKGSHDYS VINLRYGWVM DAAEVLNNAM SRGQAKGAAG AQVIADARTN
260 270 280 290 300
RLIILGPPQA RAKLVQLAQS LDTPTARSAN TRVIRLRHND AKTLAETLGQ
310 320 330 340 350
ISEGMKNNGG QGGEQTGGGR PSNILIRADE STNALVLLAD PDTVNALEDI
360 370 380 390 400
VRQLDVPRAQ VLVEAAIVEI SGDIQDAVGV QWAINKGGMG GTKTNFANTG
410 420 430 440 450
LSIGTLLQSL ESNKAPESIP DGAIVGIGSS SFGALVTALS ANTKSNLLST
460 470 480 490 500
PSLLTLDNQK AEILVGQNVP FQTGSYTTNS EGSSNPFTTV ERKDIGVSLK
510 520 530 540 550
VTPHINDGAA LRLEIEQEIS ALLPNAQQRN NTDLITSKRS IKSTILAENG
560 570 580 590 600
QVIVIGGLIQ DDVSQAESKV PLLGDIPLLG RLFRSTKDTH TKRNLMVFLR
610 620 630 640 650
PTVVRDSAGL AALSGKKYSD IRVIDGTRGP EGRPSILPTN ANQLFDGQAV

DLRELMTE
Length:658
Mass (Da):69,953
Last modified:June 1, 1994 - v1
Checksum:iEC2F81FD1A185D50
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X68594 Genomic DNA. Translation: CAA48582.1.
AE004091 Genomic DNA. Translation: AAG06493.1.
PIRiS39653.
RefSeqiNP_251795.1. NC_002516.2.

Genome annotation databases

EnsemblBacteriaiAAG06493; AAG06493; PA3105.
GeneIDi880114.
KEGGipae:PA3105.
PATRICi19840783. VBIPseAer58763_3257.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X68594 Genomic DNA. Translation: CAA48582.1 .
AE004091 Genomic DNA. Translation: AAG06493.1 .
PIRi S39653.
RefSeqi NP_251795.1. NC_002516.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4E9J X-ray 2.03 A/B 35-277 [» ]
4EC5 X-ray 2.20 A/B 35-277 [» ]
ProteinModelPortali P35818.
SMRi P35818. Positions 41-273.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-60809N.
STRINGi 208964.PA3105.

Protein family/group databases

TCDBi 1.B.22.1.2. the outer bacterial membrane secretin (secretin) family.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAG06493 ; AAG06493 ; PA3105 .
GeneIDi 880114.
KEGGi pae:PA3105.
PATRICi 19840783. VBIPseAer58763_3257.

Organism-specific databases

PseudoCAPi PA3105.

Phylogenomic databases

eggNOGi COG1450.
HOGENOMi HOG000253751.
InParanoidi P35818.
KOi K02453.
OMAi RTINNEV.
OrthoDBi EOG6423BN.
PhylomeDBi P35818.

Family and domain databases

InterProi IPR001775. GspD/PilQ.
IPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR013356. T2SS_GspD.
IPR004845. T2SS_GspD_CS.
[Graphical view ]
Pfami PF00263. Secretin. 1 hit.
PF03958. Secretin_N. 3 hits.
[Graphical view ]
PRINTSi PR00811. BCTERIALGSPD.
TIGRFAMsi TIGR02517. type_II_gspD. 1 hit.
PROSITEi PS00875. T2SP_D. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Xcp-mediated protein secretion in Pseudomonas aeruginosa: identification of two additional genes and evidence for regulation of xcp gene expression."
    Akrim M., Bally M., Ball G., Tommassen J., Teerink H., Filloux A., Lazdunski A.
    Mol. Microbiol. 10:431-443(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228.

Entry informationi

Entry nameiGSPD_PSEAE
AccessioniPrimary (citable) accession number: P35818
Secondary accession number(s): Q9HZB2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: June 1, 1994
Last modified: November 26, 2014
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3