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P35685

- RL7A_ORYSJ

UniProt

P35685 - RL7A_ORYSJ

Protein

60S ribosomal protein L7a

Gene

RPL7A

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 81 (01 Oct 2014)
      Sequence version 1 (01 Jun 1994)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. ribosome biogenesis Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    60S ribosomal protein L7a
    Gene namesi
    Name:RPL7A
    Ordered Locus Names:Os08g0326400, LOC_Os08g23710
    ORF Names:OJ1136_A10.108, P0703C03.43
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 8

    Organism-specific databases

    GrameneiP35685.

    Subcellular locationi

    GO - Cellular componenti

    1. cytosolic large ribosomal subunit Source: EnsemblPlants/Gramene
    2. vacuolar membrane Source: EnsemblPlants/Gramene

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 25825860S ribosomal protein L7aPRO_0000136758Add
    BLAST

    Proteomic databases

    PaxDbiP35685.

    Interactioni

    Protein-protein interaction databases

    STRINGi39946.BGIOSIBCE004801.

    Structurei

    3D structure databases

    ProteinModelPortaliP35685.
    SMRiP35685. Positions 97-215.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L7Ae family.Curated

    Phylogenomic databases

    eggNOGiCOG1358.
    KOiK02936.
    OMAiVENKKAN.

    Family and domain databases

    Gene3Di3.30.1330.30. 1 hit.
    InterProiIPR029064. L30e-like.
    IPR001921. Ribosomal_L7A/L8.
    IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
    IPR018492. Ribosomal_L7Ae/L8/Nhp2.
    IPR004037. Ribosomal_L7Ae_CS.
    [Graphical view]
    PANTHERiPTHR23105:SF1. PTHR23105:SF1. 1 hit.
    PfamiPF01248. Ribosomal_L7Ae. 1 hit.
    [Graphical view]
    PRINTSiPR00881. L7ARS6FAMILY.
    PR00882. RIBOSOMALL7A.
    SUPFAMiSSF55315. SSF55315. 1 hit.
    PROSITEiPS01082. RIBOSOMAL_L7AE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P35685-1 [UniParc]FASTAAdd to Basket

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    MAPKRGGRAP VPAKKKTEKV TNPLFEKRPK QFGIGGALPP KKDLHRFVKW    50
    PKVVRIQRQR RILKQRLKVP PALNQFTRTL DKNLATNLFK MLLKYRPEDK 100
    AAKKERLLKR AQAEAEGKTV EAKKPIVVKY GLNHVTYLIE QSKAQLVVIA 150
    HDVDPIELVV WLPALCRKME VPYCIVKGKA RLGSIVHKKT ASVLCLTTVK 200
    NEDKLEFSKI LEAIKANFND KFDEVRKKWG GGVMGSKSQA KTKAREKLLA 250
    KEAAQRMT 258
    Length:258
    Mass (Da):29,304
    Last modified:June 1, 1994 - v1
    Checksum:iD57511FC45745970
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D12631 mRNA. Translation: BAA02156.1.
    AP003884 Genomic DNA. Translation: BAD01672.1.
    AP004637 Genomic DNA. Translation: BAD03264.1.
    PIRiS38360.
    RefSeqiNP_001061550.1. NM_001068085.1.
    NP_001063618.1. NM_001070153.1.
    UniGeneiOs.60596.

    Genome annotation databases

    EnsemblPlantsiOS08T0326400-01; OS08T0326400-01; OS08G0326400.
    OS09T0507800-01; OS09T0507800-01; OS09G0507800.
    GeneIDi4345279.
    4347522.
    KEGGiosa:4345279.
    osa:4347522.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D12631 mRNA. Translation: BAA02156.1 .
    AP003884 Genomic DNA. Translation: BAD01672.1 .
    AP004637 Genomic DNA. Translation: BAD03264.1 .
    PIRi S38360.
    RefSeqi NP_001061550.1. NM_001068085.1.
    NP_001063618.1. NM_001070153.1.
    UniGenei Os.60596.

    3D structure databases

    ProteinModelPortali P35685.
    SMRi P35685. Positions 97-215.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 39946.BGIOSIBCE004801.

    Proteomic databases

    PaxDbi P35685.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS08T0326400-01 ; OS08T0326400-01 ; OS08G0326400 .
    OS09T0507800-01 ; OS09T0507800-01 ; OS09G0507800 .
    GeneIDi 4345279.
    4347522.
    KEGGi osa:4345279.
    osa:4347522.

    Organism-specific databases

    Gramenei P35685.

    Phylogenomic databases

    eggNOGi COG1358.
    KOi K02936.
    OMAi VENKKAN.

    Family and domain databases

    Gene3Di 3.30.1330.30. 1 hit.
    InterProi IPR029064. L30e-like.
    IPR001921. Ribosomal_L7A/L8.
    IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
    IPR018492. Ribosomal_L7Ae/L8/Nhp2.
    IPR004037. Ribosomal_L7Ae_CS.
    [Graphical view ]
    PANTHERi PTHR23105:SF1. PTHR23105:SF1. 1 hit.
    Pfami PF01248. Ribosomal_L7Ae. 1 hit.
    [Graphical view ]
    PRINTSi PR00881. L7ARS6FAMILY.
    PR00882. RIBOSOMALL7A.
    SUPFAMi SSF55315. SSF55315. 1 hit.
    PROSITEi PS01082. RIBOSOMAL_L7AE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The primary structure of two proteins from the large ribosomal subunit of rice."
      Nishi R., Kidou S., Uchimiya H., Kato A.
      Biochim. Biophys. Acta 1216:110-112(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.

    Entry informationi

    Entry nameiRL7A_ORYSJ
    AccessioniPrimary (citable) accession number: P35685
    Secondary accession number(s): Q8H4Y2
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 1, 1994
    Last sequence update: June 1, 1994
    Last modified: October 1, 2014
    This is version 81 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3