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P35545

- UBIM_MOUSE

UniProt

P35545 - UBIM_MOUSE

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Protein

Ubiquitin-like protein FUBI

Gene
Fau
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. protein binding Source: IntAct
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_196445. SRP-dependent cotranslational protein targeting to membrane.
REACT_198524. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
REACT_198528. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
Ubiquitin-like protein FUBI
Alternative name(s):
Monoclonal non-specific suppressor factor beta
Short name:
MNSF-beta
Gene namesi
Name:Fau
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Unplaced

Organism-specific databases

MGIiMGI:102547. Fau.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7474Ubiquitin-like protein FUBIPRO_0000114883Add
BLAST

Proteomic databases

PRIDEiP35545.

Expressioni

Gene expression databases

BgeeiP35545.
GenevestigatoriP35545.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
Bcl2l14Q9CPT04EBI-309546,EBI-8296066
Sh3gl1Q624193EBI-309546,EBI-642935

Protein-protein interaction databases

BioGridi199600. 2 interactions.
IntActiP35545. 3 interactions.
MINTiMINT-1864660.

Structurei

3D structure databases

ProteinModelPortaliP35545.
SMRiP35545. Positions 1-74.

Family & Domainsi

Sequence similaritiesi

Belongs to the ubiquitin family.

Phylogenomic databases

HOVERGENiHBG000057.
InParanoidiP35545.
KOiK02983.

Family and domain databases

InterProiIPR019956. Ubiquitin.
IPR000626. Ubiquitin-like.
IPR029071. Ubiquitin-rel_dom.
IPR019954. Ubiquitin_CS.
[Graphical view]
PfamiPF00240. ubiquitin. 1 hit.
[Graphical view]
PRINTSiPR00348. UBIQUITIN.
SMARTiSM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.
PROSITEiPS00299. UBIQUITIN_1. 1 hit.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P35545-1 [UniParc]FASTAAdd to Basket

« Hide

MQLFVRAQEL HTLEVTGQET VAQIKDHVAS LEGIAPEDQV VLLAGSPLED   50
EATLGQCGVE ALTTLEVAGR MLGG 74
Length:74
Mass (Da):7,786
Last modified:June 1, 1994 - v1
Checksum:i315D314C260BEB87
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X65922 mRNA. Translation: CAA46715.1. Different termination.
D26610 mRNA. Translation: BAA05655.1. Different termination.
L33715 Genomic DNA. Translation: AAA91564.1. Different termination.
AF147745 mRNA. Translation: AAF80246.1. Different termination.
AK002355 mRNA. Translation: BAB22034.1. Different termination.
AK008466 mRNA. Translation: BAB25684.1. Different termination.
BC058691 mRNA. Translation: AAH58691.1. Different termination.
BC062873 mRNA. Translation: AAH62873.1. Different termination.
PIRiI48346.
RefSeqiNP_001153711.1. NM_001160239.2.
NP_001177365.1. NM_001190436.1.
NP_032016.1. NM_007990.3.
UniGeneiMm.329631.

Genome annotation databases

GeneIDi14109.
KEGGimmu:14109.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X65922 mRNA. Translation: CAA46715.1 . Different termination.
D26610 mRNA. Translation: BAA05655.1 . Different termination.
L33715 Genomic DNA. Translation: AAA91564.1 . Different termination.
AF147745 mRNA. Translation: AAF80246.1 . Different termination.
AK002355 mRNA. Translation: BAB22034.1 . Different termination.
AK008466 mRNA. Translation: BAB25684.1 . Different termination.
BC058691 mRNA. Translation: AAH58691.1 . Different termination.
BC062873 mRNA. Translation: AAH62873.1 . Different termination.
PIRi I48346.
RefSeqi NP_001153711.1. NM_001160239.2.
NP_001177365.1. NM_001190436.1.
NP_032016.1. NM_007990.3.
UniGenei Mm.329631.

3D structure databases

ProteinModelPortali P35545.
SMRi P35545. Positions 1-74.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 199600. 2 interactions.
IntActi P35545. 3 interactions.
MINTi MINT-1864660.

Proteomic databases

PRIDEi P35545.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 14109.
KEGGi mmu:14109.

Organism-specific databases

CTDi 2197.
MGIi MGI:102547. Fau.

Phylogenomic databases

HOVERGENi HBG000057.
InParanoidi P35545.
KOi K02983.

Enzyme and pathway databases

Reactomei REACT_196445. SRP-dependent cotranslational protein targeting to membrane.
REACT_198524. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
REACT_198528. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

ChiTaRSi FAU. mouse.
NextBioi 285156.
SOURCEi Search...

Gene expression databases

Bgeei P35545.
Genevestigatori P35545.

Family and domain databases

InterProi IPR019956. Ubiquitin.
IPR000626. Ubiquitin-like.
IPR029071. Ubiquitin-rel_dom.
IPR019954. Ubiquitin_CS.
[Graphical view ]
Pfami PF00240. ubiquitin. 1 hit.
[Graphical view ]
PRINTSi PR00348. UBIQUITIN.
SMARTi SM00213. UBQ. 1 hit.
[Graphical view ]
SUPFAMi SSF54236. SSF54236. 1 hit.
PROSITEi PS00299. UBIQUITIN_1. 1 hit.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "fau cDNA encodes a ubiquitin-like-S30 fusion protein and is expressed as an antisense sequence in the Finkel-Biskis-Reilly murine sarcoma virus."
    Michiels L., van der Rauwelaert E., van Hasselt F., Kas K., Merregaert J.
    Oncogene 8:2537-2546(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: Swiss.
  2. "Molecular cloning and characterization of a cDNA encoding monoclonal nonspecific suppressor factor."
    Nakamura M., Xavier R.M., Tsunematsu T., Tanigawa Y.
    Proc. Natl. Acad. Sci. U.S.A. 92:3463-3467(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: BALB/c.
  3. "The mouse Fau gene: genomic structure, chromosomal localization, and characterization of two retropseudogenes."
    Casteels D., Poirier C., Guenet J.-L., Merregaert J.
    Genomics 25:291-294(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: BALB/c.
    Tissue: Liver.
  4. "Identification of monoclonal non-specific suppressor factor beta as one of the genes differentially expressed at implantation sites compared to interimplantation sites in the mouse uterus."
    Nie G.-Y., Li Y., Salamonsen L.A., Clements J.A., Findlay J.K.
    Submitted (MAY-1999) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Swiss OB.
  5. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Kidney and Small intestine.
  6. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6.
    Tissue: Brain.

Entry informationi

Entry nameiUBIM_MOUSE
AccessioniPrimary (citable) accession number: P35545
Secondary accession number(s): Q9JJ24
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: June 1, 1994
Last modified: September 3, 2014
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Miscellaneous

This protein is synthesized with ribosomal S30 as its C-terminal extension.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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