P35527 (K1C9_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 29, 2013.
Version 134.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Keratin, type I cytoskeletal 9 Alternative name(s): Cytokeratin-9 Short name=CK-9 Keratin-9 Short name=K9 | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 623 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | May serve an important special function either in the mature palmar and plantar skin tissue or in the morphogenetic program of the formation of these tissues. Plays a role in keratin filament assembly. Ref.1 Ref.8 |
| Subunit structure | Heterotetramer of two type I and two type II keratins. |
| Tissue specificity | Expressed in the terminally differentiated epidermis of palms and soles. Ref.1 |
| Induction | Induced by intrinsic regulatory mechanisms and by extrinsic signals from a subset of dermal palmoplantar fibroblasts. Ref.9 |
| Involvement in disease | Keratoderma, palmoplantar, epidermolytic (EPPK) [MIM:144200]: A dermatological disorder characterized by diffuse thickening of the epidermis on the entire surface of palms and soles sharply bordered with erythematous margins. Some patients may present knuckle pads, thick pads of skin appearing over the proximal phalangeal joints. |
| Miscellaneous | There are two types of cytoskeletal and microfibrillar keratin, I (acidic) and II (neutral to basic) (40-55 and 56-70 kDa, respectively). |
| Sequence similarities | Belongs to the intermediate filament family. |
| Caution | Was originally (Ref.7) thought to be a 60 kDa chain of placental scatter protein. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Intermediate filament Keratin |
| Disease | Disease mutation Palmoplantar keratoderma |
| Domain | Coiled coil |
| Technical term | Complete proteome Direct protein sequencing Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | intermediate filament organization Inferred from mutant phenotype Ref.8. Source: UniProtKB skin developmentInferred from direct assay Ref.1. Source: UniProtKB spermatogenesisInferred from electronic annotation. Source: Compara |
| Cellular_component | intermediate filament Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular_function | structural constituent of cytoskeleton Traceable author statement Ref.5. Source: ProtInc |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 623 | 623 | Keratin, type I cytoskeletal 9 | PRO_0000063640 | |||||
Regions | |||||||||
| Region | 1 – 152 | 152 | Head | ||||||
| Region | 153 – 461 | 309 | Rod | ||||||
| Region | 153 – 188 | 36 | Coil 1A | ||||||
| Region | 189 – 207 | 19 | Linker 1 | ||||||
| Region | 208 – 299 | 92 | Coil 1B | ||||||
| Region | 300 – 322 | 23 | Linker 12 | ||||||
| Region | 323 – 461 | 139 | Coil 2 | ||||||
| Region | 462 – 623 | 162 | Tail | ||||||
| Compositional bias | 15 – 26 | 12 | Poly-Gly | ||||||
Natural variations | |||||||||
| Natural variant | 157 | 1 | M → R in EPPK. Ref.29 | VAR_036805 | |||||
| Natural variant | 157 | 1 | M → T in EPPK. Ref.17 Corresponds to variant rs59510579 [ dbSNP | Ensembl ]. | VAR_010499 | |||||
| Natural variant | 157 | 1 | M → V in EPPK. Ref.12 Ref.17 Ref.21 Corresponds to variant rs58597584 [ dbSNP | Ensembl ]. | VAR_010500 | |||||
| Natural variant | 160 | 1 | L → F in EPPK; with knuckle pads. Ref.23 Corresponds to variant rs28940896 [ dbSNP | Ensembl ]. | VAR_035438 | |||||
| Natural variant | 160 | 1 | L → V in EPPK. Ref.16 | VAR_010501 | |||||
| Natural variant | 161 | 1 | N → H in EPPK. Ref.24 Ref.26 | VAR_036806 | |||||
| Natural variant | 161 | 1 | N → I in EPPK. Ref.20 Ref.22 | VAR_036807 | |||||
| Natural variant | 161 | 1 | N → K in EPPK. Ref.2 Corresponds to variant rs57536312 [ dbSNP | Ensembl ]. | VAR_003822 | |||||
| Natural variant | 161 | 1 | N → S in EPPK. Ref.13 Ref.24 Corresponds to variant rs56707768 [ dbSNP | Ensembl ]. | VAR_010502 | |||||
| Natural variant | 161 | 1 | N → Y in EPPK. Ref.14 Corresponds to variant rs59296273 [ dbSNP | Ensembl ]. | VAR_010503 | |||||
| Natural variant | 163 | 1 | R → P in EPPK. Ref.27 | VAR_036808 | |||||
| Natural variant | 163 | 1 | R → Q in EPPK. Ref.2 Ref.5 Ref.17 Ref.18 Ref.21 Corresponds to variant rs57758262 [ dbSNP | Ensembl ]. | VAR_003823 | |||||
| Natural variant | 163 | 1 | R → W in EPPK. Ref.2 Ref.15 Ref.19 Ref.21 Ref.24 Corresponds to variant rs59616921 [ dbSNP | Ensembl ]. | VAR_003824 | |||||
| Natural variant | 167 | 1 | Y → WL in EPPK. | VAR_036809 | |||||
| Natural variant | 168 | 1 | L → S in EPPK. Ref.15 Corresponds to variant rs61157095 [ dbSNP | Ensembl ]. | VAR_003825 | |||||
| Natural variant | 171 | 1 | V → M in EPPK. Ref.21 Corresponds to variant rs57019720 [ dbSNP | Ensembl ]. | VAR_035439 | |||||
| Natural variant | 172 | 1 | Q → P in EPPK. Ref.12 Corresponds to variant rs59878153 [ dbSNP | Ensembl ]. | VAR_010504 | |||||
| Natural variant | 458 | 1 | L → F in EPPK. Ref.28 Corresponds to variant rs58120120 [ dbSNP | Ensembl ]. | VAR_036810 | |||||
Experimental info | |||||||||
| Mutagenesis | 163 | 1 | R → QHA: Leads to aggregate formation. Ref.8 | ||||||
| Sequence conflict | 12 – 13 | 2 | SR → T in AAC60619. Ref.1 | ||||||
| Sequence conflict | 12 – 13 | 2 | SR → T in CAA52924. Ref.2 | ||||||
| Sequence conflict | 41 | 1 | G → R in AAC60619. Ref.1 | ||||||
| Sequence conflict | 41 | 1 | G → R in CAA82315. Ref.1 | ||||||
| Sequence conflict | 41 | 1 | G → R in CAA52924. Ref.2 | ||||||
| Sequence conflict | 134 | 1 | F → L in AAC60619. Ref.1 | ||||||
| Sequence conflict | 134 | 1 | F → L in CAA82315. Ref.1 | ||||||
| Sequence conflict | 134 | 1 | F → L in CAA52924. Ref.2 | ||||||
| Sequence conflict | 157 – 170 | 14 | MQELN…SYLDK → HLGAGSTPITASQP in AAI21171. Ref.6 | ||||||
Sequences
| ||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "Molecular characterization of the body site-specific human epidermal cytokeratin 9: cDNA cloning, amino acid sequence, and tissue specificity of gene expression." Langbein L., Heid H.W., Moll I., Franke W.W. Differentiation 55:57-72(1993) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], PARTIAL PROTEIN SEQUENCE, FUNCTION, TISSUE SPECIFICITY. Tissue: Foot sole tissue. |
| [2] | "Keratin 9 gene mutations in epidermolytic palmoplantar keratoderma (EPPK)." Reis A., Hennies H.-C., Langbein L., Digweed M., Mischke D., Dreschler M., Schroek E., Royer-Pokora B., Franke W.W., Sperling K., Kuester W. Nat. Genet. 6:174-179(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANTS EPPK LYS-161; GLN-163 AND TRP-163. |
| [3] | "DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage." Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R., Nicholson C., Searle S.M., Wilming L., Young S.K., Abouelleil A., Allen N.R., Bi W., Bloom T., Borowsky M.L., Bugalter B.E., Butler J., Chang J.L. Nusbaum C.Nature 440:1045-1049(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | Bienvenut W.V. Submitted (AUG-2005) to UniProtKB Cited for: PROTEIN SEQUENCE OF 14-29, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [5] | "Keratin 9 point mutation in the pedigree of epidermolytic hereditary palmoplantar keratoderma perturbs keratin intermediate filament network formation." Kobayashi S., Tanaka T., Matsuyoshi N., Imamura S. FEBS Lett. 386:149-155(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 147-372, VARIANT EPPK GLN-163. |
| [6] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 157-623. |
| [7] | "Human placenta contains an epithelial scatter protein." Rosen E.M., Meromsky L., Romero R., Setter E., Goldberg I. Biochem. Biophys. Res. Commun. 168:1082-1088(1990) [PubMed] [Europe PMC] [Abstract] Cited for: PROTEIN SEQUENCE OF 450-466. |
| [8] | "Demonstration of the pathogenic effect of point mutated keratin 9 in vivo." Kobayashi S., Kore-eda S., Tanaka T. FEBS Lett. 447:39-43(1999) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, MUTAGENESIS OF ARG-163. |
| [9] | "Regulation of keratin 9 in nonpalmoplantar keratinocytes by palmoplantar fibroblasts through epithelial-mesenchymal interactions." Yamaguchi Y., Itami S., Tarutani M., Hosokawa K., Miura H., Yoshikawa K. J. Invest. Dermatol. 112:483-488(1999) [PubMed] [Europe PMC] [Abstract] Cited for: INDUCTION. |
| [10] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [11] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [12] | "Keratin 9 gene mutational heterogeneity in patients with epidermolytic palmoplantar keratoderma." Hennies H.-C., Zehender D., Kunze J., Kuester W., Reis A. Hum. Genet. 93:649-654(1994) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS EPPK VAL-157 AND PRO-172. |
| [13] | "Mutations of keratin 9 in two families with palmoplantar epidermolytic hyperkeratosis." Bonifas J.M., Matsumura K., Chen M.A., Berth-Jones J., Hutchinson P.E., Zloczower M., Fritsch P.O., Epstein E.H. Jr. J. Invest. Dermatol. 103:474-477(1994) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT EPPK SER-161. |
| [14] | "Epidermolytic palmoplantar keratoderma cosegregates with a keratin 9 mutation in a pedigree with breast and ovarian cancer." Torchard D., Blanchet-Bardon C., Serova O., Langbein L., Narod S., Janin N., Goguel A.F., Bernheim A., Franke W.W., Lenoir G.M., Feunteun J. Nat. Genet. 6:106-110(1994) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT EPPK TYR-161. |
| [15] | "Mutations in the 1A domain of keratin 9 in patients with epidermolytic palmoplantar keratoderma." Rothnagel J.A., Wojcik S., Liefer K.M., Dominey A.M., Huber M., Hohl D., Roop D.R. J. Invest. Dermatol. 104:430-433(1995) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS EPPK TRP-163 AND SER-168. |
| [16] | "A novel mutation of a leucine residue in coil 1A of keratin 9 in epidermolytic palmoplantar keratoderma." Endo H., Hatamochi A., Shinkai H. J. Invest. Dermatol. 109:113-115(1997) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT EPPK VAL-160. |
| [17] | "Mutations in keratin K9 in kindreds with epidermolytic palmoplantar keratoderma and epidemiology in Northern Ireland." Covello S.P., Irvine A.D., McKenna K.E., Munro C.S., Nevin N.C., Smith F.J.D., Uitto J., McLean W.H.I. J. Invest. Dermatol. 111:1207-1209(1998) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS EPPK THR-157; VAL-157 AND GLN-163. |
| [18] | "Keratin 9 mutations in the coil 1A region in epidermolytic palmoplantar keratoderma." Szalai S., Szalai C., Becker K., Torok E. Pediatr. Dermatol. 16:430-435(1999) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS EPPK GLN-163 AND STOP-170. |
| [19] | "Epidermolytic palmoplantar keratoderma in a Hispanic kindred resulting from a mutation in the keratin 9 gene." Warmuth I., Cserhalmi-Friedman P.B., Schneiderman P., Grossman M.E., Christiano A.M. Clin. Exp. Dermatol. 25:244-246(2000) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT EPPK TRP-163. |
| [20] | "Epidermolytic palmoplantar keratoderma of Vorner: re-evaluation of Vorner's original family and identification of a novel keratin 9 mutation." Kuster W., Reis A., Hennies H.C. Arch. Dermatol. Res. 294:268-272(2002) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT EPPK ILE-161. |
| [21] | "Diagnosis and confirmation of epidermolytic palmoplantar keratoderma by the identification of mutations in keratin 9 using denaturing high-performance liquid chromatography." Rugg E.L., Common J.E., Wilgoss A., Stevens H.P., Buchan J., Leigh I.M., Kelsell D.P. Br. J. Dermatol. 146:952-957(2002) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS EPPK VAL-157; TRP-163; GLN-163 AND MET-171. |
| [22] | "Novel N160I mutation of keratin 9 in a large pedigree from Hungary with epidermolytic palmoplantar keratoderma." Csikos M., Hollo P., Becker K., Racz E., Horvath A., Karpati S. Acta Derm. Venereol. 83:303-305(2003) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT EPPK ILE-161. |
| [23] | "A novel mutation of keratin 9 in epidermolytic palmoplantar keratoderma combined with knuckle pads." Lu Y., Guo C., Liu Q., Zhang X., Cheng L., Li J., Chen B., Gao G., Zhou H., Guo Y., Li Y., Gong Y. Am. J. Med. Genet. A 120:345-349(2003) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT EPPK PHE-160. |
| [24] | "Keratin 9 gene mutations in five Korean families with epidermolytic palmoplantar keratoderma." Lee J.-H., Ahn K.-S., Lee C.-H., Youn S.-J., Kim J.-W., Lee D.-Y., Lee E.-S., Steinert P.M., Yang J.-M. Exp. Dermatol. 12:876-881(2003) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS EPPK HIS-161; SER-161 AND TRP-163. |
| [25] | "A novel mutation of keratin 9 in a large Chinese family with epidermolytic palmoplantar keratoderma." He X.-H., Zhang X.-N., Mao W., Chen H.-P., Xu L.-R., Chen H., He X.-L., Le Y.-P. Br. J. Dermatol. 150:647-651(2004) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT EPPK TYR-167 DEL TRP-LEU INS. |
| [26] | "A novel keratin 9 gene mutation (Asn160His) in a Taiwanese family with epidermolytic palmoplantar keratoderma." Lin J.-H., Lin M.-H., Yang M.-H., Chao S.-C. Clin. Exp. Dermatol. 29:308-310(2004) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT EPPK HIS-161. |
| [27] | "A novel mutation of keratin 9 gene (R162P) in a Japanese family with epidermolytic palmoplantar keratoderma." Kon A., Itagaki K., Yoneda K., Takagaki K. Arch. Dermatol. Res. 296:375-378(2005) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT EPPK PRO-163. |
| [28] | "L457F missense mutation within the 2B rod domain of keratin 9 in a Japanese family with epidermolytic palmoplantar keratoderma." Kon A., Ito N., Kudo Y., Nomura K., Yoneda K., Hanada K., Hashimoto I., Takagaki K. Br. J. Dermatol. 155:624-626(2006) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT EPPK PHE-458. |
| [29] | "A novel keratin 9 gene mutation (Met156Arg) in a Japanese patient with epidermolytic palmoplantar keratoderma." Shimazu K., Tsunemi Y., Hattori N., Saeki H., Komine M., Adachi M., Tamaki K. Int. J. Dermatol. 45:1128-1130(2006) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT EPPK ARG-157. |
| + | Additional computationally mapped references. |
Web resources
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | Z29074 mRNA. Translation: CAA82315.1. S69510 mRNA. Translation: AAC60619.1. X75015 Genomic DNA. Translation: CAA52924.1. AC019349 Genomic DNA. No translation available. AB001594 mRNA. Translation: BAA19418.1. BC121170 mRNA. Translation: AAI21171.1. |
| IPI | IPI00019359. |
| PIR | I37984. |
| RefSeq | NP_000217.2. NM_000226.3. |
| UniGene | Hs.654569. |
3D structure databases | |
| ProteinModelPortal | P35527. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | P35527. 17 interactions. |
| MINT | MINT-4998976. |
| STRING | 9606.ENSP00000246662. |
PTM databases | |
| PhosphoSite | P35527. |
Polymorphism databases | |
| DMDM | 239938886. |
2D gel databases | |
| DOSAC-COBS-2DPAGE | P35527. |
Proteomic databases | |
| PaxDb | P35527. |
| PeptideAtlas | P35527. |
| PRIDE | P35527. |
| ProMEX | P35527. |
Protocols and materials databases | |
| DNASU | 3857. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000246662; ENSP00000246662; ENSG00000171403. |
| GeneID | 3857. |
| KEGG | hsa:3857. |
| UCSC | uc002hxe.4. human. |
Organism-specific databases | |
| CTD | 3857. |
| GeneCards | GC17M039722. |
| H-InvDB | HIX0039018. |
| HGNC | HGNC:6447. KRT9. |
| HPA | HPA007261. HPA009673. |
| MIM | 144200. phenotype. 149100. phenotype. 607606. gene. |
| neXtProt | NX_P35527. |
| Orphanet | 2199. Epidermolytic palmoplantar keratoderma. |
| PharmGKB | PA30235. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG148410. |
| HOGENOM | HOG000230975. |
| HOVERGEN | HBG013015. |
| InParanoid | P35527. |
| KO | K07604. |
| OMA | MALKKNH. |
| OrthoDB | EOG4BCDNC. |
| PhylomeDB | P35527. |
Gene expression databases | |
| Bgee | P35527. |
| CleanEx | HS_KRT9. |
| Genevestigator | P35527. |
| GermOnline | ENSG00000171403. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR016044. F. IPR001664. IF. IPR018039. Intermediate_filament_CS. IPR002957. Keratin_I. [Graphical view] |
| PANTHER | PTHR23239. PTHR23239. 1 hit. |
| Pfam | PF00038. Filament. 1 hit. [Graphical view] |
| PRINTS | PR01248. TYPE1KERATIN. |
| PROSITE | PS00226. IF. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 3857. |
| NextBio | 15177. |
| SOURCE | Search... |
Entry information
| Entry name | K1C9_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P35527 Secondary accession number(s): O00109, Q0IJ47, Q14665 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 17 Human chromosome 17: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
