Reviewed,
UniProtKB/Swiss-Prot P35520 (CBS_HUMAN)
Last modified
November 3, 2009.
Version 122.
History...
Clusters with 100%,
90%,
50% identity |
Documents (7) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Cystathionine beta-synthase EC=4.2.1.22 Alternative name(s): Serine sulfhydrase Beta-thionase | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Complete proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 551 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Catalytic activity | L-serine + L-homocysteine = L-cystathionine + H2O. |
| Cofactor | Pyridoxal phosphate. |
| Enzyme regulation | Allosterically activated by adenosyl-methionine (AdoMet). |
| Pathway | |
| Subunit structure | Homotetramer. Ref.13 |
| Subcellular location | |
| Tissue specificity | In the adult strongly expressed in liver and pancreas, some expression in heart and brain, weak expression in lung and kidney. In the fetus, expressed in brain, liver and kidney. |
| Involvement in disease | Defects in CBS are the cause of cystathionine beta-synthase deficiency (CBSD) [MIM:236200]. It is a recessively inherited error of sulfur amino acid metabolism leading to homocystinuria. Homocystinuria is associated with elevated levels of homocysteine in the blood (homocysteinemia) [MIM:603174]. Patients with homocystinuria have also methionine in their body fluid and usually benefit from dietary and pharmacological treatment (high doses of pyridoxine and vitamin B6). Other characteristics are dislocated optic lenses, vascular disorders (arteriosclerosis and thrombosis), skeletal abnormalities, and mental retardation. Ref.16 Ref.17 Ref.18 Ref.19 Ref.20 Ref.21 Ref.22 Ref.23 Ref.24 Ref.25 Ref.26 Ref.27 Ref.28 Ref.29 Ref.30 Ref.31 Ref.32 Ref.33 Ref.34 Ref.35 Ref.36 Ref.37 Ref.38 Ref.39 Ref.40 Ref.41 Ref.42 Ref.43 Ref.44 Ref.45 Ref.46 Ref.47 Ref.48 |
| Sequence similarities | Belongs to the cysteine synthase/cystathionine beta-synthase family. Contains 1 CBS domain. |
Ontologies
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: P35520-1) Also known as: Major; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: P35520-2) Also known as: Minor; The sequence of this isoform differs from the canonical sequence as follows: 518-518: Y → SQDQAWAGVVGGPAD |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecule processing | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Initiator methionine | 1 | 1 | Removed By similarity | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Chain | 2 – 551 | 550 | Cystathionine beta-synthase | PRO_0000167133 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Regions | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Domain | 418 – 476 | 59 | CBS | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Region | 256 – 260 | 5 | Pyridoxal phosphate binding | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sites | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Metal binding | 52 | 1 | Iron (heme axial ligand) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Metal binding | 65 | 1 | Iron (heme axial ligand) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding site | 149 | 1 | Pyridoxal phosphate | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding site | 349 | 1 | Pyridoxal phosphate | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Amino acid modifications | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 119 | 1 | N6-(pyridoxal phosphate)lysine | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Cross-link | 211 | Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO) Ref.11 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Natural variations | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 518 | 1 | Y → SQDQAWAGVVGGPAD in isoform 2. | VSP_001217 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 18 | 1 | R → C Associated with 1/3 to 2/3 the enzyme activity of the wild-type. Ref.47 | VAR_046921 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 49 | 1 | P → L in CBSD. Ref.41 | VAR_008049 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 58 | 1 | R → W in CBSD; 18% of activity; linked with Val-113. Ref.36 | VAR_008050 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 65 | 1 | H → R in CBSD. Ref.38 | VAR_021790 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 69 | 1 | A → P: dbSNP rs17849313. Ref.9 | VAR_046922 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 78 | 1 | P → R in CBSD; 50% of activity; severe form. Ref.19 | VAR_002171 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 85 | 1 | G → R in CBSD; loss of activity. Ref.40 | VAR_008051 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 88 | 1 | P → S in CBSD. Ref.23 | VAR_002172 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 101 | 1 | L → P in CBSD; common mutation in Irish population; loss of activity. Ref.35 Ref.41 Ref.43 | VAR_021791 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 102 | 1 | K → N in CBSD; 50% of activity. Ref.19 | VAR_002173 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 102 | 1 | K → Q in CBSD; severe form; linked with Arg-77. dbSNP rs34040148. Ref.37 | VAR_008052 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 109 | 1 | C → R in CBSD; loss of activity. Ref.41 | VAR_021792 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 114 | 1 | A → V in CBSD; mild form; when linked with W-58 severe form; partial loss of activity; affects tetramer formation by promoting formation of larger aggregates. Ref.17 Ref.38 | VAR_002174 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 116 | 1 | G → R in CBSD. Ref.28 | VAR_008053 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 121 | 1 | R → C in CBSD. | VAR_008054 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 121 | 1 | R → H in CBSD. | VAR_008055 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 121 | 1 | R → L in CBSD; mild form. | VAR_008056 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 125 | 1 | R → P in CBSD. Ref.39 | VAR_046923 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 125 | 1 | R → Q in CBSD; severe form; loss of activity; when linked with D-132 moderate form. Ref.20 Ref.23 Ref.41 | VAR_002175 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 125 | 1 | R → W in CBSD; exhibits an activity lower than 4% of the wild-type enzyme; absent capacity to form multimeric quaternary structure. Ref.42 Ref.48 | VAR_008057 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 126 | 1 | M → V in CBSD; loss of activity. Ref.36 | VAR_008058 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 128 | 1 | E → D in CBSD. | VAR_008059 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 131 | 1 | E → D in CBSD; loss of activity; linked with Q-125. Ref.20 | VAR_002176 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 139 | 1 | G → R in CBSD; mild form. Ref.22 | VAR_008060 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 143 | 1 | I → M in CBSD; 4% of activity; stable. Ref.44 | VAR_021793 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 144 | 1 | E → K in CBSD; loss of activity. Ref.22 Ref.29 Ref.34 Ref.38 Ref.41 | VAR_002177 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 145 | 1 | P → L in CBSD; linked with Q-438. Ref.17 | VAR_002178 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 148 | 1 | G → R in CBSD; loss of activity; absent capacity to form multimeric quaternary structure. Ref.44 Ref.48 | VAR_008061 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 151 – 159 | 9 | Missing in CBSD. | VAR_008063 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 151 | 1 | G → R in CBSD. | VAR_008062 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 152 | 1 | I → M in CBSD; severe form. | VAR_008064 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 154 | 1 | L → Q in CBSD; protein expression is comparable to wild-type; significant decrease of enzyme activity. Ref.47 | VAR_046924 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 155 | 1 | A → T in CBSD; complete loss of activity; severely affects tetramer formation by promoting formation of larger aggregates. Ref.38 | VAR_008065 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 155 | 1 | A → V in CBSD; protein expression is comparable to wild-type; significant decrease of enzyme activity. Ref.47 | VAR_046925 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 165 | 1 | C → Y in CBSD; severe form; protein expression is comparable to wild-type; significant decrease of enzyme activity. Ref.24 Ref.34 Ref.38 Ref.41 | VAR_002179 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 168 | 1 | V → A in CBSD. Ref.46 | VAR_046926 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 168 | 1 | V → M in CBSD. Ref.25 | VAR_002180 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 173 | 1 | M → V in CBSD; presents 40% of the wild-type activity; dramatically reduced capacity to form multimeric quaternary structure. Ref.48 | VAR_046927 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 176 | 1 | E → K in CBSD; severe form; loss of activity; severely affects tetramer formation by promoting formation of larger aggregates. Ref.32 Ref.38 | VAR_008066 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 180 | 1 | V → A in CBSD. | VAR_008067 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 191 | 1 | T → M in CBSD; moderate and severe forms; exhibits an activity lower than 4% of the wild-type enzyme; absent capacity to form multimeric quaternary structure. Ref.42 Ref.46 Ref.48 | VAR_008068 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 198 | 1 | D → V in CBSD. | VAR_008069 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 224 | 1 | R → H in CBSD. Ref.25 | VAR_002181 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 226 | 1 | A → T in CBSD; presents 20% of the wild-type activity; dramatically reduced capacity to form multimeric quaternary structure. Ref.43 Ref.48 | VAR_008070 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 228 | 1 | N → K in CBSD; loss of activity. Ref.35 Ref.41 Ref.44 | VAR_021794 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 228 | 1 | N → S in CBSD; has significantly decreased levels of enzyme activity. Ref.43 | VAR_046928 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 231 | 1 | A → P in CBSD; has significantly decreased levels of enzyme activity. Ref.43 | VAR_046929 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 234 | 1 | D → N in CBSD. | VAR_008071 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 234 | 1 | Missing in CBSD; protein expression is comparable to wild-type; significant decrease of enzyme activity. | VAR_046930 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 239 | 1 | E → K in CBSD. | VAR_002182 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 247 – 256 | 10 | Missing in CBSD. | VAR_046931 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 257 | 1 | T → M in CBSD; moderate to severe form; protein expression is comparable to wild-type; significant decrease of enzyme activity. Ref.23 Ref.47 | VAR_002183 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 262 | 1 | T → M in CBSD; moderate form. Ref.30 Ref.35 | VAR_008072 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 262 | 1 | T → R in CBSD; severe form. Ref.37 | VAR_021795 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 266 | 1 | R → G in CBSD. | VAR_008073 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 266 | 1 | R → K in CBSD; mild form. Ref.30 | VAR_008074 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 270 | 1 | Missing in CBSD. | VAR_008075 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 275 | 1 | C → Y in CBSD; severe form; exhibits an activity lower than 4% of the wild-type enzyme; absent capacity to form multimeric quaternary structure. Ref.42 Ref.48 | VAR_021796 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 278 | 1 | I → T in CBSD; mild to severe form; common mutation; loss of activity; severely affects tetramer formation by promoting formation of larger aggregates. dbSNP rs5742905. Ref.16 Ref.18 Ref.22 Ref.25 Ref.28 Ref.29 Ref.30 Ref.32 Ref.35 Ref.37 Ref.38 Ref.40 Ref.41 Ref.43 Ref.44 Ref.46 | VAR_002184 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 288 | 1 | A → P in CBSD. Ref.45 | VAR_046932 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 288 | 1 | A → T in CBSD; protein expression is comparable to wild-type; significant decrease of enzyme activity. Ref.47 | VAR_046933 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 290 | 1 | P → L in CBSD. Ref.26 Ref.28 | VAR_002185 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 302 | 1 | E → K in CBSD; 5% of activity. Ref.36 Ref.41 | VAR_008076 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 305 | 1 | G → R in CBSD. | VAR_008077 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 307 | 1 | G → S in CBSD; moderate to severe form; linked with D-534; has significantly decreased levels of enzyme activity; common mutation. Ref.18 Ref.25 Ref.30 Ref.32 Ref.35 Ref.41 Ref.43 | VAR_002186 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 320 | 1 | V → A in CBSD; has 36% of wild-type enzyme activity. Ref.30 Ref.43 | VAR_008078 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 331 | 1 | A → E in CBSD. Ref.29 Ref.41 | VAR_008079 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 331 | 1 | A → V in CBSD. Ref.25 | VAR_002187 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 336 | 1 | R → C in CBSD; protein expression is comparable to wild-type; loss of activity; absent capacity to form multimeric quaternary structure. Ref.36 Ref.41 Ref.42 Ref.47 Ref.48 | VAR_002188 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 336 | 1 | R → H in CBSD; mild form; exhibits an activity lower than 4% of the wild-type enzyme; absent capacity to form multimeric quaternary structure. Ref.48 | VAR_008080 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 338 | 1 | L → P in CBSD; severe form; exhibits an activity lower than 4% of the wild-type enzyme; absent capacity to form multimeric quaternary structure. Ref.42 Ref.48 | VAR_021797 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 347 | 1 | G → S in CBSD; protein expression is comparable to wild-type; loss of activity. Ref.41 Ref.47 | VAR_021798 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 349 | 1 | S → N in CBSD; severe form; exhibits an activity lower than 4% of the wild-type enzyme; absent capacity to form multimeric quaternary structure. Ref.42 Ref.48 | VAR_021799 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 352 | 1 | S → N in CBSD. | VAR_008081 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 353 | 1 | T → M in CBSD; protein expression is comparable to wild-type; significant decrease of enzyme activity. Ref.29 Ref.41 Ref.43 Ref.47 | VAR_008082 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 354 | 1 | V → M in CBSD. | VAR_008083 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 355 | 1 | A → P in CBSD. Ref.35 | VAR_021800 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 361 | 1 | A → T in CBSD. Ref.39 | VAR_046934 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 369 | 1 | R → C in CBSD; when linked with C-491 severe form. Ref.30 Ref.41 | VAR_008084 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 369 | 1 | R → H in CBSD. dbSNP rs11700812. | VAR_002189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 370 | 1 | C → Y in CBSD. Ref.33 | VAR_008085 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 371 | 1 | V → M in CBSD. Ref.24 Ref.41 | VAR_002190 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 376 | 1 | D → N in CBSD; has significantly decreased levels of enzyme activity. Ref.43 | VAR_046935 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 379 | 1 | R → Q in CBSD; exhibits an activity lower than 4% of the wild-type enzyme; absent capacity to form multimeric quaternary structure. Ref.42 Ref.48 | VAR_021801 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 379 | 1 | R → W in CBSD. Ref.45 | VAR_046936 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 384 | 1 | K → E in CBSD; severe form. Ref.31 | VAR_002191 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 384 | 1 | K → N in CBSD; moderate form. | VAR_008086 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 391 | 1 | M → I in CBSD. | VAR_008087 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 422 | 1 | P → L in CBSD; increased activity; does not affect tetramer formation; impaired stimulation by S-adenosylmethionine. Ref.40 | VAR_021802 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 434 | 1 | T → N in CBSD. | VAR_008088 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 435 | 1 | I → T in CBSD; does not affect activity; does not affect tetramer formation; impaired stimulation by S-adenosylmethionine. Ref.40 | VAR_008089 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 439 | 1 | R → Q in CBSD; linked with K-143. Ref.29 Ref.33 Ref.41 | VAR_008090 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 444 | 1 | D → N in CBSD; impaired stimulation by S-adenosylmethionine. Ref.27 Ref.40 | VAR_002192 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 454 | 1 | V → E in CBSD. Ref.25 | VAR_002193 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 456 | 1 | L → P in CBSD; severe; exhibits an activity lower than 4% of the wild-type enzyme; absent capacity to form multimeric quaternary structure. Ref.42 Ref.48 | VAR_021803 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 466 | 1 | S → L in CBSD; increased activity; does not affect tetramer formation; impaired stimulation by S-adenosylmethionine. Ref.40 | VAR_008091 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 491 | 1 | R → C in CBSD; linked with C-368. | VAR_008092 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 526 | 1 | Q → K in CBSD; has significantly decreased levels of enzyme activity. Ref.43 | VAR_046937 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 534 | 1 | V → D in CBSD; linked with S-306. | VAR_008093 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 539 | 1 | L → S in CBSD. Ref.31 | VAR_002194 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural variant | 548 | 1 | R → Q Presents 60% of the wild-type activity; dramatically reduced capacity to form multimeric quaternary structure. Ref.48 | VAR_046938 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Experimental info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 272 | 1 | C → A: Reduced heme content and cystathionine beta-synthase activity. Ref.14 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 275 | 1 | C → S: Reduced heme content and cystathionine beta-synthase activity. Ref.14 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 58 | 1 | R → P in CAA61252. Ref.4 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 60 – 62 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 75 – 79 | 5 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 80 – 83 | 4 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 89 – 91 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 95 – 98 | 4 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 103 – 109 | 7 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 110 – 112 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 119 – 132 | 14 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 141 – 145 | 5 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 149 – 161 | 13 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 164 – 169 | 6 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 175 – 183 | 9 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 187 – 190 | 4 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 203 – 213 | 11 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Turn | 222 – 224 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 227 – 234 | 8 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 236 – 243 | 8 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Turn | 244 – 246 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 250 – 254 | 5 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 256 – 258 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 259 – 271 | 13 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 276 – 282 | 7 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 288 – 290 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 291 – 294 | 4 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 317 – 319 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 322 – 326 | 5 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 328 – 341 | 14 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 348 – 360 | 13 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 361 – 363 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 369 – 374 | 6 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 378 – 381 | 4 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Turn | 382 – 386 | 5 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 388 – 393 | 6 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequences
| ||||||||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "Human cystathionine beta-synthase cDNA: sequence, alternative splicing and expression in cultured cells." Kraus J.P., Le K., Swaroop M., Ohura T., Tahara T., Rosenberg L.E., Roper M.D., Kozich V. Hum. Mol. Genet. 2:1633-1638(1993) [PubMed: 7903580] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). Tissue: Liver. |
| [2] | "Genomic organization of the human cystathionine beta-synthase gene: evidence for various cDNAs." Chasse J.-F., Paly E., Paris D., Paul V., Sinet P.-M., Kamoun P., London J. Biochem. Biophys. Res. Commun. 211:826-832(1995) [PubMed: 7598711] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). Tissue: Liver. |
| [3] | "A yeast system for expression of human cystathionine beta-synthase: structural and functional conservation of the human and yeast genes." Kruger W.D., Cox D.R. Proc. Natl. Acad. Sci. U.S.A. 91:6614-6618(1994) [PubMed: 8022826] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [4] | "Human cystathionine beta-synthase: gene organization and expression of different 5' alternative splicing." Chasse J.-F., Paul V., Escanez R., Kamoun P., London J. Mamm. Genome 8:917-921(1997) [PubMed: 9383285] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [5] | "The human cystathionine beta-synthase (CBS) gene: complete sequence, alternative splicing, and polymorphisms." Kraus J.P., Oliveriusova J., Sokolova J., Kraus E., Vlcek C., de Franchis R., Maclean K.N., Bao L., Bukovska G., Patterson D., Paces V., Ansorge W., Kozich V. Genomics 52:312-324(1998) [PubMed: 9790750] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], ALTERNATIVE SPLICING. |
| [6] | "Cloning of human full-length CDSs in BD Creator(TM) system donor vector." Kalnine N., Chen X., Rolfs A., Halleck A., Hines L., Eisenstein S., Koundinya M., Raphael J., Moreira D., Kelley T., LaBaer J., Lin Y., Phelan M., Farmer A. Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). |
| [7] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Brain. |
| [8] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [9] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), VARIANT PRO-69. Tissue: Brain, Eye, Lung and Muscle. |
| [10] | "Purification and properties of cystathionine beta-synthase from human liver. Evidence for identical subunits." Kraus J.P., Packman S., Fowler B., Rosenberg L.E. J. Biol. Chem. 253:6523-6528(1978) [PubMed: 681363] [Abstract] Cited for: CHARACTERIZATION. |
| [11] | "Human cystathionine beta-synthase is a target for sumoylation." Kabil O., Zhou Y., Banerjee R. Biochemistry 45:13528-13536(2006) [PubMed: 17087506] [Abstract] Cited for: SUMOYLATION AT LYS-211, SUBCELLULAR LOCATION. |
| [12] | Colinge J., Superti-Furga G., Bennett K.L. Submitted (OCT-2008) to UniProtKB Cited for: IDENTIFICATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY. |
| [13] | "Structure of human cystathionine beta-synthase: a unique pyridoxal 5'-phosphate-dependent heme protein." Meier M., Janosik M., Kery V., Kraus J.P., Burkhard P. EMBO J. 20:3910-3916(2001) [PubMed: 11483494] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.6 ANGSTROMS) OF 1-413 IN COMPLEX WITH PYRIDOXAL PHOSPHATE AND IRON, SUBUNIT. |
| [14] | "Human cystathionine beta-synthase is a heme sensor protein. Evidence that the redox sensor is heme and not the vicinal cysteines in the CXXC motif seen in the crystal structure of the truncated enzyme." Taoka S., Lepore B.W., Kabil O., Ojha S., Ringe D., Banerjee R. Biochemistry 41:10454-10461(2002) [PubMed: 12173932] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.9 ANGSTROMS) OF 45-406 IN COMPLEX WITH PYRIDOXAL PHOSPHATE AND IRON, ALLOSTERIC ACTIVATOR ADOMET, MUTAGENESIS OF CYS-272 AND CYS-275. |
| [15] | "Cystathionine beta-synthase mutations in homocystinuria." Kraus J.P., Janosik M., Kozich V., Mandell R., Shih V.E., Sperandeo M.P., Sebastio G., de Franchis R., Andria G., Kluijtmans L.A.J., Blom H.J., Boers G.H.J., Gordon R.B., Kamoun P., Tsai M.Y., Kruger W.D., Koch H.G., Ohura T., Gaustadnes M. Hum. Mutat. 13:362-375(1999) [PubMed: 10338090] [Abstract] Cited for: REVIEW ON CBSD VARIANTS. |
| [16] | "Screening for mutations by expressing patient cDNA segments in E. coli: homocystinuria due to cystathionine beta-synthase deficiency." Kozich V., Kraus J.P. Hum. Mutat. 1:113-123(1992) [PubMed: 1301198] [Abstract] Cited for: VARIANT CBSD THR-278. |
| [17] | "Molecular defect in a patient with pyridoxine-responsive homocystinuria." Kozich V., de Franchis R., Kraus J.P. Hum. Mol. Genet. 2:815-816(1993) [PubMed: 8353501] [Abstract] Cited for: VARIANTS CBSD VAL-114 AND LEU-145. |
| [18] | "Molecular basis of cystathionine beta-synthase deficiency in pyridoxine responsive and nonresponsive homocystinuria." Hu F.L., Gu Z., Kozich V., Kraus J.P., Ramesh V., Shih V.E. Hum. Mol. Genet. 2:1857-1860(1993) [PubMed: 7506602] [Abstract] Cited for: VARIANTS CBSD THR-278 AND SER-307. |
| [19] | "Identical genotypes in siblings with different homocystinuric phenotypes: identification of three mutations in cystathionine beta-synthase using an improved bacterial expression system." de Franchis R., Kozich V., McInnes R., Kraus J.P. Hum. Mol. Genet. 3:1103-1108(1994) [PubMed: 7981678] [Abstract] Cited for: VARIANTS CBSD ARG-78 AND ASN-102. |
| [20] | "Characterization of a cystathionine beta-synthase allele with three mutations in cis in a patient with B6 nonresponsive homocystinuria." Marble M., Geraghty M.T., de Franchis R., Kraus J.P., Valle D. Hum. Mol. Genet. 3:1883-1886(1994) [PubMed: 7849717] [Abstract] Cited for: VARIANTS CBSD GLN-125 AND ASP-131. |
| [21] | "Komrower Lecture. Molecular basis of phenotype expression in homocystinuria." Kraus J.P. J. Inherit. Metab. Dis. 17:383-390(1994) [PubMed: 7967489] [Abstract] Cited for: VARIANTS CBSD. |
| [22] | "A missense mutation (I278T) in the cystathionine beta-synthase gene prevalent in pyridoxine-responsive homocystinuria and associated with mild clinical phenotype." Shih V.E., Fringer J.M., Mandell R., Kraus J.P., Berry G.T., Heidenreich R.A., Korson M.S., Levy H.L., Ramesh V. Am. J. Hum. Genet. 57:34-39(1995) [PubMed: 7611293] [Abstract] Cited for: VARIANTS CBSD ARG-139; LYS-144 AND THR-278. |
| [23] | "The molecular basis of homocystinuria due to cystathionine beta-synthase deficiency in Italian families, and report of four novel mutations." Sebastio G., Sperandeo M.P., Panico M., de Franchis R., Kraus J.P., Andria G. Am. J. Hum. Genet. 56:1324-1333(1995) [PubMed: 7762555] [Abstract] Cited for: VARIANTS CBSD SER-88; GLN-125 AND MET-257. |
| [24] | "Two novel missense mutations in the cystathionine beta-synthase gene in homocystinuric patients." Kluijtmans L.A.J., Blom H.J., Boers G.H.J., van Oost B.A., Trijbels F.J.M., van den Heuvel L.P.W.J. Hum. Genet. 96:249-250(1995) [PubMed: 7635485] [Abstract] Cited for: VARIANTS CBSD TYR-165 AND MET-371. |
| [25] | "A yeast assay for functional detection of mutations in the human cystathionine beta-synthase gene." Kruger W.D., Cox D.R. Hum. Mol. Genet. 4:1155-1161(1995) [PubMed: 8528202] [Abstract] Cited for: VARIANTS CBSD MET-168; HIS-224; THR-278; SER-307; VAL-331 AND GLU-454. |
| [26] | "Molecular analysis of patients affected by homocystinuria due to cystathionine beta-synthase deficiency: report of a new mutation in exon 8 and a deletion in intron 11." Sperandeo M.P., Panico M., Pepe A., Candito M., de Franchis R., Kraus J.P., Andria G., Sebastio G. J. Inherit. Metab. Dis. 18:211-214(1995) [PubMed: 7564249] [Abstract] Cited for: VARIANT CBSD LEU-290. |
| [27] | "Defective cystathionine beta-synthase regulation by S-adenosylmethionine in a partially pyridoxine responsive homocystinuria patient." Kluijtmans L.A.J., Boers G.H.J., Stevens E.M.B., Renier W.O., Kraus J.P., Trijbels F.J.M., van den Heuvel L.P.W.J., Blom H.J. J. Clin. Invest. 98:285-289(1996) [PubMed: 8755636] [Abstract] Cited for: VARIANT CBSD ASN-444, CHARACTERIZATION OF VARIANT CBSD ASN-444. |
| [28] | "Homocysteine response to methionine challenge in four obligate heterozygotes for homocystinuria and relationship with cystathionine beta-synthase mutations." Sperandeo M.P., Candito M., Sebastio G., Rolland M.O., Turc-Carel C., Giudicelli H., Dellamonica P., Andria G. J. Inherit. Metab. Dis. 19:351-356(1996) [PubMed: 8803779] [Abstract] Cited for: VARIANTS CBSD ARG-116; THR-278 AND LEU-290. |
| [29] | "Characterisation of five missense mutations in the cystathionine beta-synthase gene from three patients with B6-nonresponsive homocystinuria." Dawson P.A., Cox A.J., Emmerson B.T., Dudman N.P.B., Kraus J.P., Gordon R.B. Eur. J. Hum. Genet. 5:15-21(1997) [PubMed: 9156316] [Abstract] Cited for: VARIANTS CBSD LYS-144; THR-278; GLU-331; MET-353 AND GLN-439. |
| [30] | "Functional modeling of vitamin responsiveness in yeast: a common pyridoxine-responsive cystathionine beta-synthase mutation in homocystinuria." Kim C.E., Gallagher P.M., Guttormsen A.B., Refsum H., Ueland P.M., Ose L., Foelling I., Whitehead A.S., Tsai M.Y., Kruger W.D. Hum. Mol. Genet. 6:2213-2221(1997) [PubMed: 9361025] [Abstract] Cited for: VARIANTS CBSD MET-262; LYS-266; THR-278; SER-307; ALA-320 AND CYS-369. |
| [31] | "Two novel mutations (K384E and L539S) in the C-terminal moiety of the cystathionine beta-synthase protein in two French pyridoxine-responsive homocystinuria patients." Aral B., Coude M., London J., Aupetit J., Chasse J.-F., Zabot M.-T., Chadefaux-Vekemans B., Kamoun P. Hum. Mutat. 9:81-82(1997) [PubMed: 8990018] [Abstract] Cited for: VARIANTS CBSD GLU-384 AND SER-539. |
| [32] | "Analysis of CBS alleles in Czech and Slovak patients with homocystinuria: report on three novel mutations E176K, W409X and 1223 + 37 del99." Kozich V., Janosik M., Sokolova J., Oliveriusova J., Orendac M., Kraus J.P., Elleder D. J. Inherit. Metab. Dis. 20:363-366(1997) [PubMed: 9266356] [Abstract] Cited for: VARIANTS CBSD LYS-176; THR-278 AND SER-307. |
| [33] | "Two novel mutations in the cystathionine beta-synthase gene of homocystinuric patients." Tsai M.Y., Wong P.W.K., Garg U., Hanson N.Q., Schwichtenberg K. Mol. Diagn. 2:129-133(1997) [PubMed: 10462600] [Abstract] Cited for: VARIANTS CBSD TYR-370 AND GLN-439. |
| [34] | "Mutational analysis of the cystathionine beta-synthase gene: a splicing mutation, two missense mutations and an insertion in patients with homocystinuria." Gordon R.B., Cox A.J., Dawson P.A., Emmerson B.T., Kraus J.P., Dudman N.P. Hum. Mutat. 11:332-332(1998) [PubMed: 10215408] [Abstract] Cited for: VARIANTS CBSD LYS-144 AND TYR-165. |
| [35] | "Characterization of mutations in the cystathionine beta-synthase gene in Irish patients with homocystinuria." Gallagher P.M., Naughten E., Hanson N.Q., Schwichtenberg K., Bignell M., Yuan M., Ward P., Yap S., Whitehead A.S., Tsai M.Y. Mol. Genet. Metab. 65:298-302(1998) [PubMed: 9889017] [Abstract] Cited for: VARIANTS CBSD PRO-101; LYS-228; MET-262; THR-278; SER-307 AND PRO-355. |
| [36] | "Four novel mutations in the cystathionine beta-synthase gene: effect of a second linked mutation on the severity of the homocystinuric phenotype." de Franchis R., Kraus E., Kozich V., Sebastio G., Kraus J.P. Hum. Mutat. 13:453-457(1999) [PubMed: 10408774] [Abstract] Cited for: VARIANTS CBSD TRP-58; VAL-126; LYS-302 AND CYS-336. |
| [37] | "Homocystinuria in the Arab population of Israel: identification of two novel mutations using DGGE analysis." Gat-Yablonski G., Mandel H., Fowler B., Taleb O., Sela B.-A. Hum. Mutat. 16:372-372(2000) [PubMed: 11013450] [Abstract] Cited for: VARIANTS CBSD GLN-102; ARG-262 AND THR-278. |
| [38] | "Impaired heme binding and aggregation of mutant cystathionine beta-synthase subunits in homocystinuria." Janosik M., Oliveriusova J., Janosikova B., Sokolova J., Kraus E., Kraus J.P., Kozich V. Am. J. Hum. Genet. 68:1506-1513(2001) [PubMed: 11359213] [Abstract] Cited for: VARIANTS CBSD ARG-65; VAL-114; LYS-144; THR-155; TYR-165; LYS-176 AND THR-278, CHARACTERIZATION OF VARIANTS CBSD VAL-114; LYS-144; THR-155; TYR-165; LYS-176 AND THR-278. |
| [39] | "Molecular genetic analysis of the cystathionine beta-synthase gene in Portuguese homocystinuria patients: three novel mutations." Castro R., Heil S.G., Rivera I., Jakobs C., de Almeida I.T., Blom H.J. Clin. Genet. 60:161-163(2001) [PubMed: 11553052] [Abstract] Cited for: VARIANTS CBSD PRO-125 AND THR-361. |
| [40] | "High homocysteine and thrombosis without connective tissue disorders are associated with a novel class of cystathionine beta-synthase (CBS) mutations." Maclean K.N., Gaustadnes M., Oliveriusova J., Janosik M., Kraus E., Kozich V., Kery V., Skovby F., Ruediger N., Ingerslev J., Stabler S.P., Allen R.H., Kraus J.P. Hum. Mutat. 19:641-655(2002) [PubMed: 12007221] [Abstract] Cited for: VARIANTS CBSD ARG-85; THR-278; LEU-422; THR-435; ASN-444 AND LEU-466, CHARACTERIZATION OF VARIANTS CBSD ARG-85; LEU-422; THR-435 AND LEU-466. |
| [41] | "The molecular basis of cystathionine beta-synthase deficiency in Australian patients: genotype-phenotype correlations and response to treatment." Gaustadnes M., Wilcken B., Oliveriusova J., McGill J., Fletcher J., Kraus J.P., Wilcken D.E. Hum. Mutat. 20:117-126(2002) [PubMed: 12124992] [Abstract] Cited for: VARIANTS CBSD LEU-49; PRO-101; ARG-109; GLN-125; LYS-144; TYR-165; LYS-228; THR-278; LYS-302; SER-307; GLU-331; CYS-336; SER-347; MET-353; CYS-369; MET-371 AND GLN-439, CHARACTERIZATION OF VARIANTS CBSD PRO-101; ARG-109; LYS-228 AND SER-347. |
| [42] | "Spectrum of CBS mutations in 16 homocystinuric patients from the iberian peninsula: high prevalence of T191M and absence of I278T or G307S." Urreizti R., Balcells S., Rodes M., Vilarinho L., Baldellou A., Couce M.L., Munoz C., Campistol J., Pinto X., Vilaseca M.A., Grinberg D. Hum. Mutat. 22:103-103(2003) [PubMed: 12815602] [Abstract] Cited for: VARIANTS CBSD TRP-125; MET-191; TYR-275; CYS-336; PRO-338; ASN-349; GLN-379 AND PRO-456. |
| [43] | "Cystathionine beta-synthase deficiency in Georgia (USA): correlation of clinical and biochemical phenotype with genotype." Kruger W.D., Wang L., Jhee K.H., Singh R.H., Elsas L.J. II Hum. Mutat. 22:434-441(2003) [PubMed: 14635102] [Abstract] Cited for: VARIANTS CBSD PRO-101; THR-226; SER-228; PRO-231; THR-278; SER-307; ALA-320; MET-353; ASN-376 AND LYS-526, CHARACTERIZATION OF VARIANTS CBSD PRO-101; THR-226; SER-228; PRO-231; THR-278; SER-307; ALA-320; MET-353; ASN-376 AND LYS-526. |
| [44] | "Identification and functional analysis of two novel mutations in the CBS gene in Polish patients with homocystinuria." Orendac M., Pronicka E., Kubalska J., Janosik M., Sokolova J., Linnebank M., Koch H.G., Kozich V. Hum. Mutat. 23:631-631(2004) [PubMed: 15146473] [Abstract] Cited for: VARIANTS CBSD MET-143; ARG-148; LYS-228 AND THR-278, CHARACTERIZATION OF VARIANTS CBSD MET-143 AND ARG-148. |
| [45] | "The cystathionine beta-synthase (CBS) mutation c.1224-2A>C in Central Europe: vitamin B6 nonresponsiveness and a common ancestral haplotype." Linnebank M., Janosik M., Kozich V., Pronicka E., Kubalska J., Sokolova J., Linnebank A., Schmidt E., Leyendecker C., Klockgether T., Kraus J.P., Koch H.G. Hum. Mutat. 24:352-353(2004) [PubMed: 15365998] [Abstract] Cited for: VARIANTS CBSD 247-LYS--GLY-256 DEL; PRO-288 AND TRP-379. |
| [46] | "Molecular analysis of homocystinuria in Brazilian patients." Porto M.P.R., Galdieri L.C., Pereira V.G., Vergani N., da Rocha J.C.C., Micheletti C., Martins A.M., Perez A.B.A., Almeida V.D. Clin. Chim. Acta 362:71-78(2005) [PubMed: 15993874] [Abstract] Cited for: VARIANTS CBSD ALA-168; MET-191 AND THR-278. |
| [47] | "Identification and functional analysis of cystathionine beta-synthase gene mutations in patients with homocystinuria." Lee S.-J., Lee D.H., Yoo H.-W., Koo S.K., Park E.-S., Park J.-W., Lim H.G., Jung S.-C. J. Hum. Genet. 50:648-654(2005) [PubMed: 16205833] [Abstract] Cited for: VARIANTS CBSD GLN-154; VAL-155; ASP-234 DEL; MET-257; THR-288; CYS-336; SER-347 AND MET-353, VARIANT CYS-18, CHARACTERIZATION OF VARIANTS CBSD GLN-154; VAL-155; ASP-234 DEL; MET-257; THR-288; CYS-336; SER-347 AND MET-353, CHARACTERIZATION OF VARIANT CYS-18. |
| [48] | "Functional assays testing pathogenicity of 14 cystathionine-beta synthase mutations." Urreizti R., Asteggiano C., Cozar M., Frank N., Vilaseca M.A., Grinberg D., Balcells S. Hum. Mutat. 27:211-211(2006) [PubMed: 16429402] [Abstract] Cited for: CHARACTERIZATION OF VARIANTS CBSD TRP-125; ARG-148; VAL-173; MET-191; THR-226; TYR-275; CYS-336; HIS-336; PRO-338; ASN-349; GLN-379 AND PRO-456, CHARACTERIZATION OF VARIANT GLN-548. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| L19501 mRNA. Translation: AAA19874.1. X82166 mRNA. Translation: CAA57656.1. L14577 mRNA. Translation: AAA98524.1. X88562 X98823 Genomic DNA. Translation: CAA61252.1. AF042836 Genomic DNA. Translation: AAC64684.1. AF042836 Genomic DNA. Translation: AAC64683.1. BT007154 mRNA. Translation: AAP35818.1. AK313691 mRNA. Translation: BAG36440.1. CH471079 Genomic DNA. Translation: EAX09508.1. BC000440 mRNA. Translation: AAH00440.1. BC007257 mRNA. Translation: AAH07257.1. BC010242 mRNA. Translation: AAH10242.1. BC011381 mRNA. Translation: AAH11381.1. | |||||||||||||||||||
| IPI | IPI00219352. IPI00219649. | ||||||||||||||||||
| PIR | A55760. | ||||||||||||||||||
| RefSeq | NP_000062.1. | ||||||||||||||||||
| UniGene | Hs.533013 | ||||||||||||||||||
3D structure databases | |||||||||||||||||||
| |||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||
| IntAct | P35520. 5 interactions. | ||||||||||||||||||
| STRING | P35520. | ||||||||||||||||||
Proteomic databases | |||||||||||||||||||
| PRIDE | P35520. | ||||||||||||||||||
Genome annotation databases | |||||||||||||||||||
| Ensembl | ENST00000352178; ENSP00000344460; ENSG00000160200; Homo sapiens. [Genome view] ENST00000359624; ENSP00000352643; ENSG00000160200; Homo sapiens. [Genome view] ENST00000398158; ENSP00000381225; ENSG00000160200; Homo sapiens. [Genome view] ENST00000398165; ENSP00000381231; ENSG00000160200; Homo sapiens. [Genome view] ENST00000398168; ENSP00000381234; ENSG00000160200; Homo sapiens. [Genome view] ENST00000430013; ENSP00000405929; ENSG00000160200; Homo sapiens. [Genome view] ENST00000441030; ENSP00000388235; ENSG00000160200; Homo sapiens. [Genome view] ENST00000451248; ENSP00000402823; ENSG00000160200; Homo sapiens. [Genome view] ENST00000458223; ENSP00000408014; ENSG00000160200; Homo sapiens. [Genome view] | ||||||||||||||||||
| GeneID | 875. | ||||||||||||||||||
| KEGG | hsa:875. | ||||||||||||||||||
| UCSC | uc002zct.1. human. | ||||||||||||||||||
Organism-specific databases | |||||||||||||||||||
| CTD | 875. | ||||||||||||||||||
| GeneCards | GC21M043346. | ||||||||||||||||||
| H-InvDB | HIX0016150. | ||||||||||||||||||
| HGNC | HGNC:1550. CBS. | ||||||||||||||||||
| HPA | HPA001223. | ||||||||||||||||||
| MIM | 236200. gene+phenotype. 603174. phenotype. | ||||||||||||||||||
| Orphanet | 394. Homocystinuria due to cystathionine beta-synthase deficiency. | ||||||||||||||||||
| PharmGKB | PA26123. | ||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| HOVERGEN | P35520. | ||||||||||||||||||
| OMA | FLSDRWM. | ||||||||||||||||||
Enzyme and pathway databases | |||||||||||||||||||
| BRENDA | 4.2.1.22. 247. | ||||||||||||||||||
Gene expression databases | |||||||||||||||||||
| ArrayExpress | P35520. | ||||||||||||||||||
| Bgee | P35520. | ||||||||||||||||||
| CleanEx | HS_CBS. | ||||||||||||||||||
| Genevestigator | P35520. | ||||||||||||||||||
| GermOnline | ENSG00000160200. Homo sapiens. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| InterPro | IPR001216. Cys_synth_BS. IPR005857. Cysta_beta_synth. IPR000644. Cysta_beta_synth_core. IPR001926. PyrdxlP-dep_enz_bsu. [Graphical view] | ||||||||||||||||||
| Pfam | PF00571. CBS. 1 hit. PF00291. PALP. 1 hit. [Graphical view] | ||||||||||||||||||
| SMART | SM00116. CBS. 1 hit. [Graphical view] | ||||||||||||||||||
| TIGRFAMs | TIGR01137. cysta_beta. 1 hit. | ||||||||||||||||||
| PROSITE | PS51371. CBS. 1 hit. PS00901. CYS_SYNTHASE. 1 hit. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Other Resources | |||||||||||||||||||
| DrugBank | DB00151. L-Cysteine. DB00133. L-Serine. DB00114. Pyridoxal Phosphate. DB00165. Pyridoxine. DB00118. S-Adenosylmethionine. | ||||||||||||||||||
| NextBio | 3642. | ||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||
Entry information
| Entry name | CBS_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P35520 Secondary accession number(s): B2R993, Q99425, Q9BWC5 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 21 Human chromosome 21: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with


