P35226 (BMI1_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 29, 2013.
Version 138.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Polycomb complex protein BMI-1 Alternative name(s): Polycomb group RING finger protein 4 RING finger protein 51 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 326 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Component of a Polycomb group (PcG) multiprotein PRC1-like complex, a complex class required to maintain the transcriptionally repressive state of many genes, including Hox genes, throughout development. PcG PRC1 complex acts via chromatin remodeling and modification of histones; it mediates monoubiquitination of histone H2A 'Lys-119', rendering chromatin heritably changed in its expressibility. In the PRC1 complex, it is required to stimulate the E3 ubiquitin-protein ligase activity of RNF2/RING2. Ref.11 Ref.14 Ref.18 |
| Subunit structure | Component of a PRC1-like complex. Interacts with RING1 and RING2 By similarity. Interacts vwith CBX7 and CBX8. Interacts with SPOP. Part of a complex consisting of BMI1, CUL3 and SPOP. Interacts with E4F1. Ref.7 Ref.8 Ref.9 Ref.10 Ref.12 Ref.14 Ref.15 Ref.17 Ref.18 |
| Subcellular location | |
| Post-translational modification | Monoubiquitinated By similarity. May be polyubiquitinated; which does not lead to proteasomal degradation. |
| Miscellaneous | The hPRC-H complex purification reported by Ref.9 probably presents a mixture of different PRC1-like complexes. |
| Sequence similarities | Contains 1 RING-type zinc finger. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| CBX4 | O00257-3 | 2 | EBI-2341576,EBI-4392727 | |
| CBX6 | O95503 | 2 | EBI-2341576,EBI-3951758 | |
| CBX7 | O95931 | 5 | EBI-2341576,EBI-3923843 | |
| CBX8 | Q9HC52 | 6 | EBI-2341576,EBI-712912 | |
| RING1 | Q06587 | 9 | EBI-2341576,EBI-752313 | |
| RNF2 | Q99496 | 5 | EBI-2341576,EBI-722416 | |
| VPS11 | Q9H270 | 2 | EBI-2341576,EBI-373380 |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||||||||||||||
Molecule processing | ||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 326 | 326 | Polycomb complex protein BMI-1 | PRO_0000055987 | ||||||||||||||||||||||||||
Regions | ||||||||||||||||||||||||||||||
| Zinc finger | 18 – 57 | 40 | RING-type | |||||||||||||||||||||||||||
| Region | 164 – 228 | 65 | Interaction with E4F1 | |||||||||||||||||||||||||||
| Motif | 81 – 95 | 15 | Nuclear localization signal Potential | |||||||||||||||||||||||||||
| Compositional bias | 251 – 326 | 76 | Pro/Ser-rich | |||||||||||||||||||||||||||
Amino acid modifications | ||||||||||||||||||||||||||||||
| Modified residue | 251 | 1 | Phosphoserine Ref.16 | |||||||||||||||||||||||||||
| Modified residue | 253 | 1 | Phosphoserine By similarity | |||||||||||||||||||||||||||
| Modified residue | 255 | 1 | Phosphoserine By similarity | |||||||||||||||||||||||||||
Natural variations | ||||||||||||||||||||||||||||||
| Natural variant | 18 | 1 | C → Y. Corresponds to variant rs1042059 [ dbSNP | Ensembl ]. | VAR_052087 | ||||||||||||||||||||||||||
Experimental info | ||||||||||||||||||||||||||||||
| Sequence conflict | 109 | 1 | G → S in AAB27059. Ref.6 | |||||||||||||||||||||||||||
| Sequence conflict | 265 | 1 | I → V in AAA19873. Ref.1 | |||||||||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||||||||||||||
| Beta strand | 6 – 8 | 3 | ||||||||||||||||||||||||||||
| Helix | 9 – 12 | 4 | ||||||||||||||||||||||||||||
| Helix | 13 – 15 | 3 | ||||||||||||||||||||||||||||
| Turn | 19 – 21 | 3 | ||||||||||||||||||||||||||||
| Beta strand | 22 – 24 | 3 | ||||||||||||||||||||||||||||
| Beta strand | 29 – 31 | 3 | ||||||||||||||||||||||||||||
| Turn | 32 – 34 | 3 | ||||||||||||||||||||||||||||
| Helix | 40 – 46 | 7 | ||||||||||||||||||||||||||||
| Turn | 54 – 56 | 3 | ||||||||||||||||||||||||||||
| Helix | 65 – 68 | 4 | ||||||||||||||||||||||||||||
| Beta strand | 69 – 71 | 3 | ||||||||||||||||||||||||||||
| Helix | 73 – 82 | 10 | ||||||||||||||||||||||||||||
| Helix | 86 – 100 | 15 | ||||||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Characterization and chromosomal localization of the human proto-oncogene BMI-1." Alkema M.J., Wiegand J., Raap A.K., Berns A., van Lohuizen M. Hum. Mol. Genet. 2:1597-1603(1993) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Tissue: Erythrocyte. |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. |
| [3] | "The DNA sequence and comparative analysis of human chromosome 10." Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J. Rogers J.Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Muscle. |
| [6] | "flvi-2, a target of retroviral insertional mutagenesis in feline thymic lymphosarcomas, encodes bmi-1." Levy L.S., Lobelle-Rich P.A., Overbaugh J. Oncogene 8:1833-1838(1993) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 12-300. Tissue: Thymus. |
| [7] | "Identification and characterization of interactions between the vertebrate polycomb-group protein BMI1 and human homologs of polyhomeotic." Gunster M.J., Satijn D.P.E., Hamer K.M., den Blaauwen J.L., de Bruijn D., Alkema M.J., van Lohuizen M., van Driel R., Otte A.P. Mol. Cell. Biol. 17:2326-2335(1997) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH PHC2. |
| [8] | "RING1 is associated with the polycomb group protein complex and acts as a transcriptional repressor." Satijn D.P.E., Gunster M.J., van der Vlag J., Hamer K.M., Schul W., Alkema M.J., Saurin A.J., Freemont P.S., van Driel R., Otte A.P. Mol. Cell. Biol. 17:4105-4113(1997) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH PHC2. |
| [9] | "The core of the polycomb repressive complex is compositionally and functionally conserved in flies and humans." Levine S.S., Weiss A., Erdjument-Bromage H., Shao Z., Tempst P., Kingston R.E. Mol. Cell. Biol. 22:6070-6078(2002) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY, IDENTIFICATION IN A PRC1-LIKE HPRC-H COMPLEX WITH CBX2; CBX4; CBX8; PHC1; PHC2; PHC3; RING1 AND RNF2. |
| [10] | "Role of histone H2A ubiquitination in Polycomb silencing." Wang H., Wang L., Erdjument-Bromage H., Vidal M., Tempst P., Jones R.S., Zhang Y. Nature 431:873-878(2004) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION IN A PRC1-LIKE COMPLEX. |
| [11] | "Role of Bmi-1 and Ring1A in H2A ubiquitylation and Hox gene silencing." Cao R., Tsukada Y., Zhang Y. Mol. Cell 20:845-854(2005) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [12] | "Stable X chromosome inactivation involves the PRC1 Polycomb complex and requires histone MACROH2A1 and the CULLIN3/SPOP ubiquitin E3 ligase." Hernandez-Munoz I., Lund A.H., van der Stoop P., Boutsma E., Muijrers I., Verhoeven E., Nusinow D.A., Panning B., Marahrens Y., van Lohuizen M. Proc. Natl. Acad. Sci. U.S.A. 102:7635-7640(2005) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH SPOP, IDENTIFICATION IN A COMPLEX WITH CUL3 AND SPOP, UBIQUITINATION. |
| [13] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [14] | "E4F1: a novel candidate factor for mediating BMI1 function in primitive hematopoietic cells." Chagraoui J., Niessen S.L., Lessard J., Girard S., Coulombe P., Sauvageau M., Meloche S., Sauvageau G. Genes Dev. 20:2110-2120(2006) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, INTERACTION WITH E4F1, SUBCELLULAR LOCATION. |
| [15] | "Several distinct polycomb complexes regulate and co-localize on the INK4a tumor suppressor locus." Maertens G.N., El Messaoudi-Aubert S., Racek T., Stock J.K., Nicholls J., Rodriguez-Niedenfuhr M., Gil J., Peters G. PLoS ONE 4:E6380-E6380(2009) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION IN A PRC1-LIKE COMPLEX, INTERACTION WITH CBX7 AND CBX8. |
| [16] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-251, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [17] | "Interaction proteomics analysis of polycomb proteins defines distinct PRC1 Complexes in mammalian cells." Vandamme J., Volkel P., Rosnoblet C., Le Faou P., Angrand P.O. Mol. Cell. Proteomics 0:0-0(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION IN A PRC1-LIKE COMPLEX, SUBCELLULAR LOCATION. |
| [18] | "Structure of a Bmi-1-Ring1B polycomb group ubiquitin ligase complex." Li Z., Cao R., Wang M., Myers M.P., Zhang Y., Xu R.M. J. Biol. Chem. 281:20643-20649(2006) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS) OF 5-101 IN COMPLEX WITH RNF2 AND ZINC IONS, FUNCTION, MASS SPECTROMETRY, SUBUNIT. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | L13689 mRNA. Translation: AAA19873.1. AK313235 mRNA. Translation: BAG36046.1. AL158211 Genomic DNA. Translation: CAI15958.1. CH471072 Genomic DNA. Translation: EAW86148.1. CH471072 Genomic DNA. Translation: EAW86150.1. CH471072 Genomic DNA. Translation: EAW86151.1. CH471072 Genomic DNA. Translation: EAW86154.1. BC011652 mRNA. Translation: AAH11652.1. AH004292 mRNA. Translation: AAB27059.1. | ||||||||||||||||||
| IPI | IPI00017299. | ||||||||||||||||||
| PIR | I54339. | ||||||||||||||||||
| RefSeq | NP_001190991.1. NM_001204062.1. NP_005171.4. NM_005180.8. | ||||||||||||||||||
| UniGene | Hs.380403. Hs.731287. | ||||||||||||||||||
3D structure databases | |||||||||||||||||||
| PDBe RCSB PDB PDBj |
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| ProteinModelPortal | P35226. | ||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||
| DIP | DIP-41879N. | ||||||||||||||||||
| IntAct | P35226. 23 interactions. | ||||||||||||||||||
| MINT | MINT-158260. | ||||||||||||||||||
| STRING | 9606.ENSP00000365851. | ||||||||||||||||||
PTM databases | |||||||||||||||||||
| PhosphoSite | P35226. | ||||||||||||||||||
Polymorphism databases | |||||||||||||||||||
| DMDM | 22258801. | ||||||||||||||||||
Proteomic databases | |||||||||||||||||||
| PaxDb | P35226. | ||||||||||||||||||
| PRIDE | P35226. | ||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||
| DNASU | 648. | ||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||
Genome annotation databases | |||||||||||||||||||
| Ensembl | ENST00000376663; ENSP00000365851; ENSG00000168283. | ||||||||||||||||||
| GeneID | 100532731. 648. | ||||||||||||||||||
| KEGG | hsa:100532731. hsa:648. | ||||||||||||||||||
| UCSC | uc001irh.3. human. | ||||||||||||||||||
Organism-specific databases | |||||||||||||||||||
| CTD | 100532731. 648. | ||||||||||||||||||
| GeneCards | GC10P022605. | ||||||||||||||||||
| HGNC | HGNC:1066. BMI1. | ||||||||||||||||||
| HPA | CAB011120. HPA030472. | ||||||||||||||||||
| MIM | 164831. gene. | ||||||||||||||||||
| neXtProt | NX_P35226. | ||||||||||||||||||
| PharmGKB | PA25376. | ||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| eggNOG | NOG304672. | ||||||||||||||||||
| HOGENOM | HOG000231945. | ||||||||||||||||||
| HOVERGEN | HBG052826. | ||||||||||||||||||
| InParanoid | P35226. | ||||||||||||||||||
| KO | K11459. | ||||||||||||||||||
| OMA | SNHQSSF. | ||||||||||||||||||
| OrthoDB | EOG4KSPKG. | ||||||||||||||||||
| PhylomeDB | P35226. | ||||||||||||||||||
Gene expression databases | |||||||||||||||||||
| ArrayExpress | P35226. | ||||||||||||||||||
| Bgee | P35226. | ||||||||||||||||||
| CleanEx | HS_BMI1. | ||||||||||||||||||
| Genevestigator | P35226. | ||||||||||||||||||
| GermOnline | ENSG00000168283. Homo sapiens. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| Gene3D | 3.30.40.10. 1 hit. | ||||||||||||||||||
| InterPro | IPR018957. Znf_C3HC4_RING-type. IPR001841. Znf_RING. IPR013083. Znf_RING/FYVE/PHD. IPR017907. Znf_RING_CS. [Graphical view] | ||||||||||||||||||
| Pfam | PF00097. zf-C3HC4. 1 hit. [Graphical view] | ||||||||||||||||||
| SMART | SM00184. RING. 1 hit. [Graphical view] | ||||||||||||||||||
| PROSITE | PS00518. ZF_RING_1. 1 hit. PS50089. ZF_RING_2. 1 hit. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Other | |||||||||||||||||||
| EvolutionaryTrace | P35226. | ||||||||||||||||||
| NextBio | 2628. | ||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||
Entry information
| Entry name | BMI1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P35226 Secondary accession number(s): Q16030, Q5T8Z3, Q96F37 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 10 Human chromosome 10: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with
