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P35219

- CAH8_HUMAN

UniProt

P35219 - CAH8_HUMAN

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Protein

Carbonic anhydrase-related protein

Gene
CA8, CALS
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

Does not have a carbonic anhydrase catalytic activity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sitei116 – 1161Ancestral zinc ligand
Metal bindingi118 – 1181Zinc Reviewed prediction
Metal bindingi141 – 1411Zinc Reviewed prediction

GO - Molecular functioni

  1. carbonate dehydratase activity Source: ProtInc
  2. zinc ion binding Source: InterPro

GO - Biological processi

  1. one-carbon metabolic process Source: InterPro
  2. phosphatidylinositol-mediated signaling Source: Ensembl
Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Carbonic anhydrase-related protein
Short name:
CARP
Alternative name(s):
Carbonic anhydrase VIII
Short name:
CA-VIII
Gene namesi
Name:CA8
Synonyms:CALS
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 8

Organism-specific databases

HGNCiHGNC:1382. CA8.

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: Ensembl
Complete GO annotation...

Pathology & Biotechi

Involvement in diseasei

Cerebellar ataxia, mental retardation, and dysequilibrium syndrome 3 (CMARQ3) [MIM:613227]: A congenital cerebellar ataxia associated with dysarthia, quadrupedal gait and mental retardation.
Note: The disease is caused by mutations affecting the gene represented in this entry.1 Publication
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti100 – 1001S → P in CMARQ3; affects protein stability owing to accelerated proteasomal degradation. 1 Publication
VAR_063634

Keywords - Diseasei

Disease mutation, Mental retardation

Organism-specific databases

MIMi613227. phenotype.
Orphaneti1766. Dysequilibrium syndrome.
PharmGKBiPA25997.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 290290Carbonic anhydrase-related proteinPRO_0000077433Add
BLAST

Proteomic databases

MaxQBiP35219.
PaxDbiP35219.
PeptideAtlasiP35219.
PRIDEiP35219.

PTM databases

PhosphoSiteiP35219.

Expressioni

Gene expression databases

ArrayExpressiP35219.
BgeeiP35219.
CleanExiHS_CA8.
GenevestigatoriP35219.

Organism-specific databases

HPAiCAB025545.
CAB047309.
HPA024748.

Interactioni

Protein-protein interaction databases

BioGridi107222. 3 interactions.
IntActiP35219. 1 interaction.
MINTiMINT-1406878.
STRINGi9606.ENSP00000314407.

Structurei

Secondary structure

1
290
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi31 – 344
Helixi37 – 393
Helixi42 – 454
Helixi56 – 583
Helixi63 – 664
Beta strandi71 – 733
Beta strandi77 – 848
Beta strandi89 – 924
Beta strandi97 – 1015
Beta strandi110 – 11910
Beta strandi128 – 1314
Beta strandi137 – 14610
Turni147 – 1493
Helixi153 – 1564
Beta strandi163 – 17412
Helixi177 – 1837
Helixi184 – 1896
Beta strandi194 – 1996
Helixi203 – 2064
Beta strandi215 – 2217
Beta strandi229 – 23810
Beta strandi240 – 2423
Helixi244 – 2507
Beta strandi254 – 2563
Beta strandi286 – 2883

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2W2JX-ray1.60A1-290[»]
ProteinModelPortaliP35219.
SMRiP35219. Positions 23-290.

Miscellaneous databases

EvolutionaryTraceiP35219.

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi15 – 3622Glu-rich (acidic)Add
BLAST

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG3338.
HOGENOMiHOG000112637.
HOVERGENiHBG002837.
InParanoidiP35219.
KOiK01672.
OMAiGHEFELH.
OrthoDBiEOG7WMCK7.
PhylomeDBiP35219.
TreeFamiTF316425.

Family and domain databases

Gene3Di3.10.200.10. 1 hit.
InterProiIPR001148. Carbonic_anhydrase_a.
IPR023561. Carbonic_anhydrase_a-class.
IPR018338. Carbonic_anhydrase_a-class_CS.
IPR018434. Carbonic_anhydrase_RP_CA8.
[Graphical view]
PANTHERiPTHR18952. PTHR18952. 1 hit.
PTHR18952:SF99. PTHR18952:SF99. 1 hit.
PfamiPF00194. Carb_anhydrase. 1 hit.
[Graphical view]
SMARTiSM01057. Carb_anhydrase. 1 hit.
[Graphical view]
SUPFAMiSSF51069. SSF51069. 1 hit.
PROSITEiPS00162. ALPHA_CA_1. 1 hit.
PS51144. ALPHA_CA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P35219-1 [UniParc]FASTAAdd to Basket

« Hide

MADLSFIEDT VAFPEKEEDE EEEEEGVEWG YEEGVEWGLV FPDANGEYQS    50
PINLNSREAR YDPSLLDVRL SPNYVVCRDC EVTNDGHTIQ VILKSKSVLS 100
GGPLPQGHEF ELYEVRFHWG RENQRGSEHT VNFKAFPMEL HLIHWNSTLF 150
GSIDEAVGKP HGIAIIALFV QIGKEHVGLK AVTEILQDIQ YKGKSKTIPC 200
FNPNTLLPDP LLRDYWVYEG SLTIPPCSEG VTWILFRYPL TISQLQIEEF 250
RRLRTHVKGA ELVEGCDGIL GDNFRPTQPL SDRVIRAAFQ 290
Length:290
Mass (Da):32,973
Last modified:January 23, 2007 - v3
Checksum:iC142711660A972DB
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti100 – 1001S → P in CMARQ3; affects protein stability owing to accelerated proteasomal degradation. 1 Publication
VAR_063634

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti106 – 1061Q → R in BAG52209. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L04656 mRNA. Translation: AAA35653.2.
AY075022 mRNA. Translation: AAL78170.1.
AK289470 mRNA. Translation: BAF82159.1.
AK314538 mRNA. Translation: BAG37128.1.
AK090655 mRNA. Translation: BAG52209.1.
CH471068 Genomic DNA. Translation: EAW86826.1.
BC069744 mRNA. Translation: AAH69744.1.
BC069794 mRNA. Translation: AAH69794.1.
BC108929 mRNA. Translation: AAI08930.1.
CCDSiCCDS6174.1.
PIRiJN0576.
RefSeqiNP_004047.3. NM_004056.4.
UniGeneiHs.654388.

Genome annotation databases

EnsembliENST00000317995; ENSP00000314407; ENSG00000178538.
GeneIDi767.
KEGGihsa:767.
UCSCiuc003xtz.1. human.

Polymorphism databases

DMDMi461681.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L04656 mRNA. Translation: AAA35653.2 .
AY075022 mRNA. Translation: AAL78170.1 .
AK289470 mRNA. Translation: BAF82159.1 .
AK314538 mRNA. Translation: BAG37128.1 .
AK090655 mRNA. Translation: BAG52209.1 .
CH471068 Genomic DNA. Translation: EAW86826.1 .
BC069744 mRNA. Translation: AAH69744.1 .
BC069794 mRNA. Translation: AAH69794.1 .
BC108929 mRNA. Translation: AAI08930.1 .
CCDSi CCDS6174.1.
PIRi JN0576.
RefSeqi NP_004047.3. NM_004056.4.
UniGenei Hs.654388.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2W2J X-ray 1.60 A 1-290 [» ]
ProteinModelPortali P35219.
SMRi P35219. Positions 23-290.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 107222. 3 interactions.
IntActi P35219. 1 interaction.
MINTi MINT-1406878.
STRINGi 9606.ENSP00000314407.

Chemistry

BindingDBi P35219.

PTM databases

PhosphoSitei P35219.

Polymorphism databases

DMDMi 461681.

Proteomic databases

MaxQBi P35219.
PaxDbi P35219.
PeptideAtlasi P35219.
PRIDEi P35219.

Protocols and materials databases

DNASUi 767.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000317995 ; ENSP00000314407 ; ENSG00000178538 .
GeneIDi 767.
KEGGi hsa:767.
UCSCi uc003xtz.1. human.

Organism-specific databases

CTDi 767.
GeneCardsi GC08M061151.
HGNCi HGNC:1382. CA8.
HPAi CAB025545.
CAB047309.
HPA024748.
MIMi 114815. gene.
613227. phenotype.
neXtProti NX_P35219.
Orphaneti 1766. Dysequilibrium syndrome.
PharmGKBi PA25997.
GenAtlasi Search...

Phylogenomic databases

eggNOGi COG3338.
HOGENOMi HOG000112637.
HOVERGENi HBG002837.
InParanoidi P35219.
KOi K01672.
OMAi GHEFELH.
OrthoDBi EOG7WMCK7.
PhylomeDBi P35219.
TreeFami TF316425.

Miscellaneous databases

ChiTaRSi CA8. human.
EvolutionaryTracei P35219.
GeneWikii CA8.
GenomeRNAii 767.
NextBioi 3102.
PROi P35219.
SOURCEi Search...

Gene expression databases

ArrayExpressi P35219.
Bgeei P35219.
CleanExi HS_CA8.
Genevestigatori P35219.

Family and domain databases

Gene3Di 3.10.200.10. 1 hit.
InterProi IPR001148. Carbonic_anhydrase_a.
IPR023561. Carbonic_anhydrase_a-class.
IPR018338. Carbonic_anhydrase_a-class_CS.
IPR018434. Carbonic_anhydrase_RP_CA8.
[Graphical view ]
PANTHERi PTHR18952. PTHR18952. 1 hit.
PTHR18952:SF99. PTHR18952:SF99. 1 hit.
Pfami PF00194. Carb_anhydrase. 1 hit.
[Graphical view ]
SMARTi SM01057. Carb_anhydrase. 1 hit.
[Graphical view ]
SUPFAMi SSF51069. SSF51069. 1 hit.
PROSITEi PS00162. ALPHA_CA_1. 1 hit.
PS51144. ALPHA_CA_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The deduced amino acid sequence of human carbonic anhydrase-related protein (CARP) is 98% identical to the mouse homologue."
    Skaggs L.A., Bergenhem N.C.H., Venta P.J., Tashian R.E.
    Gene 126:291-292(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  2. "Molecular identification of carbonic anhydrases (CA) and CA-related (CAR) genes."
    Chen Y., Huang C.-H.
    Submitted (JAN-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  3. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Cerebellum.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  5. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  6. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  7. "Crystal structure of human carbonic anhydrase-related protein VIII reveals the basis for catalytic silencing."
    Picaud S.S., Muniz J.R.C., Kramm A., Pilka E.S., Kochan G., Oppermann U., Yue W.W.
    Proteins 76:507-511(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.6 ANGSTROMS).
  8. "CA8 mutations cause a novel syndrome characterized by ataxia and mild mental retardation with predisposition to quadrupedal gait."
    Turkmen S., Guo G., Garshasbi M., Hoffmann K., Alshalah A.J., Mischung C., Kuss A., Humphrey N., Mundlos S., Robinson P.N.
    PLoS Genet. 5:E1000487-E1000487(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: VARIANT CMARQ3 PRO-100, CHARACTERIZATION OF VARIANT CMARQ3 PRO-100.

Entry informationi

Entry nameiCAH8_HUMAN
AccessioniPrimary (citable) accession number: P35219
Secondary accession number(s): A8K0A5, B3KQZ7, Q32MY2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: January 23, 2007
Last modified: July 9, 2014
This is version 127 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

Although it belongs to the alpha-carbonic anhydrase family, Arg-116 is present instead of the conserved His which is a zinc-binding residue. It is therefore expected that this protein lacks carbonic anhydrase activity.

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Human chromosome 8
    Human chromosome 8: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  6. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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