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P35087

- NBLA_SYNE7

UniProt

P35087 - NBLA_SYNE7

Protein

Phycobilisome degradation protein NblA

Gene

nblA

Organism
Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Involved in phycobilisome (PBS) degradation during nutrient deprivation. May mark the PBS for degradation by covalent association with PBS components or may disrupt the PBS via ionic interactions.

    Enzyme and pathway databases

    BioCyciSYNEL:SYNPCC7942_2127-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phycobilisome degradation protein NblA
    Gene namesi
    Name:nblA
    Ordered Locus Names:Synpcc7942_2127
    OrganismiSynechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2)
    Taxonomic identifieri1140 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
    ProteomesiUP000002717: Chromosome

    Pathology & Biotechi

    Mutagenesis

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Mutagenesisi9 – 91S → F: Nonbleaching colonies during sulfur deprivation.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 5959Phycobilisome degradation protein NblAPRO_0000096744Add
    BLAST

    Expressioni

    Inductioni

    Present at very low levels in nutrient-replete cells, and at 50-fold higher levels in nitrogen- or sulfur-deprived cells and to a variable extent (<10-fold) during phosphorus deprivation.

    Structurei

    Secondary structure

    1
    59
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi13 – 2311
    Beta strandi26 – 283
    Helixi31 – 333
    Helixi35 – 384
    Helixi40 – 5516
    Turni56 – 583

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3CS5X-ray2.20A/B/C/D1-59[»]
    ProteinModelPortaliP35087.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP35087.

    Family & Domainsi

    Sequence similaritiesi

    To chloroplast ycf18.Curated

    Phylogenomic databases

    HOGENOMiHOG000113739.
    OrthoDBiEOG64R69S.

    Family and domain databases

    Gene3Di1.10.287.670. 1 hit.
    InterProiIPR007574. NblA.
    [Graphical view]
    PfamiPF04485. NblA. 1 hit.
    [Graphical view]
    SUPFAMiSSF109859. SSF109859. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P35087-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLPPLPDFSL SVEQQFDLQK YRQQVRDISR EDLEDLFIEV VRQKMAHENI   50
    FKGMIRQGS 59
    Length:59
    Mass (Da):7,051
    Last modified:February 1, 1994 - v1
    Checksum:iD078CD76B93DDCB2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U05044 Genomic DNA. Translation: AAA89103.1.
    CP000100 Genomic DNA. Translation: ABB58157.1.
    PIRiS42636.
    RefSeqiYP_401144.1. NC_007604.1.

    Genome annotation databases

    EnsemblBacteriaiABB58157; ABB58157; Synpcc7942_2127.
    GeneIDi3773684.
    KEGGisyf:Synpcc7942_2127.
    PATRICi23789747. VBISynElo51371_2394.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U05044 Genomic DNA. Translation: AAA89103.1 .
    CP000100 Genomic DNA. Translation: ABB58157.1 .
    PIRi S42636.
    RefSeqi YP_401144.1. NC_007604.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3CS5 X-ray 2.20 A/B/C/D 1-59 [» ]
    ProteinModelPortali P35087.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABB58157 ; ABB58157 ; Synpcc7942_2127 .
    GeneIDi 3773684.
    KEGGi syf:Synpcc7942_2127.
    PATRICi 23789747. VBISynElo51371_2394.

    Phylogenomic databases

    HOGENOMi HOG000113739.
    OrthoDBi EOG64R69S.

    Enzyme and pathway databases

    BioCyci SYNEL:SYNPCC7942_2127-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei P35087.

    Family and domain databases

    Gene3Di 1.10.287.670. 1 hit.
    InterProi IPR007574. NblA.
    [Graphical view ]
    Pfami PF04485. NblA. 1 hit.
    [Graphical view ]
    SUPFAMi SSF109859. SSF109859. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "A small polypeptide triggers complete degradation of light-harvesting phycobiliproteins in nutrient-deprived cyanobacteria."
      Collier J.L., Grossman A.R.
      EMBO J. 13:1039-1047(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Complete sequence of chromosome 1 of Synechococcus elongatus PCC 7942."
      US DOE Joint Genome Institute
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P.
      Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 7942.

    Entry informationi

    Entry nameiNBLA_SYNE7
    AccessioniPrimary (citable) accession number: P35087
    Secondary accession number(s): Q31LB2
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1994
    Last sequence update: February 1, 1994
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references

    External Data

    Dasty 3