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P35087

- NBLA_SYNE7

UniProt

P35087 - NBLA_SYNE7

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Protein

Phycobilisome degradation protein NblA

Gene

nblA

Organism
Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

Involved in phycobilisome (PBS) degradation during nutrient deprivation. May mark the PBS for degradation by covalent association with PBS components or may disrupt the PBS via ionic interactions.

Enzyme and pathway databases

BioCyciSYNEL:SYNPCC7942_2127-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phycobilisome degradation protein NblA
Gene namesi
Name:nblA
Ordered Locus Names:Synpcc7942_2127
OrganismiSynechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2)
Taxonomic identifieri1140 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000002717: Chromosome

Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Mutagenesisi9 – 91S → F: Nonbleaching colonies during sulfur deprivation.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 5959Phycobilisome degradation protein NblAPRO_0000096744Add
BLAST

Expressioni

Inductioni

Present at very low levels in nutrient-replete cells, and at 50-fold higher levels in nitrogen- or sulfur-deprived cells and to a variable extent (<10-fold) during phosphorus deprivation.

Structurei

Secondary structure

1
59
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi13 – 2311
Beta strandi26 – 283
Helixi31 – 333
Helixi35 – 384
Helixi40 – 5516
Turni56 – 583

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3CS5X-ray2.20A/B/C/D1-59[»]
ProteinModelPortaliP35087.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP35087.

Family & Domainsi

Sequence similaritiesi

To chloroplast ycf18.Curated

Phylogenomic databases

HOGENOMiHOG000113739.
OrthoDBiEOG64R69S.

Family and domain databases

Gene3Di1.10.287.670. 1 hit.
InterProiIPR007574. NblA.
[Graphical view]
PfamiPF04485. NblA. 1 hit.
[Graphical view]
SUPFAMiSSF109859. SSF109859. 1 hit.

Sequencei

Sequence statusi: Complete.

P35087-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLPPLPDFSL SVEQQFDLQK YRQQVRDISR EDLEDLFIEV VRQKMAHENI

FKGMIRQGS
Length:59
Mass (Da):7,051
Last modified:February 1, 1994 - v1
Checksum:iD078CD76B93DDCB2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U05044 Genomic DNA. Translation: AAA89103.1.
CP000100 Genomic DNA. Translation: ABB58157.1.
PIRiS42636.
RefSeqiYP_401144.1. NC_007604.1.

Genome annotation databases

EnsemblBacteriaiABB58157; ABB58157; Synpcc7942_2127.
GeneIDi3773684.
KEGGisyf:Synpcc7942_2127.
PATRICi23789747. VBISynElo51371_2394.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U05044 Genomic DNA. Translation: AAA89103.1 .
CP000100 Genomic DNA. Translation: ABB58157.1 .
PIRi S42636.
RefSeqi YP_401144.1. NC_007604.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3CS5 X-ray 2.20 A/B/C/D 1-59 [» ]
ProteinModelPortali P35087.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABB58157 ; ABB58157 ; Synpcc7942_2127 .
GeneIDi 3773684.
KEGGi syf:Synpcc7942_2127.
PATRICi 23789747. VBISynElo51371_2394.

Phylogenomic databases

HOGENOMi HOG000113739.
OrthoDBi EOG64R69S.

Enzyme and pathway databases

BioCyci SYNEL:SYNPCC7942_2127-MONOMER.

Miscellaneous databases

EvolutionaryTracei P35087.

Family and domain databases

Gene3Di 1.10.287.670. 1 hit.
InterProi IPR007574. NblA.
[Graphical view ]
Pfami PF04485. NblA. 1 hit.
[Graphical view ]
SUPFAMi SSF109859. SSF109859. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "A small polypeptide triggers complete degradation of light-harvesting phycobiliproteins in nutrient-deprived cyanobacteria."
    Collier J.L., Grossman A.R.
    EMBO J. 13:1039-1047(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Complete sequence of chromosome 1 of Synechococcus elongatus PCC 7942."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P.
    Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 7942.

Entry informationi

Entry nameiNBLA_SYNE7
AccessioniPrimary (citable) accession number: P35087
Secondary accession number(s): Q31LB2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: February 1, 1994
Last modified: October 1, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

External Data

Dasty 3