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Protein

10 kDa chaperonin, mitochondrial

Gene

CPN10

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Seems to function only as a co-chaperone, along with CPN60, and in certain cases is essential for the discharge of biologically active proteins from CPN60.1 Publication

GO - Molecular functioni

  • ATP binding Source: InterPro
  • chaperone binding Source: GO_Central
  • copper ion binding Source: TAIR
  • unfolded protein binding Source: GO_Central

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Chaperone

Names & Taxonomyi

Protein namesi
Recommended name:
10 kDa chaperonin, mitochondrial
Alternative name(s):
Chaperonin 10
Short name:
CPN10
Protein groES
Gene namesi
Name:CPN10
Ordered Locus Names:At1g14980
ORF Names:T15D22.2
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G14980.

Subcellular locationi

GO - Cellular componenti

  • mitochondrial matrix Source: GO_Central
  • mitochondrion Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 17MitochondrionSequence analysisAdd BLAST17
ChainiPRO_000017492318 – 9810 kDa chaperonin, mitochondrialAdd BLAST81

Proteomic databases

PaxDbiP34893.
PRIDEiP34893.

PTM databases

iPTMnetiP34893.

Expressioni

Inductioni

By heat shock treatment.1 Publication

Gene expression databases

GenevisibleiP34893. AT.

Interactioni

Subunit structurei

Forms stable complexes with CPN60 in the presence of ATP.1 Publication

GO - Molecular functioni

Protein-protein interaction databases

BioGridi23303. 1 interactor.
MINTiMINT-8058965.
STRINGi3702.AT1G14980.1.

Structurei

3D structure databases

ProteinModelPortaliP34893.
SMRiP34893.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni18 – 94Cpn-10 domainCuratedAdd BLAST77

Sequence similaritiesi

Belongs to the GroES chaperonin family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG1641. Eukaryota.
COG0234. LUCA.
HOGENOMiHOG000133897.
InParanoidiP34893.
KOiK04078.
OMAiPGAPNKD.
OrthoDBiEOG09360XGJ.
PhylomeDBiP34893.

Family and domain databases

CDDicd00320. cpn10. 1 hit.
Gene3Di2.30.33.40. 1 hit.
InterProiIPR020818. Chaperonin_GroES.
IPR018369. Chaprnonin_Cpn10_CS.
IPR011032. GroES-like.
[Graphical view]
PANTHERiPTHR10772. PTHR10772. 1 hit.
PfamiPF00166. Cpn10. 1 hit.
[Graphical view]
PRINTSiPR00297. CHAPERONIN10.
SMARTiSM00883. Cpn10. 1 hit.
[Graphical view]
SUPFAMiSSF50129. SSF50129. 1 hit.
PROSITEiPS00681. CHAPERONINS_CPN10. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P34893-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMKRLIPTFN RILVQRVIQP AKTESGILLP EKSSKLNSGK VIAVGPGSRD
60 70 80 90
KDGKLIPVSV KEGDTVLLPE YGGTQVKLGE NEYHLFRDED VLGTLHED
Length:98
Mass (Da):10,812
Last modified:February 1, 1994 - v1
Checksum:iC405C7C342A99F27
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L02843 mRNA. Translation: AAA32767.1.
D88314 mRNA. Translation: BAA13588.2.
AC012189 Genomic DNA. Translation: AAF31020.1.
CP002684 Genomic DNA. Translation: AEE29249.1.
AY063928 mRNA. Translation: AAL36284.1.
AY091252 mRNA. Translation: AAM14191.1.
AY086708 mRNA. Translation: AAM63762.1.
PIRiS65597.
RefSeqiNP_563961.1. NM_101367.3.
UniGeneiAt.295.

Genome annotation databases

EnsemblPlantsiAT1G14980.1; AT1G14980.1; AT1G14980.
GeneIDi838063.
GrameneiAT1G14980.1; AT1G14980.1; AT1G14980.
KEGGiath:AT1G14980.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L02843 mRNA. Translation: AAA32767.1.
D88314 mRNA. Translation: BAA13588.2.
AC012189 Genomic DNA. Translation: AAF31020.1.
CP002684 Genomic DNA. Translation: AEE29249.1.
AY063928 mRNA. Translation: AAL36284.1.
AY091252 mRNA. Translation: AAM14191.1.
AY086708 mRNA. Translation: AAM63762.1.
PIRiS65597.
RefSeqiNP_563961.1. NM_101367.3.
UniGeneiAt.295.

3D structure databases

ProteinModelPortaliP34893.
SMRiP34893.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi23303. 1 interactor.
MINTiMINT-8058965.
STRINGi3702.AT1G14980.1.

PTM databases

iPTMnetiP34893.

Proteomic databases

PaxDbiP34893.
PRIDEiP34893.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G14980.1; AT1G14980.1; AT1G14980.
GeneIDi838063.
GrameneiAT1G14980.1; AT1G14980.1; AT1G14980.
KEGGiath:AT1G14980.

Organism-specific databases

TAIRiAT1G14980.

Phylogenomic databases

eggNOGiKOG1641. Eukaryota.
COG0234. LUCA.
HOGENOMiHOG000133897.
InParanoidiP34893.
KOiK04078.
OMAiPGAPNKD.
OrthoDBiEOG09360XGJ.
PhylomeDBiP34893.

Miscellaneous databases

PROiP34893.

Gene expression databases

GenevisibleiP34893. AT.

Family and domain databases

CDDicd00320. cpn10. 1 hit.
Gene3Di2.30.33.40. 1 hit.
InterProiIPR020818. Chaperonin_GroES.
IPR018369. Chaprnonin_Cpn10_CS.
IPR011032. GroES-like.
[Graphical view]
PANTHERiPTHR10772. PTHR10772. 1 hit.
PfamiPF00166. Cpn10. 1 hit.
[Graphical view]
PRINTSiPR00297. CHAPERONIN10.
SMARTiSM00883. Cpn10. 1 hit.
[Graphical view]
SUPFAMiSSF50129. SSF50129. 1 hit.
PROSITEiPS00681. CHAPERONINS_CPN10. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCH10_ARATH
AccessioniPrimary (citable) accession number: P34893
Secondary accession number(s): Q96249
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: February 1, 1994
Last modified: November 30, 2016
This is version 122 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.