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P34880

- T2S2_SHISO

UniProt

P34880 - T2S2_SHISO

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Protein

Type-2 restriction enzyme SsoII

Gene

ssoIIR

Organism
Shigella sonnei
Status
Reviewed - Annotation score: 2 out of 5- Protein predictedi

Functioni

Recognizes the double-stranded sequence CCNGG and cleaves before C-1.

Catalytic activityi

Endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates.

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA restriction-modification system Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Endonuclease, Hydrolase, Nuclease

Keywords - Biological processi

Restriction system

Protein family/group databases

REBASEi1739. SsoII.

Names & Taxonomyi

Protein namesi
Recommended name:
Type-2 restriction enzyme SsoII (EC:3.1.21.4)
Short name:
R.SsoII
Alternative name(s):
Endonuclease SsoII
Type II restriction enzyme SsoII
Gene namesi
Name:ssoIIR
Encoded oniPlasmid P40 Publication
OrganismiShigella sonnei
Taxonomic identifieri624 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeShigella

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 305305Type-2 restriction enzyme SsoIIPRO_0000077363Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliP34880.
SMRiP34880. Positions 3-305.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

InterProiIPR011335. Restrct_endonuc-II-like.
IPR015109. Restrct_endonuc_II_EcoRII_C.
[Graphical view]
PfamiPF09019. EcoRII-C. 1 hit.
[Graphical view]
SUPFAMiSSF52980. SSF52980. 1 hit.

Sequencei

Sequence statusi: Complete.

P34880-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MQRLSPGEFK TLISKERKSH FITPFALVYK TFCDLGYDQK NSDYFLNNPS
60 70 80 90 100
EYIIAMRKNC WKEFEPFEKE FTTRMLSYLI DEERIKDMSP YDAIRDFTME
110 120 130 140 150
YPTHIYDLAL SNTQSRRSRA GKEFESILEL LMMGAGIPVD VQGAIGKSFF
160 170 180 190 200
QKNQIGKLVD LVMPGVVQYT SNKRNTMLIS AKTTLRERWQ EVPEEVNRTG
210 220 230 240 250
IREMYLATLD DSFSEETINI LYEANVVVVT TIENKNFKYK NNNRVLTFED
260 270 280 290 300
MLQSAMELSR KWNNVSYTDS EKEEIQRSIL KQIEKYSDFP YVVNYYRNRL

SALFD
Length:305
Mass (Da):35,939
Last modified:February 1, 1994 - v1
Checksum:i61FDF54AB0C02D29
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M86545 Genomic DNA. Translation: AAA98280.1.
PIRiJU0156.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M86545 Genomic DNA. Translation: AAA98280.1 .
PIRi JU0156.

3D structure databases

ProteinModelPortali P34880.
SMRi P34880. Positions 3-305.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

REBASEi 1739. SsoII.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR011335. Restrct_endonuc-II-like.
IPR015109. Restrct_endonuc_II_EcoRII_C.
[Graphical view ]
Pfami PF09019. EcoRII-C. 1 hit.
[Graphical view ]
SUPFAMi SSF52980. SSF52980. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Analysis of the nucleotide and derived amino acid sequences of the SsoII restriction endonuclease and methyltransferase."
    Karyagina A.S., Lunin V.G., Degtyarenko K.N., Uvarov V.Y., Nikolskaya I.I.
    Gene 124:13-19(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 47.

Entry informationi

Entry nameiT2S2_SHISO
AccessioniPrimary (citable) accession number: P34880
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: February 1, 1994
Last modified: April 16, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Plasmid

Documents

  1. Restriction enzymes and methylases
    Classification of restriction enzymes and methylases and list of entries

External Data

Dasty 3