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Protein

RuBisCO large subunit-binding protein subunit alpha, chloroplastic

Gene
N/A
Organism
Brassica napus (Rape)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

This protein binds RuBisCO small and large subunits and is implicated in the assembly of the enzyme oligomer.

Miscellaneous

This protein shows ATPase activity.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionChaperone
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
RuBisCO large subunit-binding protein subunit alpha, chloroplastic
Alternative name(s):
60 kDa chaperonin subunit alpha
CPN-60 alpha
OrganismiBrassica napus (Rape)
Taxonomic identifieri3708 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeBrassiceaeBrassica

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 45ChloroplastBy similarityAdd BLAST45
ChainiPRO_000000501846 – 583RuBisCO large subunit-binding protein subunit alpha, chloroplasticAdd BLAST538

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei89PhosphoserineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PRIDEiP34794.

Interactioni

Subunit structurei

Oligomer of probably six alpha and six beta subunits.

Structurei

3D structure databases

ProteinModelPortaliP34794.
SMRiP34794.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the chaperonin (HSP60) family.Curated

Keywords - Domaini

Transit peptide

Family and domain databases

CDDicd03344. GroEL. 1 hit.
Gene3Di1.10.560.10. 2 hits.
3.50.7.10. 1 hit.
HAMAPiMF_00600. CH60. 1 hit.
InterProiView protein in InterPro
IPR018370. Chaperonin_Cpn60_CS.
IPR001844. Chaprnin_Cpn60.
IPR002423. Cpn60/TCP-1.
IPR037290. Cpn60/TCP-1_sf.
IPR027409. GroEL-like_apical_dom_sf.
IPR027413. GROEL-like_equatorial_sf.
PANTHERiPTHR11353. PTHR11353. 1 hit.
PfamiView protein in Pfam
PF00118. Cpn60_TCP1. 1 hit.
PRINTSiPR00298. CHAPERONIN60.
SUPFAMiSSF48592. SSF48592. 2 hits.
SSF52029. SSF52029. 1 hit.
SSF54849. SSF54849. 1 hit.
TIGRFAMsiTIGR02348. GroEL. 1 hit.
PROSITEiView protein in PROSITE
PS00296. CHAPERONINS_CPN60. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P34794-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATANALSSP SVLCSSRQGK LSGGSQQKGQ RVSYRKANRR FSLRANVKEI
60 70 80 90 100
AFDQSSRAAL QAGIDKLADA VGLTLGPRGR NVVLDEFGSP KVVNDGVTIA
110 120 130 140 150
RAIELPDAME NAGAALIREV ASKTNDSAGD GTTTASVLAR EIIKHGLLSV
160 170 180 190 200
TSGANPVSLK RGIDKTVQAL IEELEKRSRP VKGGRDIKAV ATISAGNDEL
210 220 230 240 250
IGAMIADAID KVGPDGVSPI ESSSSFETTV EVEEGMEIDR GYISPQFVTN
260 270 280 290 300
PEKLLVEFEN ARVLITDQKI TAIKDIIPIL EKTTQLRAPL LIIAEDVTGE
310 320 330 340 350
ALATLVVNKL RGVLNVVAVK APGFGERRKA MLQDIAILTE PSTALDMGLL
360 370 380 390 400
VENTTIDQLG IARKVTISKD STTLIADAAS KAELQARISQ LKKESFETDS
410 420 430 440 450
VYDSEKLAER IAKLSGGVAV IKVGAATETE LEDRKLRIED AKNATFAAIE
460 470 480 490 500
EGIVPGGGAT LVHLSTVIPA IKETFEDADV RLGADIVQKA LVAQSLIAQN
510 520 530 540 550
AGIEGEVVVE KIMFSEWELG YNAMTDTYEN LLEAGVIDPA KVTRCALQNA
560 570 580
ASVAGMVLTT QAIVVDKPKP KAPAAAAPEG LMV
Length:583
Mass (Da):61,606
Last modified:February 1, 1994 - v1
Checksum:i9EF92FF521FDB7E9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z27222 mRNA. Translation: CAA81736.1.
PIRiS38642.
RefSeqiNP_001303090.1. NM_001316161.1.
UniGeneiBna.2375.

Genome annotation databases

GeneIDi106352579.

Similar proteinsi

Entry informationi

Entry nameiRUB2_BRANA
AccessioniPrimary (citable) accession number: P34794
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: February 1, 1994
Last modified: January 31, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families