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Protein

Protein SCD5

Gene

SCD5

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Involved in vesicular transport at a late stage of the secretory pathway.

Miscellaneous

Present with 704 molecules/cell in log phase SD medium.1 Publication

GO - Molecular functioni

  • protein phosphatase 1 binding Source: SGD

GO - Biological processi

  • actin filament organization Source: SGD
  • cortical actin cytoskeleton organization Source: SGD
  • endocytosis Source: SGD
  • protein secretion Source: SGD

Keywordsi

Biological processProtein transport, Transport

Enzyme and pathway databases

BioCyciYEAST:G3O-33806-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein SCD5
Alternative name(s):
Protein FTB1
Gene namesi
Name:SCD5
Synonyms:FTB1
Ordered Locus Names:YOR329C
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome XV

Organism-specific databases

EuPathDBiFungiDB:YOR329C.
SGDiS000005856. SCD5.

Subcellular locationi

GO - Cellular componenti

  • actin cortical patch Source: SGD
  • membrane Source: UniProtKB-SubCell
  • nucleus Source: SGD

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000976211 – 872Protein SCD5Add BLAST872

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei564PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiP34758.
PRIDEiP34758.

PTM databases

iPTMnetiP34758.

Interactioni

Subunit structurei

Putative 10-formyl-tetrahydrofolate binding protein.

Binary interactionsi

WithEntry#Exp.IntActNotes
GLC7P325983EBI-16685,EBI-13715

GO - Molecular functioni

  • protein phosphatase 1 binding Source: SGD

Protein-protein interaction databases

BioGridi34714. 54 interactors.
DIPiDIP-1341N.
IntActiP34758. 7 interactors.
MINTiMINT-394108.

Structurei

3D structure databases

ProteinModelPortaliP34758.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati405 – 4241-1Add BLAST20
Repeati439 – 4581-2Add BLAST20
Repeati479 – 4981-3Add BLAST20
Repeati534 – 5452-1Add BLAST12
Repeati564 – 5752-2Add BLAST12
Repeati593 – 6042-3Add BLAST12
Repeati608 – 6192-4Add BLAST12
Repeati623 – 6342-5Add BLAST12
Repeati636 – 6472-5Add BLAST12
Repeati650 – 6612-7Add BLAST12
Repeati683 – 6942-8Add BLAST12
Repeati717 – 7282-9Add BLAST12

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni405 – 4483 X 20 AA approximate repeatsAdd BLAST44
Regioni534 – 7289 X 12 AA approximate repeatsAdd BLAST195

Keywords - Domaini

Repeat

Phylogenomic databases

HOGENOMiHOG000000799.
InParanoidiP34758.
OMAiGTGYYQQ.
OrthoDBiEOG092C4OSG.

Sequencei

Sequence statusi: Complete.

P34758-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFDWLNVPG LDLSSGDQAE KRPSNGLGPP SVSFDFGINT AAPHDSSFWD
60 70 80 90 100
QGSRSHSDTT LSYRNNHSNT AADNATNVSS PQKDNPPNGE VRTLSGGDVY
110 120 130 140 150
AESPEDMQVP LSLSQNQLTH EEIRTYLRWY HYICLRTHGK LVRLNDVFRF
160 170 180 190 200
LTNFNLSQKV KDRIVEIFRS CKNALNIGQF FAVLRLVSRA IIYGILPLRR
210 220 230 240 250
MILEKAPVPK PRPILSSENH EEVYEEVEDD DSSAKTGDQK VDFDSFASLL
260 270 280 290 300
LTGKTTRKRV RRRIKNLNFK SKKVRFSEHI TFQDPPNLNQ ESSNNSEARK
310 320 330 340 350
QDPDAEDEDQ DSNNDSPLDF TLPMDQLLKR LYKRRKNSGL VSSLPSEQQE
360 370 380 390 400
TEEEKKVLED MKDSLSHFKQ IQTVDSASLP ISSVFLQNGN TLPTSNVNNT
410 420 430 440 450
TVPQQLPLEP LKPTATGSAN HLVREEYNQG LHPSNGAIQT GLQPLKPTAT
460 470 480 490 500
GSANYLMRSH MEQPQSIKPS STPETVTNSG GLQPLKPTAT GSANYLMKQH
510 520 530 540 550
ISPSVNNPVS SMFQAQFTNQ SSSPQSTGPA FLNSPNITLP QSNQQQPYQE
560 570 580 590 600
VNPTQAKIEP SNISPQHTYS NNVRINNGNI VSMPKVEITG AFPPQNTLPQ
610 620 630 640 650
HQQSHLLSPQ NTIPQHQRSQ LISPQNTFTQ NQPILSPQHT YSNNQATMIS
660 670 680 690 700
PQNTYTNNQQ QPQHLPPPPP PRAQQQQQGA IVPPQHMYSN VQKQNNLVPT
710 720 730 740 750
QPSYTNSPSI QSPNFLSPQN AANSYFQSLL SSSPSPNPTP SNASTVNGNN
760 770 780 790 800
ASNGISSFQN TSAAMNNTQS HQTYIQQQQQ QQTQQRIYGG QLSQMQQHPG
810 820 830 840 850
QLHLNNSDIH SQPNKPNYGM LGQQVHQQQQ QQQQQFPFTA DVNRSNSSDI
860 870
LGNLQSLQQQ VDALQIQYNR RP
Length:872
Mass (Da):97,305
Last modified:February 1, 1994 - v1
Checksum:iC60F5BE8808E1D31
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U03492 mRNA. Translation: AAB09719.1.
U42227 Genomic DNA. Translation: AAA85443.1.
Z49821 Genomic DNA. Translation: CAA89976.1.
Z75237 Genomic DNA. Translation: CAA99650.1.
BK006948 Genomic DNA. Translation: DAA11092.1.
PIRiS62061.
RefSeqiNP_014974.3. NM_001183749.3.

Genome annotation databases

EnsemblFungiiYOR329C; YOR329C; YOR329C.
GeneIDi854507.
KEGGisce:YOR329C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U03492 mRNA. Translation: AAB09719.1.
U42227 Genomic DNA. Translation: AAA85443.1.
Z49821 Genomic DNA. Translation: CAA89976.1.
Z75237 Genomic DNA. Translation: CAA99650.1.
BK006948 Genomic DNA. Translation: DAA11092.1.
PIRiS62061.
RefSeqiNP_014974.3. NM_001183749.3.

3D structure databases

ProteinModelPortaliP34758.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi34714. 54 interactors.
DIPiDIP-1341N.
IntActiP34758. 7 interactors.
MINTiMINT-394108.

PTM databases

iPTMnetiP34758.

Proteomic databases

MaxQBiP34758.
PRIDEiP34758.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYOR329C; YOR329C; YOR329C.
GeneIDi854507.
KEGGisce:YOR329C.

Organism-specific databases

EuPathDBiFungiDB:YOR329C.
SGDiS000005856. SCD5.

Phylogenomic databases

HOGENOMiHOG000000799.
InParanoidiP34758.
OMAiGTGYYQQ.
OrthoDBiEOG092C4OSG.

Enzyme and pathway databases

BioCyciYEAST:G3O-33806-MONOMER.

Miscellaneous databases

PROiPR:P34758.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiSCD5_YEAST
AccessioniPrimary (citable) accession number: P34758
Secondary accession number(s): D6W326
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: February 1, 1994
Last modified: June 7, 2017
This is version 128 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome XV
    Yeast (Saccharomyces cerevisiae) chromosome XV: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.