SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

P34504

- YMV2_CAEEL

UniProt

P34504 - YMV2_CAEEL

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Uncharacterized protein K04H4.2
Gene
K04H4.2
Organism
Caenorhabditis elegans
Status
Reviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. chitin binding Source: UniProtKB-KW

GO - Biological processi

  1. chitin metabolic process Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Chitin-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein K04H4.2
Gene namesi
ORF Names:K04H4.2
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940: Chromosome III

Organism-specific databases

WormBaseiK04H4.2a; CE32463; WBGene00010573.
K04H4.2b; CE36653; WBGene00010573.
K04H4.2c; CE47897; WBGene00010573.

Subcellular locationi

GO - Cellular componenti

  1. extracellular region Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1717 Reviewed prediction
Add
BLAST
Chaini18 – 14631446Uncharacterized protein K04H4.2
PRO_0000014291Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi141 ↔ 154 By similarity

Keywords - PTMi

Disulfide bond

Proteomic databases

PaxDbiP34504.
PRIDEiP34504.

Interactioni

Protein-protein interaction databases

BioGridi41513. 5 interactions.
IntActiP34504. 11 interactions.
MINTiMINT-116825.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini94 – 16471Chitin-binding type-2
Add
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi177 – 26286Cys-rich
Add
BLAST
Compositional biasi353 – 41159Cys-rich
Add
BLAST
Compositional biasi879 – 1162284Cys-rich
Add
BLAST

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiNOG12793.
GeneTreeiENSGT00730000113271.
HOGENOMiHOG000019167.
InParanoidiP34504.
OMAiCTIDESC.

Family and domain databases

InterProiIPR007026. CC_domain.
IPR002557. Chitin-bd_dom.
IPR006150. Cys_repeat_1.
[Graphical view]
PfamiPF04942. CC. 3 hits.
[Graphical view]
SMARTiSM00494. ChtBD2. 1 hit.
SM00289. WR1. 19 hits.
[Graphical view]
SUPFAMiSSF57625. SSF57625. 1 hit.

Sequences (3)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 3 isoformsi produced by alternative splicing. Align

Isoform c (identifier: P34504-3) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MLRNLILITL LVASGHGQTP VIGGTCKLGT ADVQIGGKQT QFFLKCETTA     50
DSAEGEGVWV VKSRAAAAPS SVPSVPAENT QPQQHPKARK PASPNICEQD 100
NGARESEVCA VSATCLQAHN DFPSSYLQCD QTTLRWVRKS CQENFLFNFE 150
QQTCIVPKRM SSLSPSTSSP SNTENPCSKC PLGSACRNGN CIPLTTSNLC 200
SDGSPPNNTC TRDPYSCPKG HFCTAQKVCC PSTALQSSIG CSTVCTIDES 250
CPKGMTCQNN CCEERKLLRH PKVYRYATVE ATNTIFEVDN DIFDSAAIES 300
LPTQKPQRLD EIMAPGITPT PTRTTEPPKL RCLSSNTDEV NSLGGASSSS 350
ATCGGTNANC TSDEDCPTTF KCYQGCCKLA VCPRSLTAVK FTCKTQYHCR 400
ANEHCFFGGC CPKTIELAVI KSQVLTMSKD NEHTKETEKL IIGDCEVDTR 450
VKKCDIDIIC PEMSECVDGI CCKQPPKARC GNGLMALSIP VHCSLSDDCP 500
IASRCEYGKC CPFLSESADS TSDSVGETTP VIIKEEIIST ATKVWKKVDK 550
TSGVSINKNK CLSTQRCDLH TLCPPDFTCS LSGKCCKLNI HCPDGTVPET 600
SCQSASNHDH CPSSSHKCTL LNKEHFACCY SPGLVVEGSV TAEVSSECPI 650
GSVEVDPRFG TSCRYSLQCP SPYFCNQRGQ QASGLVCTFS SCSNSNPCSV 700
GTCNNGYCCS SGSNSGSAII DSDTNSTTNP SQPETTKTKN NTKKSNSSKK 750
HRKPKKKDVD PLSDPLLQND FPIGPPGYGF PEHLSNLDEV LIRAQGDGVS 800
CAGGFQSSLI CSVGSECPAG LHCDTAINLC CPLLLPLTDP KNPKKRKTKR 850
RKQKQDENEM EASANFPDSD PARFSSYSCG CMGGGSSNCV GCQNAPQIIT 900
IPQNSCPGGG YSVGGCSSGY CATGYSCIQN QCCPSYNSAP RISVYTCPSG 950
GNAVGACMSG RCASGYTCSN NVCCPQTTTT NPFVCPDGTQ AAGGCVNGQC 1000
GTGYTCSNGL CCAGTSTTVK CLDGSDAVGA CIPSCTGDGC GGVQVSYYCG 1050
SGYTCTTGNI CCPINSCPNG GEVLGPTING LCPTGYTVQG NLCCSATCTD 1100
GSTGLPSVNG VCIDGYSLTN GVCCPASVTC TDEISIGPCT GTGFNGGCPA 1150
GYACDSNQVN CCPVVRYTDE SCQVGPAIDG LCPPGYVVVY IPNSPLITNG 1200
VNPGTCIDLQ CTTGLCLTAN QIGDCDTATD AGTCPTGYTC FTNAGICCST 1250
TTFSRLRIGN SRQMAQKPNY GRPLHSYMPP RFGGPSSSCS DGSLSSGPCM 1300
NGLCGIGLEC QNGKCCSPSS NKPAGLLQSK CPSGDTAVSG CFPNGSCGTG 1350
YECVSSLNLC CPPGQPQTFP SFPGNNNGFN INNNNRFGSL SMSPRPIGAR 1400
CQLDGECVGQ AEGLSMCHAG VCQCSPIAYT QGIACVRRKS FQMNDDPVID 1450
AANDDKSSSS VSV 1463

Note: No experimental confirmation available.

Length:1,463
Mass (Da):153,114
Last modified:September 18, 2013 - v8
Checksum:i00A97AEFD99B3A7B
GO
Isoform b (identifier: P34504-1) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     165-165: P → R
     166-679: Missing.
     721-721: D → V
     722-882: Missing.

Note: No experimental confirmation available.

Show »
Length:788
Mass (Da):80,380
Checksum:iC0D85035108B37C1
GO
Isoform a (identifier: P34504-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     165-165: P → R
     166-679: Missing.
     721-721: D → V
     722-882: Missing.
     1281-1440: Missing.

Note: No experimental confirmation available.

Show »
Length:628
Mass (Da):64,137
Checksum:i15A4A67BF8383E9B
GO

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei165 – 1651P → R in isoform a and isoform b.
VSP_012169
Alternative sequencei166 – 679514Missing in isoform a and isoform b.
VSP_012168Add
BLAST
Alternative sequencei721 – 7211D → V in isoform a and isoform b.
VSP_026510
Alternative sequencei722 – 882161Missing in isoform a and isoform b.
VSP_026511Add
BLAST
Alternative sequencei1281 – 1440160Missing in isoform a.
VSP_002449Add
BLAST

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z27078 Genomic DNA. Translation: CAA81587.2.
Z27078 Genomic DNA. Translation: CAA81588.3.
Z27078 Genomic DNA. Translation: CAH04706.4.
PIRiB88553.
S40992.
S40994.
RefSeqiNP_001022664.4. NM_001027493.5. [P34504-3]
NP_499058.3. NM_066657.5. [P34504-1]
NP_499059.2. NM_066658.4. [P34504-2]
UniGeneiCel.24437.

Genome annotation databases

EnsemblMetazoaiK04H4.2c.1; K04H4.2c.1; WBGene00010573. [P34504-3]
K04H4.2c.2; K04H4.2c.2; WBGene00010573. [P34504-3]
K04H4.2c.3; K04H4.2c.3; WBGene00010573. [P34504-3]
GeneIDi176315.
KEGGicel:CELE_K04H4.2.
UCSCiK04H4.2a.2. c. elegans. [P34504-1]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z27078 Genomic DNA. Translation: CAA81587.2 .
Z27078 Genomic DNA. Translation: CAA81588.3 .
Z27078 Genomic DNA. Translation: CAH04706.4 .
PIRi B88553.
S40992.
S40994.
RefSeqi NP_001022664.4. NM_001027493.5. [P34504-3 ]
NP_499058.3. NM_066657.5. [P34504-1 ]
NP_499059.2. NM_066658.4. [P34504-2 ]
UniGenei Cel.24437.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 41513. 5 interactions.
IntActi P34504. 11 interactions.
MINTi MINT-116825.

Proteomic databases

PaxDbi P34504.
PRIDEi P34504.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai K04H4.2c.1 ; K04H4.2c.1 ; WBGene00010573 . [P34504-3 ]
K04H4.2c.2 ; K04H4.2c.2 ; WBGene00010573 . [P34504-3 ]
K04H4.2c.3 ; K04H4.2c.3 ; WBGene00010573 . [P34504-3 ]
GeneIDi 176315.
KEGGi cel:CELE_K04H4.2.
UCSCi K04H4.2a.2. c. elegans. [P34504-1 ]

Organism-specific databases

CTDi 176315.
WormBasei K04H4.2a ; CE32463 ; WBGene00010573 .
K04H4.2b ; CE36653 ; WBGene00010573 .
K04H4.2c ; CE47897 ; WBGene00010573 .

Phylogenomic databases

eggNOGi NOG12793.
GeneTreei ENSGT00730000113271.
HOGENOMi HOG000019167.
InParanoidi P34504.
OMAi CTIDESC.

Miscellaneous databases

NextBioi 892054.

Family and domain databases

InterProi IPR007026. CC_domain.
IPR002557. Chitin-bd_dom.
IPR006150. Cys_repeat_1.
[Graphical view ]
Pfami PF04942. CC. 3 hits.
[Graphical view ]
SMARTi SM00494. ChtBD2. 1 hit.
SM00289. WR1. 19 hits.
[Graphical view ]
SUPFAMi SSF57625. SSF57625. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.
  2. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], ALTERNATIVE SPLICING.
    Strain: Bristol N2.

Entry informationi

Entry nameiYMV2_CAEEL
AccessioniPrimary (citable) accession number: P34504
Secondary accession number(s): P34505
, P34506, P90907, Q6BEV9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: September 18, 2013
Last modified: June 11, 2014
This is version 117 of the entry and version 8 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi