Reviewed, UniProtKB/Swiss-Prot P34496 (YNA1_CAEEL)

Names and origin

Protein names

Recommended name:
    Uncharacterized protein PAR2.1

Gene names

ORF Names:

PAR2.1

Organism

Caenorhabditis elegans [Complete proteome]

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	170 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Sequence similarities

Contains 1 SSB domain.

Ontologies

Keywords
Ligand	DNA-binding
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA replication Inferred from electronic annotation. Source: InterPro
Molecular function	protein binding Inferred from physical interaction. Source: IntAct single-stranded DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
	Q17746	1	EBI-325500,EBI-313792
	Q22847	1	EBI-325500,EBI-316760
nhr-22	Q09587	1	EBI-325500,EBI-323124
W08G11.3	Q2XMY4	1	EBI-325500,EBI-325506

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 170	170	Uncharacterized protein PAR2.1		PRO_0000095993
Regions
	Domain	54 – 160	107	SSB

Sequences

	Sequence		Length	Mass (Da)
	P34496-1 [UniParc]. Last modified November 1, 1995. Version 2. Checksum: D1FA3DEA8F94ABE1	FASTA	170	19,182
	10 20 30 40 50 60 MLRSLSTISK STVRCMSLTS KMAAEQPSKQ EVDDLFAEKP QHHNPEQRRH AYSVNKVELV 70 80 90 100 110 120 GGVALDPLYK TGRNGKPYLI FNIITNSYFK QQDGTTLDQT ERHAVSVFGK QAEILSKTIK 130 140 150 160 170 KGSRLMVQGR LHYSGGQKDE QGNRTQRNTY IIAQTVQPLA RAARENPDQH

References

[1]

"2.2 Mb of contiguous nucleotide sequence from chromosome III of C. elegans." Wilson R., Ainscough R., Anderson K., Baynes C., Berks M., Bonfield J., Burton J., Connell M., Copsey T., Cooper J., Coulson A., Craxton M., Dear S., Du Z., Durbin R., Favello A., Fraser A., Fulton L. , Gardner A., Green P., Hawkins T., Hillier L., Jier M., Johnston L., Jones M., Kershaw J., Kirsten J., Laisster N., Latreille P., Lightning J., Lloyd C., Mortimore B., O'Callaghan M., Parsons J., Percy C., Rifken L., Roopra A., Saunders D., Shownkeen R., Sims M., Smaldon N., Smith A., Smith M., Sonnhammer E., Staden R., Sulston J., Thierry-Mieg J., Thomas K., Vaudin M., Vaughan K., Waterston R., Watson A., Weinstock L., Wilkinson-Sproat J., Wohldman P. Nature 368:32-38(1994) [PubMed: 7906398] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.

[2]

"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.

Cross-references

Sequence databases
EMBLGenBankDDBJ	U00025 Genomic DNA. Translation: AAA50616.1.
PIR	S44857.
RefSeq	NP_498935.1.
UniGene	Cel.10245
3D structure databases
HSSP	HSSP built from PDB template 1EYG based on UniProtKB P02339.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP:25867N.
IntAct	P34496. 4 interactions.
Genome annotation databases
Ensembl	PAR2.1. Caenorhabditis elegans. [Contig view]
GeneID	187502.
KEGG	cel:PAR2.1.
Organism-specific databases
WormBase	WBGene00019800. PAR2.1.
WormPep	PAR2.1. CE00768. [WorfDB]
Phylogenomic databases
OMA	P34496. RNTYIIA.
Gene expression databases
ArrayExpress	P34496.
Family and domain databases
InterPro	IPR012340. NA-bd_OB-fold. IPR000424. Primosome_PriB/ssb. IPR011344. ssDNA_bd. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
PANTHER	PTHR10302. Single_strand_bd. 1 hit.
Pfam	PF00436. SSB. 1 hit. [Graphical view]
TIGRFAMs	TIGR00621. ssb. 1 hit.
PROSITE	PS50935. SSB. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	935490.

Entry information

Entry name

YNA1_CAEEL

Accession

Primary (citable) accession number: P34496

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 1, 1994
Last sequence update:	November 1, 1995
Last modified:	May 5, 2009
This is version 58 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

Caenorhabditis annotation project