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P34479

- YMJ2_CAEEL

UniProt

P34479 - YMJ2_CAEEL

Protein

Putative amino acid permease F59B2.2

Gene

F59B2.2

Organism
Caenorhabditis elegans
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 92 (01 Oct 2014)
      Sequence version 2 (01 Dec 2000)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. amino acid transport Source: UniProtKB-KW

    Keywords - Biological processi

    Amino-acid transport, Transport

    Protein family/group databases

    TCDBi2.A.18.8.8. the amino acid/auxin permease (aaap) family.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative amino acid permease F59B2.2
    Gene namesi
    ORF Names:F59B2.2
    OrganismiCaenorhabditis elegans
    Taxonomic identifieri6239 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
    ProteomesiUP000001940: Chromosome III

    Organism-specific databases

    WormBaseiF59B2.2; CE20899; WBGene00010307.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 460460Putative amino acid permease F59B2.2PRO_0000093831Add
    BLAST

    Proteomic databases

    PaxDbiP34479.
    PRIDEiP34479.

    Interactioni

    Protein-protein interaction databases

    STRINGi6239.F59B2.2.

    Structurei

    3D structure databases

    ProteinModelPortaliP34479.
    ModBaseiSearch...
    MobiDBiSearch...

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei64 – 8421HelicalSequence AnalysisAdd
    BLAST
    Transmembranei132 – 15221HelicalSequence AnalysisAdd
    BLAST
    Transmembranei172 – 19221HelicalSequence AnalysisAdd
    BLAST
    Transmembranei194 – 21421HelicalSequence AnalysisAdd
    BLAST
    Transmembranei236 – 25621HelicalSequence AnalysisAdd
    BLAST
    Transmembranei270 – 29021HelicalSequence AnalysisAdd
    BLAST
    Transmembranei316 – 33621HelicalSequence AnalysisAdd
    BLAST
    Transmembranei362 – 38221HelicalSequence AnalysisAdd
    BLAST
    Transmembranei383 – 40321HelicalSequence AnalysisAdd
    BLAST
    Transmembranei426 – 44621HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG0814.
    GeneTreeiENSGT00390000011245.
    HOGENOMiHOG000018109.
    InParanoidiP34479.
    OMAiEANHRRT.
    OrthoDBiEOG73FQRD.
    PhylomeDBiP34479.

    Family and domain databases

    InterProiIPR013057. AA_transpt_TM.
    [Graphical view]
    PfamiPF01490. Aa_trans. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P34479-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSEEEGRERA VTVEGDAESM NDGRALVQPP ARSGDVITPT RAVLTLSKSM    50
    FNAGCFSLPY AWKLGGLWVS FVMSFVIAGL NWYGNHILVR ASQHLAKKSD 100
    RSALDYGHFA KKVCDYSDIR FLRNNSKAVM YFVNVTILFY QLGMCSVAIL 150
    FISDNLVNLV GDHLGGTRHQ QMILMATVSL FFILLTNMFT EMRIVSFFAL 200
    VSSVFFVIGA AVIMQYTVQQ PNQWDKLPAA TNFTGTITMI GMSMYAFEGQ 250
    TMILPIENKL DNPAAFLAPF GVLSTTMIIC TAFMTALGFF GYTGFGDSIA 300
    PTITTNVPKE GLYSTVNVFL MLQSLLGNSI AMYVVYDMFF NGFRRKFGAR 350
    FPNVPKWLSD KGFRVFWVLV TYLMAVLIPK LEIMIPLVGV TSGALCALIF 400
    PPFFEMITFW TDWKGLLTYR QRMTKIFINL VVMAIGVFAI IAGVYTNIHA 450
    IIQSFSQPDP 460
    Length:460
    Mass (Da):51,338
    Last modified:December 1, 2000 - v2
    Checksum:i0D78809A84EF15BA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z11505 Genomic DNA. Translation: CAA77582.1.
    PIRiF88544.
    S31123.
    RefSeqiNP_498989.1. NM_066588.4.
    UniGeneiCel.6066.

    Genome annotation databases

    EnsemblMetazoaiF59B2.2; F59B2.2; WBGene00010307.
    GeneIDi176271.
    KEGGicel:CELE_F59B2.2.
    UCSCiF59B2.2. c. elegans.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z11505 Genomic DNA. Translation: CAA77582.1 .
    PIRi F88544.
    S31123.
    RefSeqi NP_498989.1. NM_066588.4.
    UniGenei Cel.6066.

    3D structure databases

    ProteinModelPortali P34479.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 6239.F59B2.2.

    Protein family/group databases

    TCDBi 2.A.18.8.8. the amino acid/auxin permease (aaap) family.

    Proteomic databases

    PaxDbi P34479.
    PRIDEi P34479.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai F59B2.2 ; F59B2.2 ; WBGene00010307 .
    GeneIDi 176271.
    KEGGi cel:CELE_F59B2.2.
    UCSCi F59B2.2. c. elegans.

    Organism-specific databases

    CTDi 176271.
    WormBasei F59B2.2 ; CE20899 ; WBGene00010307 .

    Phylogenomic databases

    eggNOGi COG0814.
    GeneTreei ENSGT00390000011245.
    HOGENOMi HOG000018109.
    InParanoidi P34479.
    OMAi EANHRRT.
    OrthoDBi EOG73FQRD.
    PhylomeDBi P34479.

    Miscellaneous databases

    NextBioi 891862.

    Family and domain databases

    InterProi IPR013057. AA_transpt_TM.
    [Graphical view ]
    Pfami PF01490. Aa_trans. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Bristol N2.
    2. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
      The C. elegans sequencing consortium
      Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Bristol N2.

    Entry informationi

    Entry nameiYMJ2_CAEEL
    AccessioniPrimary (citable) accession number: P34479
    Secondary accession number(s): Q9U3E0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1994
    Last sequence update: December 1, 2000
    Last modified: October 1, 2014
    This is version 92 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programCaenorhabditis annotation project

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Caenorhabditis elegans
      Caenorhabditis elegans: entries, gene names and cross-references to WormBase
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3